Methylation of microRNA genes regulates gene expression in bisexual flower development in andromonoecious poplar.
Identifieur interne : 001C50 ( Main/Exploration ); précédent : 001C49; suivant : 001C51Methylation of microRNA genes regulates gene expression in bisexual flower development in andromonoecious poplar.
Auteurs : Yuepeng Song [République populaire de Chine] ; Min Tian [République populaire de Chine] ; Dong Ci [République populaire de Chine] ; Deqiang Zhang [République populaire de Chine]Source :
- Journal of experimental botany [ 1460-2431 ] ; 2015.
Descripteurs français
- KwdFr :
- ARN des plantes (génétique), Expression des gènes (MeSH), Fleurs (croissance et développement), Fleurs (génétique), Méthylation de l'ADN (MeSH), Populus (croissance et développement), Populus (génétique), Régulation de l'expression des gènes au cours du développement (MeSH), Régulation de l'expression des gènes végétaux (MeSH), Transcriptome (MeSH), microARN (génétique), Épigenèse génétique (MeSH).
- MESH :
- croissance et développement : Fleurs, Populus.
- génétique : ARN des plantes, Fleurs, Populus, microARN.
- Expression des gènes, Méthylation de l'ADN, Régulation de l'expression des gènes au cours du développement, Régulation de l'expression des gènes végétaux, Transcriptome, Épigenèse génétique.
English descriptors
- KwdEn :
- DNA Methylation (MeSH), Epigenesis, Genetic (MeSH), Flowers (genetics), Flowers (growth & development), Gene Expression (MeSH), Gene Expression Regulation, Developmental (MeSH), Gene Expression Regulation, Plant (MeSH), MicroRNAs (genetics), Populus (genetics), Populus (growth & development), RNA, Plant (genetics), Transcriptome (MeSH).
- MESH :
- chemical , genetics : MicroRNAs, RNA, Plant.
- genetics : Flowers, Populus.
- growth & development : Flowers, Populus.
- DNA Methylation, Epigenesis, Genetic, Gene Expression, Gene Expression Regulation, Developmental, Gene Expression Regulation, Plant, Transcriptome.
Abstract
Previous studies showed sex-specific DNA methylation and expression of candidate genes in bisexual flowers of andromonoecious poplar, but the regulatory relationship between methylation and microRNAs (miRNAs) remains unclear. To investigate whether the methylation of miRNA genes regulates gene expression in bisexual flower development, the methylome, microRNA, and transcriptome were examined in female and male flowers of andromonoecious poplar. 27 636 methylated coding genes and 113 methylated miRNA genes were identified. In the coding genes, 64.5% of the methylated reads mapped to the gene body region; by contrast, 60.7% of methylated reads in miRNA genes mainly mapped in the 5' and 3' flanking regions. CHH methylation showed the highest methylation levels and CHG showed the lowest methylation levels. Correlation analysis showed a significant, negative, strand-specific correlation of methylation and miRNA gene expression (r=0.79, P <0.05). The methylated miRNA genes included eight long miRNAs (lmiRNAs) of 24 nucleotides and 11 miRNAs related to flower development. miRNA172b might play an important role in the regulation of bisexual flower development-related gene expression in andromonoecious poplar, via modification of methylation. Gynomonoecious, female, and male poplars were used to validate the methylation patterns of the miRNA172b gene, implying that hyper-methylation in andromonoecious and gynomonoecious poplar might function as an important regulator in bisexual flower development. Our data provide a useful resource for the study of flower development in poplar and improve our understanding of the effect of epigenetic regulation on genes other than protein-coding genes.
DOI: 10.1093/jxb/eru531
PubMed: 25617468
PubMed Central: PMC4669551
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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<term>Flowers (growth & development)</term>
<term>Gene Expression (MeSH)</term>
<term>Gene Expression Regulation, Developmental (MeSH)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>MicroRNAs (genetics)</term>
<term>Populus (genetics)</term>
<term>Populus (growth & development)</term>
<term>RNA, Plant (genetics)</term>
<term>Transcriptome (MeSH)</term>
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<term>Expression des gènes (MeSH)</term>
<term>Fleurs (croissance et développement)</term>
<term>Fleurs (génétique)</term>
<term>Méthylation de l'ADN (MeSH)</term>
<term>Populus (croissance et développement)</term>
<term>Populus (génétique)</term>
<term>Régulation de l'expression des gènes au cours du développement (MeSH)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Transcriptome (MeSH)</term>
<term>microARN (génétique)</term>
<term>Épigenèse génétique (MeSH)</term>
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<term>RNA, Plant</term>
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<front><div type="abstract" xml:lang="en">Previous studies showed sex-specific DNA methylation and expression of candidate genes in bisexual flowers of andromonoecious poplar, but the regulatory relationship between methylation and microRNAs (miRNAs) remains unclear. To investigate whether the methylation of miRNA genes regulates gene expression in bisexual flower development, the methylome, microRNA, and transcriptome were examined in female and male flowers of andromonoecious poplar. 27 636 methylated coding genes and 113 methylated miRNA genes were identified. In the coding genes, 64.5% of the methylated reads mapped to the gene body region; by contrast, 60.7% of methylated reads in miRNA genes mainly mapped in the 5' and 3' flanking regions. CHH methylation showed the highest methylation levels and CHG showed the lowest methylation levels. Correlation analysis showed a significant, negative, strand-specific correlation of methylation and miRNA gene expression (r=0.79, P <0.05). The methylated miRNA genes included eight long miRNAs (lmiRNAs) of 24 nucleotides and 11 miRNAs related to flower development. miRNA172b might play an important role in the regulation of bisexual flower development-related gene expression in andromonoecious poplar, via modification of methylation. Gynomonoecious, female, and male poplars were used to validate the methylation patterns of the miRNA172b gene, implying that hyper-methylation in andromonoecious and gynomonoecious poplar might function as an important regulator in bisexual flower development. Our data provide a useful resource for the study of flower development in poplar and improve our understanding of the effect of epigenetic regulation on genes other than protein-coding genes. </div>
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<Abstract><AbstractText>Previous studies showed sex-specific DNA methylation and expression of candidate genes in bisexual flowers of andromonoecious poplar, but the regulatory relationship between methylation and microRNAs (miRNAs) remains unclear. To investigate whether the methylation of miRNA genes regulates gene expression in bisexual flower development, the methylome, microRNA, and transcriptome were examined in female and male flowers of andromonoecious poplar. 27 636 methylated coding genes and 113 methylated miRNA genes were identified. In the coding genes, 64.5% of the methylated reads mapped to the gene body region; by contrast, 60.7% of methylated reads in miRNA genes mainly mapped in the 5' and 3' flanking regions. CHH methylation showed the highest methylation levels and CHG showed the lowest methylation levels. Correlation analysis showed a significant, negative, strand-specific correlation of methylation and miRNA gene expression (r=0.79, P <0.05). The methylated miRNA genes included eight long miRNAs (lmiRNAs) of 24 nucleotides and 11 miRNAs related to flower development. miRNA172b might play an important role in the regulation of bisexual flower development-related gene expression in andromonoecious poplar, via modification of methylation. Gynomonoecious, female, and male poplars were used to validate the methylation patterns of the miRNA172b gene, implying that hyper-methylation in andromonoecious and gynomonoecious poplar might function as an important regulator in bisexual flower development. Our data provide a useful resource for the study of flower development in poplar and improve our understanding of the effect of epigenetic regulation on genes other than protein-coding genes. </AbstractText>
<CopyrightInformation>© The Author 2015. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.</CopyrightInformation>
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<ReferenceList><Reference><Citation>Dev Cell. 2007 Jul;13(1):115-25</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17609114</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cancer Res. 2008 Oct 1;68(19):7846-54</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18829540</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 2009 Jan;19(1):92-105</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18955434</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell Cycle. 2009 Mar 15;8(6):843-52</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19221491</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Biol. 2007 Jul;5(7):e174</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17579518</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2009 Apr;21(4):1053-69</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19376930</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2009 Jun;21(6):1762-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19531599</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 2009 Aug 21;138(4):750-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19703400</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Biol. 2009 Nov;7(11):e1000251</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19956801</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2010;5(1):e8697</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20084174</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2010 Mar;61(6):941-58</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20409269</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2010 May 14;328(5980):916-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20395474</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Cell. 2010 May 14;38(3):465-75</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20381393</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Genet Genomics. 2010 Aug;284(2):105-19</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20577761</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Curr Top Dev Biol. 2010;91:349-78</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20705188</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2011 Jul 26;108(30):12521-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21746919</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2012;7(2):e31621</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22355382</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Genomics. 2012;13:27</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22251412</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell Rep. 2012 Aug;31(8):1393-405</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22476437</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Genomics. 2012;13:300</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22747568</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2013 Jan;197(2):416-30</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23253333</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Brief Funct Genomics. 2013 Jan;12(1):58-65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23196851</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2013;8(5):e62681</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23667507</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Dev Biol. 2013 Aug 15;380(2):133-44</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23707900</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Mol Biol. 2013 Dec;83(6):559-76</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23860796</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genetics. 2001 Apr;157(4):1723-33</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11290726</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2002 Sep 20;297(5589):2053-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12242443</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Biochem Sci. 2003 Feb;28(2):91-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12575997</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2003 Jun;15(6):1296-309</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12782724</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Rev Genet. 2003 Aug;4(8):626-37</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12897774</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2003 Sep 16;100(19):11133-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12960391</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 2003 Nov;13(11):2498-504</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14597658</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2004 Mar 26;303(5666):2022-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12893888</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Development. 2004 Jul;131(14):3357-65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15226253</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Development. 2004 Sep;131(17):4311-22</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15294871</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 1996 Sep 3;93(18):9821-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8790415</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 1997 Jun;9(6):841-57</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9212461</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2005 Mar;17(3):705-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15722475</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Dev Cell. 2005 Apr;8(4):517-27</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15809034</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2005 Jun 28;102(26):9412-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15958531</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Plant Biol. 2006;57:19-53</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16669754</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Development. 2006 Sep;133(18):3539-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16914499</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2006 Sep 15;313(5793):1596-604</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16973872</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 2006 Sep 22;126(6):1189-201</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16949657</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Genet. 2007 Jan;39(1):61-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17128275</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2007 Feb;49(4):683-93</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17217458</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genes Dev. 2011 Feb 1;25(3):226-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21289068</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Clin Cancer Res. 2011 Apr 1;17(7):1722-30</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21350001</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Rev Genet. 2010 Mar;11(3):191-203</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20125086</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2011 May;62(8):2585-97</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21227931</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Evol Biol. 2011;11:122</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21569383</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Genet. 2007 Jul;39(7):901-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17589508</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Plant Biol. 2007;58:435-58</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17280524</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2011 Jul;62(11):3713-25</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21617249</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2008 Mar 1;24(5):713-4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18227114</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 2008 May 2;133(3):523-36</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18423832</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Rev Genet. 2008 Jun;9(6):465-76</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18463664</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2008 Jan;36(Database issue):D154-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17991681</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
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