Serveur d'exploration sur l'esturgeon

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Complete mitochondrial genome of sterlet (Acipenser ruthenus).

Identifieur interne : 000139 ( PubMed/Corpus ); précédent : 000138; suivant : 000140

Complete mitochondrial genome of sterlet (Acipenser ruthenus).

Auteurs : Chao Li ; Lei Cheng ; Jiong-Tang Li ; Cui-Yun Lu ; Yany Wang ; Xiao-Wen Sun

Source :

RBID : pubmed:24021000

English descriptors

Abstract

The complete mitochondrial genome of sterlet (Acipenser ruthenus) was determined in this study. The mitogenome is 16,790 bp in length and contains 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and 2 non-coding regions (the control region and the putative origin of the light strand replication) with a typical vertebrate mitochondrial gene arrangement. The overall base composition of the heavy strand is 30.26% for A, 29.00% for C, 16.23% for G and 24.51% for T, with a slight AT bias of 54.77%.

DOI: 10.3109/19401736.2013.823188
PubMed: 24021000

Links to Exploration step

pubmed:24021000

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Complete mitochondrial genome of sterlet (Acipenser ruthenus).</title>
<author>
<name sortKey="Li, Chao" sort="Li, Chao" uniqKey="Li C" first="Chao" last="Li">Chao Li</name>
<affiliation>
<nlm:affiliation>Alkali Soil Natural Environmental Science Center, Northeast Forestry University , Harbin , P. R. China .</nlm:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Cheng, Lei" sort="Cheng, Lei" uniqKey="Cheng L" first="Lei" last="Cheng">Lei Cheng</name>
</author>
<author>
<name sortKey="Li, Jiong Tang" sort="Li, Jiong Tang" uniqKey="Li J" first="Jiong-Tang" last="Li">Jiong-Tang Li</name>
</author>
<author>
<name sortKey="Lu, Cui Yun" sort="Lu, Cui Yun" uniqKey="Lu C" first="Cui-Yun" last="Lu">Cui-Yun Lu</name>
</author>
<author>
<name sortKey="Wang, Yany" sort="Wang, Yany" uniqKey="Wang Y" first="Yany" last="Wang">Yany Wang</name>
</author>
<author>
<name sortKey="Sun, Xiao Wen" sort="Sun, Xiao Wen" uniqKey="Sun X" first="Xiao-Wen" last="Sun">Xiao-Wen Sun</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2015">2015</date>
<idno type="RBID">pubmed:24021000</idno>
<idno type="pmid">24021000</idno>
<idno type="doi">10.3109/19401736.2013.823188</idno>
<idno type="wicri:Area/PubMed/Corpus">000139</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000139</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Complete mitochondrial genome of sterlet (Acipenser ruthenus).</title>
<author>
<name sortKey="Li, Chao" sort="Li, Chao" uniqKey="Li C" first="Chao" last="Li">Chao Li</name>
<affiliation>
<nlm:affiliation>Alkali Soil Natural Environmental Science Center, Northeast Forestry University , Harbin , P. R. China .</nlm:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Cheng, Lei" sort="Cheng, Lei" uniqKey="Cheng L" first="Lei" last="Cheng">Lei Cheng</name>
</author>
<author>
<name sortKey="Li, Jiong Tang" sort="Li, Jiong Tang" uniqKey="Li J" first="Jiong-Tang" last="Li">Jiong-Tang Li</name>
</author>
<author>
<name sortKey="Lu, Cui Yun" sort="Lu, Cui Yun" uniqKey="Lu C" first="Cui-Yun" last="Lu">Cui-Yun Lu</name>
</author>
<author>
<name sortKey="Wang, Yany" sort="Wang, Yany" uniqKey="Wang Y" first="Yany" last="Wang">Yany Wang</name>
</author>
<author>
<name sortKey="Sun, Xiao Wen" sort="Sun, Xiao Wen" uniqKey="Sun X" first="Xiao-Wen" last="Sun">Xiao-Wen Sun</name>
</author>
</analytic>
<series>
<title level="j">Mitochondrial DNA</title>
<idno type="eISSN">1940-1744</idno>
<imprint>
<date when="2015" type="published">2015</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Animals</term>
<term>Fishes (genetics)</term>
<term>Genes, Mitochondrial</term>
<term>Genome, Mitochondrial</term>
<term>Open Reading Frames</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>Fishes</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Animals</term>
<term>Genes, Mitochondrial</term>
<term>Genome, Mitochondrial</term>
<term>Open Reading Frames</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">The complete mitochondrial genome of sterlet (Acipenser ruthenus) was determined in this study. The mitogenome is 16,790 bp in length and contains 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and 2 non-coding regions (the control region and the putative origin of the light strand replication) with a typical vertebrate mitochondrial gene arrangement. The overall base composition of the heavy strand is 30.26% for A, 29.00% for C, 16.23% for G and 24.51% for T, with a slight AT bias of 54.77%.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="MEDLINE" Owner="NLM">
<PMID Version="1">24021000</PMID>
<DateCreated>
<Year>2015</Year>
<Month>04</Month>
<Day>03</Day>
</DateCreated>
<DateCompleted>
<Year>2015</Year>
<Month>12</Month>
<Day>17</Day>
</DateCompleted>
<DateRevised>
<Year>2015</Year>
<Month>04</Month>
<Day>03</Day>
</DateRevised>
<Article PubModel="Print-Electronic">
<Journal>
<ISSN IssnType="Electronic">1940-1744</ISSN>
<JournalIssue CitedMedium="Internet">
<Volume>26</Volume>
<Issue>2</Issue>
<PubDate>
<Year>2015</Year>
<Month>Apr</Month>
</PubDate>
</JournalIssue>
<Title>Mitochondrial DNA</Title>
<ISOAbbreviation>Mitochondrial DNA</ISOAbbreviation>
</Journal>
<ArticleTitle>Complete mitochondrial genome of sterlet (Acipenser ruthenus).</ArticleTitle>
<Pagination>
<MedlinePgn>259-60</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.3109/19401736.2013.823188</ELocationID>
<Abstract>
<AbstractText>The complete mitochondrial genome of sterlet (Acipenser ruthenus) was determined in this study. The mitogenome is 16,790 bp in length and contains 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and 2 non-coding regions (the control region and the putative origin of the light strand replication) with a typical vertebrate mitochondrial gene arrangement. The overall base composition of the heavy strand is 30.26% for A, 29.00% for C, 16.23% for G and 24.51% for T, with a slight AT bias of 54.77%.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Li</LastName>
<ForeName>Chao</ForeName>
<Initials>C</Initials>
<AffiliationInfo>
<Affiliation>Alkali Soil Natural Environmental Science Center, Northeast Forestry University , Harbin , P. R. China .</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Cheng</LastName>
<ForeName>Lei</ForeName>
<Initials>L</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Li</LastName>
<ForeName>Jiong-Tang</ForeName>
<Initials>JT</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Lu</LastName>
<ForeName>Cui-Yun</ForeName>
<Initials>CY</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Wang</LastName>
<ForeName>Yany</ForeName>
<Initials>Y</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Sun</LastName>
<ForeName>Xiao-Wen</ForeName>
<Initials>XW</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2013</Year>
<Month>09</Month>
<Day>11</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>England</Country>
<MedlineTA>Mitochondrial DNA</MedlineTA>
<NlmUniqueID>101487102</NlmUniqueID>
<ISSNLinking>1940-1736</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList>
<MeshHeading>
<DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D005399" MajorTopicYN="N">Fishes</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D050259" MajorTopicYN="N">Genes, Mitochondrial</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D054629" MajorTopicYN="Y">Genome, Mitochondrial</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D016366" MajorTopicYN="N">Open Reading Frames</DescriptorName>
</MeshHeading>
</MeshHeadingList>
<KeywordList Owner="NOTNLM">
<Keyword MajorTopicYN="N">Acipenser ruthenus</Keyword>
<Keyword MajorTopicYN="N">mitochondrial genome</Keyword>
<Keyword MajorTopicYN="N">mitogenome</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="entrez">
<Year>2013</Year>
<Month>9</Month>
<Day>12</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed">
<Year>2013</Year>
<Month>9</Month>
<Day>12</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2015</Year>
<Month>12</Month>
<Day>19</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">24021000</ArticleId>
<ArticleId IdType="doi">10.3109/19401736.2013.823188</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Eau/explor/EsturgeonV1/Data/PubMed/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000139 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd -nk 000139 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Eau
   |area=    EsturgeonV1
   |flux=    PubMed
   |étape=   Corpus
   |type=    RBID
   |clé=     pubmed:24021000
   |texte=   Complete mitochondrial genome of sterlet (Acipenser ruthenus).
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/RBID.i   -Sk "pubmed:24021000" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd   \
       | NlmPubMed2Wicri -a EsturgeonV1 

Wicri

This area was generated with Dilib version V0.6.27.
Data generation: Sat Mar 25 15:37:54 2017. Site generation: Tue Feb 13 14:18:49 2024