Serveur d'exploration sur l'esturgeon

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Complete mitochondrial genome sequences of Atlantic sturgeon, Acipenser oxyrinchus oxyrinchus, Gulf sturgeon, A. o. desotoi and European sturgeon A. sturio (Acipenseriformes: Acipenseridae) obtained through next generation sequencing.

Identifieur interne : 000059 ( PubMed/Corpus ); précédent : 000058; suivant : 000060

Complete mitochondrial genome sequences of Atlantic sturgeon, Acipenser oxyrinchus oxyrinchus, Gulf sturgeon, A. o. desotoi and European sturgeon A. sturio (Acipenseriformes: Acipenseridae) obtained through next generation sequencing.

Auteurs : Danijela Popovi ; Mateusz Baca ; Hanna Panagiotopoulou

Source :

RBID : pubmed:26017050

Abstract

Complete mitochondrial genome sequences of European sturgeon and two subspecies of the North American, Atlantic and Gulf sturgeons were determined using MiSeq Illumina technology. All three genomes show typical vertebrate organization. They possess 22 tRNA genes, 13 protein-coding genes, 2 rRNA (ribosomal RNA) genes and a non-coding control region. Excluding ND6, all protein-coding genes are on the heavy strand. The whole mitogenome sequences have been deposited in GenBank under accession numbers KP997216-KP997218.

DOI: 10.3109/19401736.2015.1038799
PubMed: 26017050

Links to Exploration step

pubmed:26017050

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Complete mitochondrial genome sequences of Atlantic sturgeon, Acipenser oxyrinchus oxyrinchus, Gulf sturgeon, A. o. desotoi and European sturgeon A. sturio (Acipenseriformes: Acipenseridae) obtained through next generation sequencing.</title>
<author>
<name sortKey="Popovi, Danijela" sort="Popovi, Danijela" uniqKey="Popovi D" first="Danijela" last="Popovi">Danijela Popovi</name>
<affiliation>
<nlm:affiliation>a Centre of New Technologies and.</nlm:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Baca, Mateusz" sort="Baca, Mateusz" uniqKey="Baca M" first="Mateusz" last="Baca">Mateusz Baca</name>
<affiliation>
<nlm:affiliation>b Center for Pre-Columbian Studies, University of Warsaw , Warsaw , Poland , and.</nlm:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Panagiotopoulou, Hanna" sort="Panagiotopoulou, Hanna" uniqKey="Panagiotopoulou H" first="Hanna" last="Panagiotopoulou">Hanna Panagiotopoulou</name>
<affiliation>
<nlm:affiliation>c Institute of Biochemistry and Biophysics, Polish Academy of Sciences , Warsaw , Poland.</nlm:affiliation>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2016">2016</date>
<idno type="RBID">pubmed:26017050</idno>
<idno type="pmid">26017050</idno>
<idno type="doi">10.3109/19401736.2015.1038799</idno>
<idno type="wicri:Area/PubMed/Corpus">000059</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000059</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Complete mitochondrial genome sequences of Atlantic sturgeon, Acipenser oxyrinchus oxyrinchus, Gulf sturgeon, A. o. desotoi and European sturgeon A. sturio (Acipenseriformes: Acipenseridae) obtained through next generation sequencing.</title>
<author>
<name sortKey="Popovi, Danijela" sort="Popovi, Danijela" uniqKey="Popovi D" first="Danijela" last="Popovi">Danijela Popovi</name>
<affiliation>
<nlm:affiliation>a Centre of New Technologies and.</nlm:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Baca, Mateusz" sort="Baca, Mateusz" uniqKey="Baca M" first="Mateusz" last="Baca">Mateusz Baca</name>
<affiliation>
<nlm:affiliation>b Center for Pre-Columbian Studies, University of Warsaw , Warsaw , Poland , and.</nlm:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Panagiotopoulou, Hanna" sort="Panagiotopoulou, Hanna" uniqKey="Panagiotopoulou H" first="Hanna" last="Panagiotopoulou">Hanna Panagiotopoulou</name>
<affiliation>
<nlm:affiliation>c Institute of Biochemistry and Biophysics, Polish Academy of Sciences , Warsaw , Poland.</nlm:affiliation>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis</title>
<idno type="eISSN">2470-1408</idno>
<imprint>
<date when="2016" type="published">2016</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Complete mitochondrial genome sequences of European sturgeon and two subspecies of the North American, Atlantic and Gulf sturgeons were determined using MiSeq Illumina technology. All three genomes show typical vertebrate organization. They possess 22 tRNA genes, 13 protein-coding genes, 2 rRNA (ribosomal RNA) genes and a non-coding control region. Excluding ND6, all protein-coding genes are on the heavy strand. The whole mitogenome sequences have been deposited in GenBank under accession numbers KP997216-KP997218.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="In-Data-Review" Owner="NLM">
<PMID Version="1">26017050</PMID>
<DateCreated>
<Year>2016</Year>
<Month>05</Month>
<Day>10</Day>
</DateCreated>
<DateRevised>
<Year>2016</Year>
<Month>05</Month>
<Day>10</Day>
</DateRevised>
<Article PubModel="Print-Electronic">
<Journal>
<ISSN IssnType="Electronic">2470-1408</ISSN>
<JournalIssue CitedMedium="Internet">
<Volume>27</Volume>
<Issue>4</Issue>
<PubDate>
<Year>2016</Year>
<Month>Jul</Month>
</PubDate>
</JournalIssue>
<Title>Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis</Title>
<ISOAbbreviation>Mitochondrial DNA A DNA Mapp Seq Anal</ISOAbbreviation>
</Journal>
<ArticleTitle>Complete mitochondrial genome sequences of Atlantic sturgeon, Acipenser oxyrinchus oxyrinchus, Gulf sturgeon, A. o. desotoi and European sturgeon A. sturio (Acipenseriformes: Acipenseridae) obtained through next generation sequencing.</ArticleTitle>
<Pagination>
<MedlinePgn>2549-51</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.3109/19401736.2015.1038799</ELocationID>
<Abstract>
<AbstractText>Complete mitochondrial genome sequences of European sturgeon and two subspecies of the North American, Atlantic and Gulf sturgeons were determined using MiSeq Illumina technology. All three genomes show typical vertebrate organization. They possess 22 tRNA genes, 13 protein-coding genes, 2 rRNA (ribosomal RNA) genes and a non-coding control region. Excluding ND6, all protein-coding genes are on the heavy strand. The whole mitogenome sequences have been deposited in GenBank under accession numbers KP997216-KP997218.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Popović</LastName>
<ForeName>Danijela</ForeName>
<Initials>D</Initials>
<AffiliationInfo>
<Affiliation>a Centre of New Technologies and.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Baca</LastName>
<ForeName>Mateusz</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>b Center for Pre-Columbian Studies, University of Warsaw , Warsaw , Poland , and.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Panagiotopoulou</LastName>
<ForeName>Hanna</ForeName>
<Initials>H</Initials>
<AffiliationInfo>
<Affiliation>c Institute of Biochemistry and Biophysics, Polish Academy of Sciences , Warsaw , Poland.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2015</Year>
<Month>05</Month>
<Day>28</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>England</Country>
<MedlineTA>Mitochondrial DNA A DNA Mapp Seq Anal</MedlineTA>
<NlmUniqueID>101679980</NlmUniqueID>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<KeywordList Owner="NOTNLM">
<Keyword MajorTopicYN="N">Acipenser o. desotoi</Keyword>
<Keyword MajorTopicYN="N">Acipenser o. oxyrinchus</Keyword>
<Keyword MajorTopicYN="N">Acipenser sturio</Keyword>
<Keyword MajorTopicYN="N">Acipenseridae</Keyword>
<Keyword MajorTopicYN="N">mitogenome</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="entrez">
<Year>2015</Year>
<Month>5</Month>
<Day>29</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed">
<Year>2015</Year>
<Month>5</Month>
<Day>29</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2015</Year>
<Month>5</Month>
<Day>29</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">26017050</ArticleId>
<ArticleId IdType="doi">10.3109/19401736.2015.1038799</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Eau/explor/EsturgeonV1/Data/PubMed/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000059 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd -nk 000059 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Eau
   |area=    EsturgeonV1
   |flux=    PubMed
   |étape=   Corpus
   |type=    RBID
   |clé=     pubmed:26017050
   |texte=   Complete mitochondrial genome sequences of Atlantic sturgeon, Acipenser oxyrinchus oxyrinchus, Gulf sturgeon, A. o. desotoi and European sturgeon A. sturio (Acipenseriformes: Acipenseridae) obtained through next generation sequencing.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/RBID.i   -Sk "pubmed:26017050" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd   \
       | NlmPubMed2Wicri -a EsturgeonV1 

Wicri

This area was generated with Dilib version V0.6.27.
Data generation: Sat Mar 25 15:37:54 2017. Site generation: Tue Feb 13 14:18:49 2024