Molecular Phylogeny of Acipenserinae
Identifieur interne : 000E11 ( Istex/Corpus ); précédent : 000E10; suivant : 000E12Molecular Phylogeny of Acipenserinae
Auteurs : Vadim J. Birstein ; Rob DesalleSource :
- Molecular Phylogenetics and Evolution [ 1055-7903 ] ; 1998.
Abstract
The family Acipenseridae consists of 25 extant sturgeon species (19 species of Acipenserinae and 6 species of Scaphirhynchinae). Together with two extant paddlefish species,Polyodon spathulaandPsephurus gladius(Polyodontidae), it composes the order Acipenseriformes, the most numerous of all living “fossil” fishes. This paper presents results of sequencing of three regions of the cytochromebgene (650 bp), and fragments of 12S (150 bp) and 16S (350 bp) rRNA genes, from all extant species of Acipenserinae (species ofAcipenserandHuso) andScaphirhynchus albus(Scaphirhynchinae). The phylogenetic tree obtained for combined data is the first comprehensive treatment of phylogeny within the Acipenserinae. Three general conclusions are inferred from the tree: (1) The pallid sturgeon,S. albus,is the sister-species of all species ofAcipenserandHuso.(2) The two species ofHusoare embedded within the genusAcipenser.It also appears thatHusois not a separate taxonomic unit. (3) There are at least three main clades withinAcipenser: A. sturio–A. oxyrinchus, A. schrenckii–A. transmontanus,and all Ponto–Caspian species plusA. dabryanusandA. brevirostrum.There is congruence between ploidy and the branching patterns of the sturgeon species. A hypothetical evolutionary history of the Acipenseriformes based on the paleontological, geological, and molecular data is discussed.
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DOI: 10.1006/mpev.1997.0443
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Birstein</name><affiliation><mods:affiliation>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</mods:affiliation></affiliation></author><author><name sortKey="Desalle, Rob" sort="Desalle, Rob" uniqKey="Desalle R" first="Rob" last="Desalle">Rob Desalle</name><affiliation><mods:affiliation>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</mods:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">ISTEX</idno><idno type="RBID">ISTEX:0AC56C17FBDC38939D702C0E718CC20F5706AA1B</idno><date when="1998" year="1998">1998</date><idno type="doi">10.1006/mpev.1997.0443</idno><idno type="url">https://api.istex.fr/document/0AC56C17FBDC38939D702C0E718CC20F5706AA1B/fulltext/pdf</idno><idno type="wicri:Area/Istex/Corpus">000E11</idno><idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Corpus" wicri:corpus="ISTEX">000E11</idno></publicationStmt><sourceDesc><biblStruct><analytic><title level="a" type="main" xml:lang="en">Molecular Phylogeny of Acipenserinae</title><author><name sortKey="Birstein, Vadim J" sort="Birstein, Vadim J" uniqKey="Birstein V" first="Vadim J." last="Birstein">Vadim J. Birstein</name><affiliation><mods:affiliation>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</mods:affiliation></affiliation></author><author><name sortKey="Desalle, Rob" sort="Desalle, Rob" uniqKey="Desalle R" first="Rob" last="Desalle">Rob Desalle</name><affiliation><mods:affiliation>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</mods:affiliation></affiliation></author></analytic><monogr></monogr><series><title level="j">Molecular Phylogenetics and Evolution</title><title level="j" type="abbrev">YMPEV</title><idno type="ISSN">1055-7903</idno><imprint><publisher>ELSEVIER</publisher><date type="published" when="1998">1998</date><biblScope unit="volume">9</biblScope><biblScope unit="issue">1</biblScope><biblScope unit="page" from="141">141</biblScope><biblScope unit="page" to="155">155</biblScope></imprint><idno type="ISSN">1055-7903</idno></series><idno type="istex">0AC56C17FBDC38939D702C0E718CC20F5706AA1B</idno><idno type="DOI">10.1006/mpev.1997.0443</idno><idno type="PII">S1055-7903(97)90443-7</idno></biblStruct></sourceDesc><seriesStmt><idno type="ISSN">1055-7903</idno></seriesStmt></fileDesc><profileDesc><textClass></textClass><langUsage><language ident="en">en</language></langUsage></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The family Acipenseridae consists of 25 extant sturgeon species (19 species of Acipenserinae and 6 species of Scaphirhynchinae). Together with two extant paddlefish species,Polyodon spathulaandPsephurus gladius(Polyodontidae), it composes the order Acipenseriformes, the most numerous of all living “fossil” fishes. This paper presents results of sequencing of three regions of the cytochromebgene (650 bp), and fragments of 12S (150 bp) and 16S (350 bp) rRNA genes, from all extant species of Acipenserinae (species ofAcipenserandHuso) andScaphirhynchus albus(Scaphirhynchinae). The phylogenetic tree obtained for combined data is the first comprehensive treatment of phylogeny within the Acipenserinae. Three general conclusions are inferred from the tree: (1) The pallid sturgeon,S. albus,is the sister-species of all species ofAcipenserandHuso.(2) The two species ofHusoare embedded within the genusAcipenser.It also appears thatHusois not a separate taxonomic unit. (3) There are at least three main clades withinAcipenser: A. sturio–A. oxyrinchus, A. schrenckii–A. transmontanus,and all Ponto–Caspian species plusA. dabryanusandA. brevirostrum.There is congruence between ploidy and the branching patterns of the sturgeon species. A hypothetical evolutionary history of the Acipenseriformes based on the paleontological, geological, and molecular data is discussed.</div></front></TEI><istex><corpusName>elsevier</corpusName><author><json:item><name>Vadim J. Birstein</name><affiliations><json:string>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</json:string></affiliations></json:item><json:item><name>Rob DeSalle</name><affiliations><json:string>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</json:string></affiliations></json:item></author><language><json:string>eng</json:string></language><originalGenre><json:string>Full-length article</json:string></originalGenre><abstract>The family Acipenseridae consists of 25 extant sturgeon species (19 species of Acipenserinae and 6 species of Scaphirhynchinae). Together with two extant paddlefish species,Polyodon spathulaandPsephurus gladius(Polyodontidae), it composes the order Acipenseriformes, the most numerous of all living “fossil” fishes. This paper presents results of sequencing of three regions of the cytochromebgene (650 bp), and fragments of 12S (150 bp) and 16S (350 bp) rRNA genes, from all extant species of Acipenserinae (species ofAcipenserandHuso) andScaphirhynchus albus(Scaphirhynchinae). The phylogenetic tree obtained for combined data is the first comprehensive treatment of phylogeny within the Acipenserinae. Three general conclusions are inferred from the tree: (1) The pallid sturgeon,S. albus,is the sister-species of all species ofAcipenserandHuso.(2) The two species ofHusoare embedded within the genusAcipenser.It also appears thatHusois not a separate taxonomic unit. (3) There are at least three main clades withinAcipenser: A. sturio–A. oxyrinchus, A. schrenckii–A. transmontanus,and all Ponto–Caspian species plusA. dabryanusandA. brevirostrum.There is congruence between ploidy and the branching patterns of the sturgeon species. A hypothetical evolutionary history of the Acipenseriformes based on the paleontological, geological, and molecular data is discussed.</abstract><qualityIndicators><score>7.124</score><pdfVersion>1.1</pdfVersion><pdfPageSize>554 x 764 pts</pdfPageSize><refBibsNative>true</refBibsNative><keywordCount>0</keywordCount><abstractCharCount>1371</abstractCharCount><pdfWordCount>9626</pdfWordCount><pdfCharCount>61728</pdfCharCount><pdfPageCount>15</pdfPageCount><abstractWordCount>177</abstractWordCount></qualityIndicators><title>Molecular Phylogeny of Acipenserinae</title><pii><json:string>S1055-7903(97)90443-7</json:string></pii><genre><json:string>research-article</json:string></genre><host><volume>9</volume><pii><json:string>S1055-7903(00)X0042-5</json:string></pii><pages><last>155</last><first>141</first></pages><issn><json:string>1055-7903</json:string></issn><issue>1</issue><genre><json:string>journal</json:string></genre><language><json:string>unknown</json:string></language><title>Molecular Phylogenetics and Evolution</title><publicationDate>1998</publicationDate></host><categories><wos><json:string>science</json:string><json:string>genetics & heredity</json:string><json:string>evolutionary biology</json:string><json:string>biochemistry & molecular biology</json:string></wos><scienceMetrix><json:string>natural sciences</json:string><json:string>biology</json:string><json:string>evolutionary biology</json:string></scienceMetrix></categories><publicationDate>1998</publicationDate><copyrightDate>1998</copyrightDate><doi><json:string>10.1006/mpev.1997.0443</json:string></doi><id>0AC56C17FBDC38939D702C0E718CC20F5706AA1B</id><score>0.49336416</score><fulltext><json:item><extension>pdf</extension><original>true</original><mimetype>application/pdf</mimetype><uri>https://api.istex.fr/document/0AC56C17FBDC38939D702C0E718CC20F5706AA1B/fulltext/pdf</uri></json:item><json:item><extension>zip</extension><original>false</original><mimetype>application/zip</mimetype><uri>https://api.istex.fr/document/0AC56C17FBDC38939D702C0E718CC20F5706AA1B/fulltext/zip</uri></json:item><istex:fulltextTEI uri="https://api.istex.fr/document/0AC56C17FBDC38939D702C0E718CC20F5706AA1B/fulltext/tei"><teiHeader><fileDesc><titleStmt><title level="a" type="main" xml:lang="en">Molecular Phylogeny of Acipenserinae</title></titleStmt><publicationStmt><authority>ISTEX</authority><publisher>ELSEVIER</publisher><availability><p>©1998 Academic Press</p></availability><date>1998</date></publicationStmt><notesStmt><note>L. 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Cocks</note><note type="content">Section title: Regular Article</note></notesStmt><sourceDesc><biblStruct type="inbook"><analytic><title level="a" type="main" xml:lang="en">Molecular Phylogeny of Acipenserinae</title><author xml:id="author-1"><persName><forename type="first">Vadim J.</forename><surname>Birstein</surname></persName><affiliation>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</affiliation></author><author xml:id="author-2"><persName><forename type="first">Rob</forename><surname>DeSalle</surname></persName><affiliation>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</affiliation></author></analytic><monogr><title level="j">Molecular Phylogenetics and Evolution</title><title level="j" type="abbrev">YMPEV</title><idno type="pISSN">1055-7903</idno><idno type="PII">S1055-7903(00)X0042-5</idno><imprint><publisher>ELSEVIER</publisher><date type="published" when="1998"></date><biblScope unit="volume">9</biblScope><biblScope unit="issue">1</biblScope><biblScope unit="page" from="141">141</biblScope><biblScope unit="page" to="155">155</biblScope></imprint></monogr><idno type="istex">0AC56C17FBDC38939D702C0E718CC20F5706AA1B</idno><idno type="DOI">10.1006/mpev.1997.0443</idno><idno type="PII">S1055-7903(97)90443-7</idno></biblStruct></sourceDesc></fileDesc><profileDesc><creation><date>1998</date></creation><langUsage><language ident="en">en</language></langUsage><abstract xml:lang="en"><p>The family Acipenseridae consists of 25 extant sturgeon species (19 species of Acipenserinae and 6 species of Scaphirhynchinae). Together with two extant paddlefish species,Polyodon spathulaandPsephurus gladius(Polyodontidae), it composes the order Acipenseriformes, the most numerous of all living “fossil” fishes. This paper presents results of sequencing of three regions of the cytochromebgene (650 bp), and fragments of 12S (150 bp) and 16S (350 bp) rRNA genes, from all extant species of Acipenserinae (species ofAcipenserandHuso) andScaphirhynchus albus(Scaphirhynchinae). The phylogenetic tree obtained for combined data is the first comprehensive treatment of phylogeny within the Acipenserinae. Three general conclusions are inferred from the tree: (1) The pallid sturgeon,S. albus,is the sister-species of all species ofAcipenserandHuso.(2) The two species ofHusoare embedded within the genusAcipenser.It also appears thatHusois not a separate taxonomic unit. (3) There are at least three main clades withinAcipenser: A. sturio–A. oxyrinchus, A. schrenckii–A. transmontanus,and all Ponto–Caspian species plusA. dabryanusandA. brevirostrum.There is congruence between ploidy and the branching patterns of the sturgeon species. A hypothetical evolutionary history of the Acipenseriformes based on the paleontological, geological, and molecular data is discussed.</p></abstract></profileDesc><revisionDesc><change when="1997-05-23">Modified</change><change when="1998">Published</change></revisionDesc></teiHeader></istex:fulltextTEI><json:item><extension>txt</extension><original>false</original><mimetype>text/plain</mimetype><uri>https://api.istex.fr/document/0AC56C17FBDC38939D702C0E718CC20F5706AA1B/fulltext/txt</uri></json:item></fulltext><metadata><istex:metadataXml wicri:clean="Elsevier, elements deleted: tail"><istex:xmlDeclaration>version="1.0" encoding="utf-8"</istex:xmlDeclaration><istex:docType PUBLIC="-//ES//DTD journal article DTD version 4.5.2//EN//XML" URI="art452.dtd" name="istex:docType"></istex:docType><istex:document><converted-article version="4.5.2" docsubtype="fla" xml:lang="en"><item-info><jid>YMPEV</jid><aid>90443</aid><ce:pii>S1055-7903(97)90443-7</ce:pii><ce:doi>10.1006/mpev.1997.0443</ce:doi><ce:copyright type="full-transfer" year="1998">Academic Press</ce:copyright></item-info><head><ce:article-footnote><ce:label>☆</ce:label><ce:note-para>L. R. M. Cocks</ce:note-para></ce:article-footnote><ce:dochead><ce:textfn>Regular Article</ce:textfn></ce:dochead><ce:title>Molecular Phylogeny of Acipenserinae</ce:title><ce:author-group><ce:author><ce:given-name>Vadim J.</ce:given-name><ce:surname>Birstein</ce:surname></ce:author><ce:author><ce:given-name>Rob</ce:given-name><ce:surname>DeSalle</ce:surname></ce:author><ce:affiliation><ce:textfn>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</ce:textfn></ce:affiliation></ce:author-group><ce:date-received day="6" month="8" year="1996"></ce:date-received><ce:date-revised day="23" month="5" year="1997"></ce:date-revised><ce:abstract><ce:section-title>Abstract</ce:section-title><ce:abstract-sec><ce:simple-para>The family Acipenseridae consists of 25 extant sturgeon species (19 species of Acipenserinae and 6 species of Scaphirhynchinae). Together with two extant paddlefish species,<ce:italic>Polyodon spathula</ce:italic>and<ce:italic>Psephurus gladius</ce:italic>(Polyodontidae), it composes the order Acipenseriformes, the most numerous of all living “fossil” fishes. This paper presents results of sequencing of three regions of the cytochrome<ce:italic>b</ce:italic>gene (650 bp), and fragments of 12S (150 bp) and 16S (350 bp) rRNA genes, from all extant species of Acipenserinae (species of<ce:italic>Acipenser</ce:italic>and<ce:italic>Huso</ce:italic>) and<ce:italic>Scaphirhynchus albus</ce:italic>(Scaphirhynchinae). The phylogenetic tree obtained for combined data is the first comprehensive treatment of phylogeny within the Acipenserinae. Three general conclusions are inferred from the tree: (1) The pallid sturgeon,<ce:italic>S. albus,</ce:italic>is the sister-species of all species of<ce:italic>Acipenser</ce:italic>and<ce:italic>Huso.</ce:italic>(2) The two species of<ce:italic>Huso</ce:italic>are embedded within the genus<ce:italic>Acipenser.</ce:italic>It also appears that<ce:italic>Huso</ce:italic>is not a separate taxonomic unit. (3) There are at least three main clades within<ce:italic>Acipenser: A. sturio–A. oxyrinchus, A. schrenckii–A. transmontanus,</ce:italic>and all Ponto–Caspian species plus<ce:italic>A. dabryanus</ce:italic>and<ce:italic>A. brevirostrum.</ce:italic>There is congruence between ploidy and the branching patterns of the sturgeon species. A hypothetical evolutionary history of the Acipenseriformes based on the paleontological, geological, and molecular data is discussed.</ce:simple-para></ce:abstract-sec></ce:abstract></head></converted-article></istex:document></istex:metadataXml><mods version="3.6"><titleInfo lang="en"><title>Molecular Phylogeny of Acipenserinae</title></titleInfo><titleInfo type="alternative" lang="en" contentType="CDATA"><title>Molecular Phylogeny of Acipenserinae</title></titleInfo><name type="personal"><namePart type="given">Vadim J.</namePart><namePart type="family">Birstein</namePart><affiliation>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">Rob</namePart><namePart type="family">DeSalle</namePart><affiliation>American Museum of Natural History, Central Park West at 79th Street, New York, New York, 10024</affiliation><role><roleTerm type="text">author</roleTerm></role></name><typeOfResource>text</typeOfResource><genre type="research-article" displayLabel="Full-length article"></genre><originInfo><publisher>ELSEVIER</publisher><dateIssued encoding="w3cdtf">1998</dateIssued><dateModified encoding="w3cdtf">1997-05-23</dateModified><copyrightDate encoding="w3cdtf">1998</copyrightDate></originInfo><language><languageTerm type="code" authority="iso639-2b">eng</languageTerm><languageTerm type="code" authority="rfc3066">en</languageTerm></language><physicalDescription><internetMediaType>text/html</internetMediaType></physicalDescription><abstract lang="en">The family Acipenseridae consists of 25 extant sturgeon species (19 species of Acipenserinae and 6 species of Scaphirhynchinae). Together with two extant paddlefish species,Polyodon spathulaandPsephurus gladius(Polyodontidae), it composes the order Acipenseriformes, the most numerous of all living “fossil” fishes. This paper presents results of sequencing of three regions of the cytochromebgene (650 bp), and fragments of 12S (150 bp) and 16S (350 bp) rRNA genes, from all extant species of Acipenserinae (species ofAcipenserandHuso) andScaphirhynchus albus(Scaphirhynchinae). The phylogenetic tree obtained for combined data is the first comprehensive treatment of phylogeny within the Acipenserinae. Three general conclusions are inferred from the tree: (1) The pallid sturgeon,S. albus,is the sister-species of all species ofAcipenserandHuso.(2) The two species ofHusoare embedded within the genusAcipenser.It also appears thatHusois not a separate taxonomic unit. (3) There are at least three main clades withinAcipenser: A. sturio–A. oxyrinchus, A. schrenckii–A. transmontanus,and all Ponto–Caspian species plusA. dabryanusandA. brevirostrum.There is congruence between ploidy and the branching patterns of the sturgeon species. A hypothetical evolutionary history of the Acipenseriformes based on the paleontological, geological, and molecular data is discussed.</abstract><note>L. R. M. Cocks</note><note type="content">Section title: Regular Article</note><relatedItem type="host"><titleInfo><title>Molecular Phylogenetics and Evolution</title></titleInfo><titleInfo type="abbreviated"><title>YMPEV</title></titleInfo><genre type="journal">journal</genre><originInfo><dateIssued encoding="w3cdtf">199802</dateIssued></originInfo><identifier type="ISSN">1055-7903</identifier><identifier type="PII">S1055-7903(00)X0042-5</identifier><part><date>199802</date><detail type="volume"><number>9</number><caption>vol.</caption></detail><detail type="issue"><number>1</number><caption>no.</caption></detail><extent unit="issue pages"><start>1</start><end>181</end></extent><extent unit="pages"><start>141</start><end>155</end></extent></part></relatedItem><identifier type="istex">0AC56C17FBDC38939D702C0E718CC20F5706AA1B</identifier><identifier type="DOI">10.1006/mpev.1997.0443</identifier><identifier type="PII">S1055-7903(97)90443-7</identifier><accessCondition type="use and reproduction" contentType="copyright">©1998 Academic Press</accessCondition><recordInfo><recordContentSource>ELSEVIER</recordContentSource><recordOrigin>Academic Press, ©1998</recordOrigin></recordInfo></mods></metadata><serie></serie></istex></record>Pour manipuler ce document sous Unix (Dilib)
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