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Selective One-Dimensional 13C-13C Spin-Diffusion Solid-State Nuclear Magnetic Resonance Methods to Probe Spatial Arrangements in Biopolymers Including Plant Cell Walls, Peptides, and Spider Silk.

Identifieur interne : 000128 ( Main/Exploration ); précédent : 000127; suivant : 000129

Selective One-Dimensional 13C-13C Spin-Diffusion Solid-State Nuclear Magnetic Resonance Methods to Probe Spatial Arrangements in Biopolymers Including Plant Cell Walls, Peptides, and Spider Silk.

Auteurs : Bennett Addison [États-Unis] ; Dillan Stengel [États-Unis] ; Vivek S. Bharadwaj [États-Unis] ; Renee M. Happs [États-Unis] ; Crissa Doeppke [États-Unis] ; Tuo Wang [États-Unis] ; Yannick J. Bomble [États-Unis] ; Gregory P. Holland [États-Unis] ; Anne E. Harman-Ware [États-Unis]

Source :

RBID : pubmed:33091304

Abstract

Two-dimensional (2D) and 3D through-space 13C-13C homonuclear spin-diffusion techniques are powerful solid-state nuclear magnetic resonance (NMR) tools for extracting structural information from 13C-enriched biomolecules, but necessarily long acquisition times restrict their applications. In this work, we explore the broad utility and underutilized power of a chemical shift-selective one-dimensional (1D) version of a 2D 13C-13C spin-diffusion solid-state NMR technique. The method, which is called 1D dipolar-assisted rotational resonance (DARR) difference, is applied to a variety of biomaterials including lignocellulosic plant cell walls, microcrystalline peptide fMLF, and black widow dragline spider silk. 1D 13C-13C spin-diffusion methods described here apply in select cases in which the 1D 13C solid-state NMR spectrum displays chemical shift-resolved moieties. This is analogous to the selective 1D nuclear Overhauser effect spectroscopy (NOESY) experiment utilized in liquid-state NMR as a faster (1D instead of 2D) and often less ambiguous (direct sampling of the time domain data, coupled with increased signal averaging) alternative to 2D NOESY. Selective 1D 13C-13C spin-diffusion methods are more time-efficient than their 2D counterparts such as proton-driven spin diffusion (PDSD) and dipolar-assisted rotational resonance. The additional time gained enables measurements of 13C-13C spin-diffusion buildup curves and extraction of spin-diffusion time constants TSD, yielding detailed structural information. Specifically, selective 1D DARR difference buildup curves applied to 13C-enriched hybrid poplar woody stems confirm strong spatial interaction between lignin and acetylated xylan polymers within poplar plant secondary cell walls, and an interpolymer distance of ∼0.45-0.5 nm was estimated. Additionally, Tyr/Gly long-range correlations were observed on isotopically enriched black widow spider dragline silks.

DOI: 10.1021/acs.jpcb.0c07759
PubMed: 33091304


Affiliations:


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<div type="abstract" xml:lang="en">Two-dimensional (2D) and 3D through-space
<sup>13</sup>
C-
<sup>13</sup>
C homonuclear spin-diffusion techniques are powerful solid-state nuclear magnetic resonance (NMR) tools for extracting structural information from
<sup>13</sup>
C-enriched biomolecules, but necessarily long acquisition times restrict their applications. In this work, we explore the broad utility and underutilized power of a chemical shift-selective one-dimensional (1D) version of a 2D
<sup>13</sup>
C-
<sup>13</sup>
C spin-diffusion solid-state NMR technique. The method, which is called 1D dipolar-assisted rotational resonance (DARR) difference, is applied to a variety of biomaterials including lignocellulosic plant cell walls, microcrystalline peptide fMLF, and black widow dragline spider silk. 1D
<sup>13</sup>
C-
<sup>13</sup>
C spin-diffusion methods described here apply in select cases in which the 1D
<sup>13</sup>
C solid-state NMR spectrum displays chemical shift-resolved moieties. This is analogous to the selective 1D nuclear Overhauser effect spectroscopy (NOESY) experiment utilized in liquid-state NMR as a faster (1D instead of 2D) and often less ambiguous (direct sampling of the time domain data, coupled with increased signal averaging) alternative to 2D NOESY. Selective 1D
<sup>13</sup>
C-
<sup>13</sup>
C spin-diffusion methods are more time-efficient than their 2D counterparts such as proton-driven spin diffusion (PDSD) and dipolar-assisted rotational resonance. The additional time gained enables measurements of
<sup>13</sup>
C-
<sup>13</sup>
C spin-diffusion buildup curves and extraction of spin-diffusion time constants
<i>T</i>
<sub>SD</sub>
, yielding detailed structural information. Specifically, selective 1D DARR difference buildup curves applied to
<sup>13</sup>
C-enriched hybrid poplar woody stems confirm strong spatial interaction between lignin and acetylated xylan polymers within poplar plant secondary cell walls, and an interpolymer distance of ∼0.45-0.5 nm was estimated. Additionally, Tyr/Gly long-range correlations were observed on isotopically enriched black widow spider dragline silks.</div>
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<sup>13</sup>
C-
<sup>13</sup>
C homonuclear spin-diffusion techniques are powerful solid-state nuclear magnetic resonance (NMR) tools for extracting structural information from
<sup>13</sup>
C-enriched biomolecules, but necessarily long acquisition times restrict their applications. In this work, we explore the broad utility and underutilized power of a chemical shift-selective one-dimensional (1D) version of a 2D
<sup>13</sup>
C-
<sup>13</sup>
C spin-diffusion solid-state NMR technique. The method, which is called 1D dipolar-assisted rotational resonance (DARR) difference, is applied to a variety of biomaterials including lignocellulosic plant cell walls, microcrystalline peptide fMLF, and black widow dragline spider silk. 1D
<sup>13</sup>
C-
<sup>13</sup>
C spin-diffusion methods described here apply in select cases in which the 1D
<sup>13</sup>
C solid-state NMR spectrum displays chemical shift-resolved moieties. This is analogous to the selective 1D nuclear Overhauser effect spectroscopy (NOESY) experiment utilized in liquid-state NMR as a faster (1D instead of 2D) and often less ambiguous (direct sampling of the time domain data, coupled with increased signal averaging) alternative to 2D NOESY. Selective 1D
<sup>13</sup>
C-
<sup>13</sup>
C spin-diffusion methods are more time-efficient than their 2D counterparts such as proton-driven spin diffusion (PDSD) and dipolar-assisted rotational resonance. The additional time gained enables measurements of
<sup>13</sup>
C-
<sup>13</sup>
C spin-diffusion buildup curves and extraction of spin-diffusion time constants
<i>T</i>
<sub>SD</sub>
, yielding detailed structural information. Specifically, selective 1D DARR difference buildup curves applied to
<sup>13</sup>
C-enriched hybrid poplar woody stems confirm strong spatial interaction between lignin and acetylated xylan polymers within poplar plant secondary cell walls, and an interpolymer distance of ∼0.45-0.5 nm was estimated. Additionally, Tyr/Gly long-range correlations were observed on isotopically enriched black widow spider dragline silks.</AbstractText>
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<name sortKey="Addison, Bennett" sort="Addison, Bennett" uniqKey="Addison B" first="Bennett" last="Addison">Bennett Addison</name>
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<name sortKey="Bharadwaj, Vivek S" sort="Bharadwaj, Vivek S" uniqKey="Bharadwaj V" first="Vivek S" last="Bharadwaj">Vivek S. Bharadwaj</name>
<name sortKey="Bomble, Yannick J" sort="Bomble, Yannick J" uniqKey="Bomble Y" first="Yannick J" last="Bomble">Yannick J. Bomble</name>
<name sortKey="Doeppke, Crissa" sort="Doeppke, Crissa" uniqKey="Doeppke C" first="Crissa" last="Doeppke">Crissa Doeppke</name>
<name sortKey="Happs, Renee M" sort="Happs, Renee M" uniqKey="Happs R" first="Renee M" last="Happs">Renee M. Happs</name>
<name sortKey="Harman Ware, Anne E" sort="Harman Ware, Anne E" uniqKey="Harman Ware A" first="Anne E" last="Harman-Ware">Anne E. Harman-Ware</name>
<name sortKey="Holland, Gregory P" sort="Holland, Gregory P" uniqKey="Holland G" first="Gregory P" last="Holland">Gregory P. Holland</name>
<name sortKey="Stengel, Dillan" sort="Stengel, Dillan" uniqKey="Stengel D" first="Dillan" last="Stengel">Dillan Stengel</name>
<name sortKey="Wang, Tuo" sort="Wang, Tuo" uniqKey="Wang T" first="Tuo" last="Wang">Tuo Wang</name>
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