Bacterial communities in an optional lichen symbiosis are determined by substrate, not algal photobionts.
Identifieur interne : 000B11 ( Main/Exploration ); précédent : 000B10; suivant : 000B12Bacterial communities in an optional lichen symbiosis are determined by substrate, not algal photobionts.
Auteurs : Samantha Fernández-Brime [Suède] ; Lucia Muggia [Italie] ; Stefanie Maier [Allemagne] ; Martin Grube [Autriche] ; Mats Wedin [Suède]Source :
- FEMS microbiology ecology [ 1574-6941 ] ; 2019.
Descripteurs français
- KwdFr :
- ARN ribosomique 16S (génétique), Ascomycota (génétique), Ascomycota (physiologie), Bactéries (classification), Bactéries (génétique), Bois (microbiologie), Chlorophyta (génétique), Chlorophyta (microbiologie), Chlorophyta (physiologie), Corps fructifères de champignon (physiologie), Lichens (génétique), Lichens (microbiologie), Microbiote (génétique), Populus (microbiologie), Suède (MeSH), Symbiose (MeSH), Écorce (microbiologie).
- MESH :
- génétique : ARN ribosomique 16S, Ascomycota, Bactéries, Chlorophyta, Lichens, Microbiote.
- microbiologie : Bois, Chlorophyta, Lichens, Populus, Écorce.
- physiologie : Ascomycota, Chlorophyta, Corps fructifères de champignon.
- Suède, Symbiose.
- Wicri :
- geographic : Suède.
English descriptors
- KwdEn :
- Ascomycota (genetics), Ascomycota (physiology), Bacteria (classification), Bacteria (genetics), Chlorophyta (genetics), Chlorophyta (microbiology), Chlorophyta (physiology), Fruiting Bodies, Fungal (physiology), Lichens (genetics), Lichens (microbiology), Microbiota (genetics), Plant Bark (microbiology), Populus (microbiology), RNA, Ribosomal, 16S (genetics), Sweden (MeSH), Symbiosis (MeSH), Wood (microbiology).
- MESH :
- chemical , genetics : RNA, Ribosomal, 16S.
- geographic : Sweden.
- classification : Bacteria.
- genetics : Ascomycota, Bacteria, Chlorophyta, Lichens, Microbiota.
- microbiology : Chlorophyta, Lichens, Plant Bark, Populus, Wood.
- physiology : Ascomycota, Chlorophyta, Fruiting Bodies, Fungal.
- Symbiosis.
Abstract
Borderline lichens are simple mutualistic symbioses between fungi and algae, where the fungi form loose mycelia interweaving algal cells, instead of forming a lichen thallus. Schizoxylon albescens shows two nutritional modes: it can either live as a borderline lichen on Populus tremula bark or as a saprotroph on Populus wood. This enables us to investigate the microbiota diversity in simple fungal-algal associations and to study the impact of lichenization on the structure of bacterial communities. We sampled three areas in Sweden covering the distribution of Schizoxylon, and using high-throughput sequencing of the 16S rRNA gene and fluorescence in situ hybridization we characterized the associated microbiota. Bacterial communities in lichenized and saprotrophic Schizoxylon were clearly distinct, but when comparing the microbiota with the respective substrates, only the fruiting bodies show clear differences in composition and abundance from the communities in the substrates. The colonization by either lichenized or saprotrophic mycelia of Schizoxylon did not significantly influence the microbiota in the substrate. This suggests that in a morphologically simple form of lichenization, as represented by the Schizoxylon-Coccomyxa system, algal-fungal interactions do not significantly influence bacterial communities, but a more complex structure of the lichen thallus is likely required for hosting specific microbiota.
DOI: 10.1093/femsec/fiz012
PubMed: 30668688
Affiliations:
Links toward previous steps (curation, corpus...)
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Schizoxylon albescens shows two nutritional modes: it can either live as a borderline lichen on Populus tremula bark or as a saprotroph on Populus wood. This enables us to investigate the microbiota diversity in simple fungal-algal associations and to study the impact of lichenization on the structure of bacterial communities. We sampled three areas in Sweden covering the distribution of Schizoxylon, and using high-throughput sequencing of the 16S rRNA gene and fluorescence in situ hybridization we characterized the associated microbiota. Bacterial communities in lichenized and saprotrophic Schizoxylon were clearly distinct, but when comparing the microbiota with the respective substrates, only the fruiting bodies show clear differences in composition and abundance from the communities in the substrates. The colonization by either lichenized or saprotrophic mycelia of Schizoxylon did not significantly influence the microbiota in the substrate. This suggests that in a morphologically simple form of lichenization, as represented by the Schizoxylon-Coccomyxa system, algal-fungal interactions do not significantly influence bacterial communities, but a more complex structure of the lichen thallus is likely required for hosting specific microbiota.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">30668688</PMID><DateCompleted><Year>2020</Year><Month>05</Month><Day>08</Day></DateCompleted><DateRevised><Year>2020</Year><Month>05</Month><Day>08</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1574-6941</ISSN><JournalIssue CitedMedium="Internet"><Volume>95</Volume><Issue>3</Issue><PubDate><Year>2019</Year><Month>03</Month><Day>01</Day></PubDate></JournalIssue><Title>FEMS microbiology ecology</Title><ISOAbbreviation>FEMS Microbiol Ecol</ISOAbbreviation></Journal><ArticleTitle>Bacterial communities in an optional lichen symbiosis are determined by substrate, not algal photobionts.</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">fiz012</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1093/femsec/fiz012</ELocationID><Abstract><AbstractText>Borderline lichens are simple mutualistic symbioses between fungi and algae, where the fungi form loose mycelia interweaving algal cells, instead of forming a lichen thallus. Schizoxylon albescens shows two nutritional modes: it can either live as a borderline lichen on Populus tremula bark or as a saprotroph on Populus wood. This enables us to investigate the microbiota diversity in simple fungal-algal associations and to study the impact of lichenization on the structure of bacterial communities. We sampled three areas in Sweden covering the distribution of Schizoxylon, and using high-throughput sequencing of the 16S rRNA gene and fluorescence in situ hybridization we characterized the associated microbiota. Bacterial communities in lichenized and saprotrophic Schizoxylon were clearly distinct, but when comparing the microbiota with the respective substrates, only the fruiting bodies show clear differences in composition and abundance from the communities in the substrates. The colonization by either lichenized or saprotrophic mycelia of Schizoxylon did not significantly influence the microbiota in the substrate. This suggests that in a morphologically simple form of lichenization, as represented by the Schizoxylon-Coccomyxa system, algal-fungal interactions do not significantly influence bacterial communities, but a more complex structure of the lichen thallus is likely required for hosting specific microbiota.</AbstractText><CopyrightInformation>© FEMS 2019.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Fernández-Brime</LastName><ForeName>Samantha</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Botany, Swedish Museum of Natural History, PO Box 50007, SE-10405 Stockholm, Sweden.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Muggia</LastName><ForeName>Lucia</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Department of Life Sciences, University of Trieste, via Giorgieri 10, 34127 Trieste, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Maier</LastName><ForeName>Stefanie</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Multiphase Chemistry, Max Planck Institute for Chemistry, Hahn-Meitner-Weg 1, 55128 Mainz, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Grube</LastName><ForeName>Martin</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Institute of Plant Sciences, University of Graz, Holteigasse 6, 8010 Graz, Austria.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wedin</LastName><ForeName>Mats</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Botany, Swedish Museum of Natural History, PO Box 50007, SE-10405 Stockholm, Sweden.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>FEMS Microbiol Ecol</MedlineTA><NlmUniqueID>8901229</NlmUniqueID><ISSNLinking>0168-6496</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012336">RNA, Ribosomal, 16S</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D001203" MajorTopicYN="N">Ascomycota</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D001419" MajorTopicYN="N">Bacteria</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000460" MajorTopicYN="N">Chlorophyta</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D048690" MajorTopicYN="N">Fruiting Bodies, Fungal</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008011" MajorTopicYN="N">Lichens</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D064307" MajorTopicYN="Y">Microbiota</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D024301" MajorTopicYN="N">Plant Bark</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012336" MajorTopicYN="N">RNA, Ribosomal, 16S</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013548" MajorTopicYN="N" Type="Geographic">Sweden</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013559" MajorTopicYN="Y">Symbiosis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014934" MajorTopicYN="N">Wood</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">Coccomyxa
</Keyword><Keyword MajorTopicYN="Y">Schizoxylon
</Keyword><Keyword MajorTopicYN="Y">FISH</Keyword><Keyword MajorTopicYN="Y">fungal life style</Keyword><Keyword MajorTopicYN="Y">metabarcoding</Keyword><Keyword MajorTopicYN="Y">microbiota</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="accepted"><Year>2019</Year><Month>01</Month><Day>21</Day></PubMedPubDate><PubMedPubDate PubStatus="received"><Year>2018</Year><Month>07</Month><Day>19</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2019</Year><Month>1</Month><Day>23</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>5</Month><Day>10</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2019</Year><Month>1</Month><Day>23</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">30668688</ArticleId><ArticleId IdType="pii">5298863</ArticleId><ArticleId IdType="doi">10.1093/femsec/fiz012</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Allemagne</li><li>Autriche</li><li>Italie</li><li>Suède</li></country><region><li>Rhénanie-Palatinat</li></region><settlement><li>Mayence</li></settlement></list><tree><country name="Suède"><noRegion><name sortKey="Fernandez Brime, Samantha" sort="Fernandez Brime, Samantha" uniqKey="Fernandez Brime S" first="Samantha" last="Fernández-Brime">Samantha Fernández-Brime</name></noRegion><name sortKey="Wedin, Mats" sort="Wedin, Mats" uniqKey="Wedin M" first="Mats" last="Wedin">Mats Wedin</name></country><country name="Italie"><noRegion><name sortKey="Muggia, Lucia" sort="Muggia, Lucia" uniqKey="Muggia L" first="Lucia" last="Muggia">Lucia Muggia</name></noRegion></country><country name="Allemagne"><region name="Rhénanie-Palatinat"><name sortKey="Maier, Stefanie" sort="Maier, Stefanie" uniqKey="Maier S" first="Stefanie" last="Maier">Stefanie Maier</name></region></country><country name="Autriche"><noRegion><name sortKey="Grube, Martin" sort="Grube, Martin" uniqKey="Grube M" first="Martin" last="Grube">Martin Grube</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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