Transcriptomic Response of Purple Willow (Salix purpurea) to Arsenic Stress.
Identifieur interne : 000907 ( Main/Corpus ); précédent : 000906; suivant : 000908Transcriptomic Response of Purple Willow (Salix purpurea) to Arsenic Stress.
Auteurs : Aymeric Yanitch ; Nicholas J B. Brereton ; Emmanuel Gonzalez ; Michel Labrecque ; Simon Joly ; Frederic E. PitreSource :
- Frontiers in plant science [ 1664-462X ] ; 2017.
Abstract
Arsenic (As) is a toxic element for plants and one of the most common anthropogenic pollutants found at contaminated sites. Despite its severe effects on plant metabolism, several species can accumulate substantial amounts of arsenic and endure the associated stress. However, the genetic mechanisms involved in arsenic tolerance remains obscure in many model plant species used for land decontamination (phytoremediation), including willows. The present study assesses the potential of Salix purpurea cv. 'Fish Creek' for arsenic phytoextraction and reveals the genetic responses behind arsenic tolerance, phytoextraction and metabolism. Four weeks of hydroponic exposure to 0, 5, 30 and 100 mg/L revealed that plants were able to tolerate up to 5 mg/L arsenic. Concentrations of 0 and 5 mg/L of arsenic treatment were then used to compare alterations in gene expression of roots, stems and leaves using RNA sequencing. Differential gene expression revealed transcripts encoding proteins putatively involved in entry of arsenic into the roots, storage in vacuoles and potential transport through the plant as well as primary and secondary (indirect) toxicity tolerance mechanisms. A major role for tannin as a compound used to relieve cellular toxicity is implicated as well as unexpected expression of the cadmium transporter CAX2, providing a potential means for internal arsenic mobility. These insights into the underpinning genetics of a successful phytoremediating species present novel opportunities for selection of dedicated arsenic tolerant crops as well as the potential to integrate such tolerances into a wider Salix ideotype alongside traits including biomass yield, biomass quality, low agricultural inputs and phytochemical production.
DOI: 10.3389/fpls.2017.01115
PubMed: 28702037
PubMed Central: PMC5487440
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Brereton</name><affiliation><nlm:affiliation>Institut de Recherche en Biologie Végétale, University of MontrealMontréal, QC, Canada.</nlm:affiliation></affiliation></author><author><name sortKey="Gonzalez, Emmanuel" sort="Gonzalez, Emmanuel" uniqKey="Gonzalez E" first="Emmanuel" last="Gonzalez">Emmanuel Gonzalez</name><affiliation><nlm:affiliation>Canadian Centre for Computational Genomics, C3G Montreal Node, McGill University and Genome Quebec Innovation CentreMontréal, QC, Canada.</nlm:affiliation></affiliation></author><author><name sortKey="Labrecque, Michel" sort="Labrecque, Michel" uniqKey="Labrecque M" first="Michel" last="Labrecque">Michel Labrecque</name><affiliation><nlm:affiliation>Institut de Recherche en Biologie Végétale, University of MontrealMontréal, QC, Canada.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Montreal Botanical GardenMontréal, QC, Canada.</nlm:affiliation></affiliation></author><author><name sortKey="Joly, Simon" sort="Joly, Simon" uniqKey="Joly S" first="Simon" last="Joly">Simon Joly</name><affiliation><nlm:affiliation>Institut de Recherche en Biologie Végétale, University of MontrealMontréal, QC, Canada.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Montreal Botanical GardenMontréal, QC, Canada.</nlm:affiliation></affiliation></author><author><name sortKey="Pitre, Frederic E" sort="Pitre, Frederic E" uniqKey="Pitre F" first="Frederic E" last="Pitre">Frederic E. 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Pitre</name><affiliation><nlm:affiliation>Institut de Recherche en Biologie Végétale, University of MontrealMontréal, QC, Canada.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Montreal Botanical GardenMontréal, QC, Canada.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Frontiers in plant science</title><idno type="ISSN">1664-462X</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Arsenic (As) is a toxic element for plants and one of the most common anthropogenic pollutants found at contaminated sites. Despite its severe effects on plant metabolism, several species can accumulate substantial amounts of arsenic and endure the associated stress. However, the genetic mechanisms involved in arsenic tolerance remains obscure in many model plant species used for land decontamination (phytoremediation), including willows. The present study assesses the potential of <i>Salix purpurea</i> cv. 'Fish Creek' for arsenic phytoextraction and reveals the genetic responses behind arsenic tolerance, phytoextraction and metabolism. Four weeks of hydroponic exposure to 0, 5, 30 and 100 mg/L revealed that plants were able to tolerate up to 5 mg/L arsenic. Concentrations of 0 and 5 mg/L of arsenic treatment were then used to compare alterations in gene expression of roots, stems and leaves using RNA sequencing. Differential gene expression revealed transcripts encoding proteins putatively involved in entry of arsenic into the roots, storage in vacuoles and potential transport through the plant as well as primary and secondary (indirect) toxicity tolerance mechanisms. A major role for tannin as a compound used to relieve cellular toxicity is implicated as well as unexpected expression of the cadmium transporter CAX2, providing a potential means for internal arsenic mobility. These insights into the underpinning genetics of a successful phytoremediating species present novel opportunities for selection of dedicated arsenic tolerant crops as well as the potential to integrate such tolerances into a wider <i>Salix</i> ideotype alongside traits including biomass yield, biomass quality, low agricultural inputs and phytochemical production.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">28702037</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>01</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1664-462X</ISSN><JournalIssue CitedMedium="Print"><Volume>8</Volume><PubDate><Year>2017</Year></PubDate></JournalIssue><Title>Frontiers in plant science</Title><ISOAbbreviation>Front Plant Sci</ISOAbbreviation></Journal><ArticleTitle>Transcriptomic Response of Purple Willow (<i>Salix purpurea</i>) to Arsenic Stress.</ArticleTitle><Pagination><MedlinePgn>1115</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3389/fpls.2017.01115</ELocationID><Abstract><AbstractText>Arsenic (As) is a toxic element for plants and one of the most common anthropogenic pollutants found at contaminated sites. Despite its severe effects on plant metabolism, several species can accumulate substantial amounts of arsenic and endure the associated stress. However, the genetic mechanisms involved in arsenic tolerance remains obscure in many model plant species used for land decontamination (phytoremediation), including willows. The present study assesses the potential of <i>Salix purpurea</i> cv. 'Fish Creek' for arsenic phytoextraction and reveals the genetic responses behind arsenic tolerance, phytoextraction and metabolism. Four weeks of hydroponic exposure to 0, 5, 30 and 100 mg/L revealed that plants were able to tolerate up to 5 mg/L arsenic. Concentrations of 0 and 5 mg/L of arsenic treatment were then used to compare alterations in gene expression of roots, stems and leaves using RNA sequencing. Differential gene expression revealed transcripts encoding proteins putatively involved in entry of arsenic into the roots, storage in vacuoles and potential transport through the plant as well as primary and secondary (indirect) toxicity tolerance mechanisms. A major role for tannin as a compound used to relieve cellular toxicity is implicated as well as unexpected expression of the cadmium transporter CAX2, providing a potential means for internal arsenic mobility. These insights into the underpinning genetics of a successful phytoremediating species present novel opportunities for selection of dedicated arsenic tolerant crops as well as the potential to integrate such tolerances into a wider <i>Salix</i> ideotype alongside traits including biomass yield, biomass quality, low agricultural inputs and phytochemical production.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Yanitch</LastName><ForeName>Aymeric</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Institut de Recherche en Biologie Végétale, University of MontrealMontréal, QC, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Brereton</LastName><ForeName>Nicholas J B</ForeName><Initials>NJB</Initials><AffiliationInfo><Affiliation>Institut de Recherche en Biologie Végétale, University of MontrealMontréal, QC, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gonzalez</LastName><ForeName>Emmanuel</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Canadian Centre for Computational Genomics, C3G Montreal Node, McGill University and Genome Quebec Innovation CentreMontréal, QC, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Labrecque</LastName><ForeName>Michel</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Institut de Recherche en Biologie Végétale, University of MontrealMontréal, QC, Canada.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Montreal Botanical GardenMontréal, QC, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Joly</LastName><ForeName>Simon</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Institut de Recherche en Biologie Végétale, University of MontrealMontréal, QC, Canada.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Montreal Botanical GardenMontréal, QC, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pitre</LastName><ForeName>Frederic E</ForeName><Initials>FE</Initials><AffiliationInfo><Affiliation>Institut de Recherche en Biologie Végétale, University of MontrealMontréal, QC, Canada.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Montreal Botanical GardenMontréal, QC, Canada.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>06</Month><Day>28</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Front Plant Sci</MedlineTA><NlmUniqueID>101568200</NlmUniqueID><ISSNLinking>1664-462X</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">RNA-seq</Keyword><Keyword MajorTopicYN="N">Salix</Keyword><Keyword MajorTopicYN="N">abiotic stress tolerance</Keyword><Keyword MajorTopicYN="N">arsenic</Keyword><Keyword MajorTopicYN="N">phytoremediation</Keyword><Keyword MajorTopicYN="N">trace elements</Keyword><Keyword MajorTopicYN="N">transcriptomics</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>03</Month><Day>17</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>06</Month><Day>09</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>7</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>7</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>7</Month><Day>14</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28702037</ArticleId><ArticleId 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