A second quadrivirus strain from the phytopathogenic filamentous fungus Rosellinia necatrix.
Identifieur interne : 000C91 ( Main/Exploration ); précédent : 000C90; suivant : 000C92A second quadrivirus strain from the phytopathogenic filamentous fungus Rosellinia necatrix.
Auteurs : Yu-Hsin Lin [Japon] ; Sakae Hisano ; Hajime Yaegashi ; Satoko Kanematsu ; Nobuhiro SuzukiSource :
- Archives of virology [ 1432-8798 ] ; 2013.
Descripteurs français
- KwdFr :
- MESH :
- génétique : ARN viral, Virus à ARN.
- isolement et purification : Virus à ARN.
- virologie : Champignons, Xylariales.
- Analyse de séquence d'ADN, Données de séquences moléculaires, Similitude de séquences d'acides nucléiques.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : RNA, Viral.
- classification : RNA Viruses.
- genetics : RNA Viruses.
- isolation & purification : RNA Viruses.
- virology : Fungi, Xylariales.
- Molecular Sequence Data, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid.
Abstract
We report the biological and molecular characterisation ofa second quadrivirus strain termed Rosellinia necatrix quadrivirus 1 strain W1118 (RnQV1-W1118) from the ascomycete white root rot fungus. Commonalities with the first quadrivirus (RnQV1-W1075) include its quadripartite genome structure, spherical particle morphology, sequence heterogeneity in the extreme terminal end, 72–82%sequence identity between the corresponding proteins, and its ability to cause a latent infection. Distinguishing features include different conserved terminal sequences and the degree of susceptibility of two major capsid proteins to proteolytic degradation, which is thought to occur during virion purification. Identification of this second quadrivirus strain strengthens our earlier proposal that ‘‘Rosellinia necatrix quadrivirus 1’’ should be considered the type species of a novel family, ‘‘Quadriviridae’’.
DOI: 10.1007/s00705-012-1580-8
PubMed: 23277362
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">A second quadrivirus strain from the phytopathogenic filamentous fungus Rosellinia necatrix.</title><author><name sortKey="Lin, Yu Hsin" sort="Lin, Yu Hsin" uniqKey="Lin Y" first="Yu-Hsin" last="Lin">Yu-Hsin Lin</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Plant Science and Resources, Okayama University, Chuou 2-20-1, Kurashiki, Okayama 710-0046, Japan.</nlm:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Institute of Plant Science and Resources, Okayama University, Chuou 2-20-1, Kurashiki, Okayama 710-0046</wicri:regionArea><wicri:noRegion>Okayama 710-0046</wicri:noRegion></affiliation></author><author><name sortKey="Hisano, Sakae" sort="Hisano, Sakae" uniqKey="Hisano S" first="Sakae" last="Hisano">Sakae Hisano</name></author><author><name sortKey="Yaegashi, Hajime" sort="Yaegashi, Hajime" uniqKey="Yaegashi H" first="Hajime" last="Yaegashi">Hajime Yaegashi</name></author><author><name sortKey="Kanematsu, Satoko" sort="Kanematsu, Satoko" uniqKey="Kanematsu S" first="Satoko" last="Kanematsu">Satoko Kanematsu</name></author><author><name sortKey="Suzuki, Nobuhiro" sort="Suzuki, Nobuhiro" uniqKey="Suzuki N" first="Nobuhiro" last="Suzuki">Nobuhiro Suzuki</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2013">2013</date><idno type="RBID">pubmed:23277362</idno><idno type="pmid">23277362</idno><idno type="doi">10.1007/s00705-012-1580-8</idno><idno type="wicri:Area/Main/Corpus">000C73</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000C73</idno><idno type="wicri:Area/Main/Curation">000C73</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000C73</idno><idno type="wicri:Area/Main/Exploration">000C73</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">A second quadrivirus strain from the phytopathogenic filamentous fungus Rosellinia necatrix.</title><author><name sortKey="Lin, Yu Hsin" sort="Lin, Yu Hsin" uniqKey="Lin Y" first="Yu-Hsin" last="Lin">Yu-Hsin Lin</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Plant Science and Resources, Okayama University, Chuou 2-20-1, Kurashiki, Okayama 710-0046, Japan.</nlm:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Institute of Plant Science and Resources, Okayama University, Chuou 2-20-1, Kurashiki, Okayama 710-0046</wicri:regionArea><wicri:noRegion>Okayama 710-0046</wicri:noRegion></affiliation></author><author><name sortKey="Hisano, Sakae" sort="Hisano, Sakae" uniqKey="Hisano S" first="Sakae" last="Hisano">Sakae Hisano</name></author><author><name sortKey="Yaegashi, Hajime" sort="Yaegashi, Hajime" uniqKey="Yaegashi H" first="Hajime" last="Yaegashi">Hajime Yaegashi</name></author><author><name sortKey="Kanematsu, Satoko" sort="Kanematsu, Satoko" uniqKey="Kanematsu S" first="Satoko" last="Kanematsu">Satoko Kanematsu</name></author><author><name sortKey="Suzuki, Nobuhiro" sort="Suzuki, Nobuhiro" uniqKey="Suzuki N" first="Nobuhiro" last="Suzuki">Nobuhiro Suzuki</name></author></analytic><series><title level="j">Archives of virology</title><idno type="eISSN">1432-8798</idno><imprint><date when="2013" type="published">2013</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Fungi (virology)</term><term>Molecular Sequence Data (MeSH)</term><term>RNA Viruses (classification)</term><term>RNA Viruses (genetics)</term><term>RNA Viruses (isolation & purification)</term><term>RNA, Viral (genetics)</term><term>Sequence Analysis, DNA (MeSH)</term><term>Sequence Homology, Nucleic Acid (MeSH)</term><term>Xylariales (virology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN viral (génétique)</term><term>Analyse de séquence d'ADN (MeSH)</term><term>Champignons (virologie)</term><term>Données de séquences moléculaires (MeSH)</term><term>Similitude de séquences d'acides nucléiques (MeSH)</term><term>Virus à ARN (classification)</term><term>Virus à ARN (génétique)</term><term>Virus à ARN (isolement et purification)</term><term>Xylariales (virologie)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Viral</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>RNA Viruses</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>RNA Viruses</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN viral</term><term>Virus à ARN</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>RNA Viruses</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Virus à ARN</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Champignons</term><term>Xylariales</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Fungi</term><term>Xylariales</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Molecular Sequence Data</term><term>Sequence Analysis, DNA</term><term>Sequence Homology, Nucleic Acid</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term><term>Données de séquences moléculaires</term><term>Similitude de séquences d'acides nucléiques</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">We report the biological and molecular characterisation ofa second quadrivirus strain termed Rosellinia necatrix quadrivirus 1 strain W1118 (RnQV1-W1118) from the ascomycete white root rot fungus. Commonalities with the first quadrivirus (RnQV1-W1075) include its quadripartite genome structure, spherical particle morphology, sequence heterogeneity in the extreme terminal end, 72–82%sequence identity between the corresponding proteins, and its ability to cause a latent infection. Distinguishing features include different conserved terminal sequences and the degree of susceptibility of two major capsid proteins to proteolytic degradation, which is thought to occur during virion purification. Identification of this second quadrivirus strain strengthens our earlier proposal that ‘‘Rosellinia necatrix quadrivirus 1’’ should be considered the type species of a novel family, ‘‘Quadriviridae’’.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">23277362</PMID><DateCompleted><Year>2013</Year><Month>06</Month><Day>19</Day></DateCompleted><DateRevised><Year>2013</Year><Month>04</Month><Day>25</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-8798</ISSN><JournalIssue CitedMedium="Internet"><Volume>158</Volume><Issue>5</Issue><PubDate><Year>2013</Year><Month>May</Month></PubDate></JournalIssue><Title>Archives of virology</Title><ISOAbbreviation>Arch Virol</ISOAbbreviation></Journal><ArticleTitle>A second quadrivirus strain from the phytopathogenic filamentous fungus Rosellinia necatrix.</ArticleTitle><Pagination><MedlinePgn>1093-8</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00705-012-1580-8</ELocationID><Abstract><AbstractText>We report the biological and molecular characterisation ofa second quadrivirus strain termed Rosellinia necatrix quadrivirus 1 strain W1118 (RnQV1-W1118) from the ascomycete white root rot fungus. Commonalities with the first quadrivirus (RnQV1-W1075) include its quadripartite genome structure, spherical particle morphology, sequence heterogeneity in the extreme terminal end, 72–82%sequence identity between the corresponding proteins, and its ability to cause a latent infection. Distinguishing features include different conserved terminal sequences and the degree of susceptibility of two major capsid proteins to proteolytic degradation, which is thought to occur during virion purification. Identification of this second quadrivirus strain strengthens our earlier proposal that ‘‘Rosellinia necatrix quadrivirus 1’’ should be considered the type species of a novel family, ‘‘Quadriviridae’’.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Lin</LastName><ForeName>Yu-Hsin</ForeName><Initials>YH</Initials><AffiliationInfo><Affiliation>Institute of Plant Science and Resources, Okayama University, Chuou 2-20-1, Kurashiki, Okayama 710-0046, Japan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hisano</LastName><ForeName>Sakae</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Yaegashi</LastName><ForeName>Hajime</ForeName><Initials>H</Initials></Author><Author ValidYN="Y"><LastName>Kanematsu</LastName><ForeName>Satoko</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Suzuki</LastName><ForeName>Nobuhiro</ForeName><Initials>N</Initials></Author></AuthorList><Language>eng</Language><DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName><AccessionNumberList><AccessionNumber>AB744677</AccessionNumber><AccessionNumber>AB744678</AccessionNumber><AccessionNumber>AB744679</AccessionNumber><AccessionNumber>AB744680</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2013</Year><Month>01</Month><Day>01</Day></ArticleDate></Article><MedlineJournalInfo><Country>Austria</Country><MedlineTA>Arch Virol</MedlineTA><NlmUniqueID>7506870</NlmUniqueID><ISSNLinking>0304-8608</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012367">RNA, Viral</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D005658" MajorTopicYN="N">Fungi</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="N">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012328" MajorTopicYN="N">RNA Viruses</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012367" MajorTopicYN="N">RNA, Viral</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012689" MajorTopicYN="N">Sequence Homology, Nucleic Acid</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013098" MajorTopicYN="N">Xylariales</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2012</Year><Month>10</Month><Day>08</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2012</Year><Month>11</Month><Day>15</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2013</Year><Month>1</Month><Day>2</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2013</Year><Month>1</Month><Day>2</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2013</Year><Month>6</Month><Day>20</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">23277362</ArticleId><ArticleId IdType="doi">10.1007/s00705-012-1580-8</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Japon</li></country></list><tree><noCountry><name sortKey="Hisano, Sakae" sort="Hisano, Sakae" uniqKey="Hisano S" first="Sakae" last="Hisano">Sakae Hisano</name><name sortKey="Kanematsu, Satoko" sort="Kanematsu, Satoko" uniqKey="Kanematsu S" first="Satoko" last="Kanematsu">Satoko Kanematsu</name><name sortKey="Suzuki, Nobuhiro" sort="Suzuki, Nobuhiro" uniqKey="Suzuki N" first="Nobuhiro" last="Suzuki">Nobuhiro Suzuki</name><name sortKey="Yaegashi, Hajime" sort="Yaegashi, Hajime" uniqKey="Yaegashi H" first="Hajime" last="Yaegashi">Hajime Yaegashi</name></noCountry><country name="Japon"><noRegion><name sortKey="Lin, Yu Hsin" sort="Lin, Yu Hsin" uniqKey="Lin Y" first="Yu-Hsin" last="Lin">Yu-Hsin Lin</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/WhiteRotV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000C91 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000C91 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= WhiteRotV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:23277362
|texte= A second quadrivirus strain from the phytopathogenic filamentous fungus Rosellinia necatrix.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:23277362" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a WhiteRotV1
| This area was generated with Dilib version V0.6.37. |  |