The rbcL gene of Populus deltoides has multiple transcripts and is redox-regulated in vitro.
Identifieur interne : 002C76 ( Main/Exploration ); précédent : 002C75; suivant : 002C77The rbcL gene of Populus deltoides has multiple transcripts and is redox-regulated in vitro.
Auteurs : Sandhya Mehrotra [Inde] ; Prabodh Kumar Trivedi ; Ajay Sethuraman ; Rajesh MehrotraSource :
- Journal of plant physiology [ 1618-1328 ] ; 2011.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : RNA, Messenger, Ribulose-Bisphosphate Carboxylase.
- chemical : DNA Primers.
- genetics : Populus.
- Base Sequence, Gene Expression Regulation, Plant, In Vitro Techniques, Oxidation-Reduction.
Abstract
We report the discovery of three types of transcripts for the gene encoding large subunit of Rubisco (rbcL) from chloroplast genome of Populus deltoides, an angiospermic tree. While the larger two transcripts are in confirmation with reported transcripts for other rbcL genes as far as the 5' ends are concerned, the third transcript is unique since it lacks the consensus ribosome-binding site. We also report the molecular weights of several proteins interacting with the 5' untranslated region of the same mRNA and that the RNA-protein interaction in vitro is influenced by redox reagents.
DOI: 10.1016/j.jplph.2010.08.001
PubMed: 20817342
Affiliations:
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végétaux (MeSH)</term><term>Séquence nucléotidique (MeSH)</term><term>Techniques in vitro (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Messenger</term><term>Ribulose-Bisphosphate Carboxylase</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>DNA Primers</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN messager</term><term>Populus</term><term>Ribulose bisphosphate carboxylase</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Base Sequence</term><term>Gene Expression Regulation, Plant</term><term>In Vitro Techniques</term><term>Oxidation-Reduction</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Amorces ADN</term><term>Oxydoréduction</term><term>Régulation de l'expression des gènes végétaux</term><term>Séquence nucléotidique</term><term>Techniques in vitro</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">We report the discovery of three types of transcripts for the gene encoding large subunit of Rubisco (rbcL) from chloroplast genome of Populus deltoides, an angiospermic tree. While the larger two transcripts are in confirmation with reported transcripts for other rbcL genes as far as the 5' ends are concerned, the third transcript is unique since it lacks the consensus ribosome-binding site. We also report the molecular weights of several proteins interacting with the 5' untranslated region of the same mRNA and that the RNA-protein interaction in vitro is influenced by redox reagents.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">20817342</PMID><DateCompleted><Year>2011</Year><Month>05</Month><Day>24</Day></DateCompleted><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1618-1328</ISSN><JournalIssue CitedMedium="Internet"><Volume>168</Volume><Issue>5</Issue><PubDate><Year>2011</Year><Month>Mar</Month><Day>15</Day></PubDate></JournalIssue><Title>Journal of plant physiology</Title><ISOAbbreviation>J Plant Physiol</ISOAbbreviation></Journal><ArticleTitle>The rbcL gene of Populus deltoides has multiple transcripts and is redox-regulated in vitro.</ArticleTitle><Pagination><MedlinePgn>466-73</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.jplph.2010.08.001</ELocationID><Abstract><AbstractText>We report the discovery of three types of transcripts for the gene encoding large subunit of Rubisco (rbcL) from chloroplast genome of Populus deltoides, an angiospermic tree. While the larger two transcripts are in confirmation with reported transcripts for other rbcL genes as far as the 5' ends are concerned, the third transcript is unique since it lacks the consensus ribosome-binding site. We also report the molecular weights of several proteins interacting with the 5' untranslated region of the same mRNA and that the RNA-protein interaction in vitro is influenced by redox reagents.</AbstractText><CopyrightInformation>Copyright © 2010 Elsevier GmbH. All rights reserved.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Mehrotra</LastName><ForeName>Sandhya</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Chamber No. 3222 Q, Faculty Division III, Biosciences Group, Birla Institute of Technology and Sciences, Pilani, Rajasthan 333031, India.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Trivedi</LastName><ForeName>Prabodh Kumar</ForeName><Initials>PK</Initials></Author><Author ValidYN="Y"><LastName>Sethuraman</LastName><ForeName>Ajay</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Mehrotra</LastName><ForeName>Rajesh</ForeName><Initials>R</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>J Plant Physiol</MedlineTA><NlmUniqueID>9882059</NlmUniqueID><ISSNLinking>0176-1617</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D017931">DNA Primers</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012333">RNA, Messenger</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 4.1.1.39</RegistryNumber><NameOfSubstance UI="C101625">RbcL protein, plastid</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 4.1.1.39</RegistryNumber><NameOfSubstance UI="D012273">Ribulose-Bisphosphate Carboxylase</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D001483" MajorTopicYN="N">Base Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017931" MajorTopicYN="N">DNA Primers</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="Y">Gene Expression Regulation, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D066298" MajorTopicYN="N">In Vitro Techniques</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010084" MajorTopicYN="N">Oxidation-Reduction</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012333" MajorTopicYN="N">RNA, Messenger</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012273" MajorTopicYN="N">Ribulose-Bisphosphate Carboxylase</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2010</Year><Month>06</Month><Day>03</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2010</Year><Month>08</Month><Day>01</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2010</Year><Month>08</Month><Day>01</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2010</Year><Month>9</Month><Day>7</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2010</Year><Month>9</Month><Day>8</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2011</Year><Month>5</Month><Day>25</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">20817342</ArticleId><ArticleId IdType="pii">S0176-1617(10)00368-8</ArticleId><ArticleId IdType="doi">10.1016/j.jplph.2010.08.001</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Inde</li></country></list><tree><noCountry><name sortKey="Mehrotra, Rajesh" sort="Mehrotra, Rajesh" uniqKey="Mehrotra R" first="Rajesh" last="Mehrotra">Rajesh Mehrotra</name><name sortKey="Sethuraman, Ajay" sort="Sethuraman, Ajay" uniqKey="Sethuraman A" first="Ajay" last="Sethuraman">Ajay Sethuraman</name><name sortKey="Trivedi, Prabodh Kumar" sort="Trivedi, Prabodh Kumar" uniqKey="Trivedi P" first="Prabodh Kumar" last="Trivedi">Prabodh Kumar Trivedi</name></noCountry><country name="Inde"><noRegion><name sortKey="Mehrotra, Sandhya" sort="Mehrotra, Sandhya" uniqKey="Mehrotra S" first="Sandhya" last="Mehrotra">Sandhya Mehrotra</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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