Draft Genome Sequence of Acinetobacter calcoaceticus Strain GK1, a Hydrocarbon-Degrading Plant Growth-Promoting Rhizospheric Bacterium.
Identifieur interne : 001B67 ( Main/Curation ); précédent : 001B66; suivant : 001B68Draft Genome Sequence of Acinetobacter calcoaceticus Strain GK1, a Hydrocarbon-Degrading Plant Growth-Promoting Rhizospheric Bacterium.
Auteurs : Panagiotis Gkorezis [Belgique] ; Eric M. Bottos [Canada] ; Jonathan D. Van Hamme [Canada] ; Andrea Franzetti [Italie] ; Gennaro Roberto Abbamondi [Italie] ; Maria Balseiro-Romero [Espagne] ; Nele Weyens [Belgique] ; Francois Rineau [Belgique] ; Jaco Vangronsveld [Belgique]Source :
- Genome announcements [ 2169-8287 ] ; 2015.
Abstract
The 3.94-Mb draft genome of Acinetobacter calcoaceticus GK1, a hydrocarbonoclastic plant growth-promoting Gram-negative rhizospheric bacterium, is presented here. Isolated at the Ford Motor Company site in Genk, Belgium, from poplar trees planted on a diesel-contaminated plume, GK1 is useful for enhancing hydrocarbon phytoremediation.
DOI: 10.1128/genomeA.00909-15
PubMed: 26272576
PubMed Central: PMC4536687
Links toward previous steps (curation, corpus...)
- to stream Main, to step Corpus: Pour aller vers cette notice dans l'étape Curation :001B67
Links to Exploration step
pubmed:26272576Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Draft Genome Sequence of Acinetobacter calcoaceticus Strain GK1, a Hydrocarbon-Degrading Plant Growth-Promoting Rhizospheric Bacterium.</title>
<author><name sortKey="Gkorezis, Panagiotis" sort="Gkorezis, Panagiotis" uniqKey="Gkorezis P" first="Panagiotis" last="Gkorezis">Panagiotis Gkorezis</name>
<affiliation wicri:level="1"><nlm:affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Hasselt University, Centre for Environmental Sciences, Diepenbeek</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Bottos, Eric M" sort="Bottos, Eric M" uniqKey="Bottos E" first="Eric M" last="Bottos">Eric M. Bottos</name>
<affiliation wicri:level="1"><nlm:affiliation>Thompson Rivers University, Department of Biological Sciences, Kamloops, British Columbia, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Thompson Rivers University, Department of Biological Sciences, Kamloops, British Columbia</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Van Hamme, Jonathan D" sort="Van Hamme, Jonathan D" uniqKey="Van Hamme J" first="Jonathan D" last="Van Hamme">Jonathan D. Van Hamme</name>
<affiliation wicri:level="1"><nlm:affiliation>Thompson Rivers University, Department of Biological Sciences, Kamloops, British Columbia, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Thompson Rivers University, Department of Biological Sciences, Kamloops, British Columbia</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Franzetti, Andrea" sort="Franzetti, Andrea" uniqKey="Franzetti A" first="Andrea" last="Franzetti">Andrea Franzetti</name>
<affiliation wicri:level="1"><nlm:affiliation>University of Milano-Bicocca, Department of Environmental Sciences, Milano, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>University of Milano-Bicocca, Department of Environmental Sciences, Milano</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Abbamondi, Gennaro Roberto" sort="Abbamondi, Gennaro Roberto" uniqKey="Abbamondi G" first="Gennaro Roberto" last="Abbamondi">Gennaro Roberto Abbamondi</name>
<affiliation wicri:level="1"><nlm:affiliation>CNR, National Research Council of Italy, Institute of Biomolecular Chemistry, Pozzuoli, Naples, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>CNR, National Research Council of Italy, Institute of Biomolecular Chemistry, Pozzuoli, Naples</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Balseiro Romero, Maria" sort="Balseiro Romero, Maria" uniqKey="Balseiro Romero M" first="Maria" last="Balseiro-Romero">Maria Balseiro-Romero</name>
<affiliation wicri:level="1"><nlm:affiliation>University of Santiago de Compostela, Department of Soil Science and Agricultural Chemistry, Santiago de Compostela, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>University of Santiago de Compostela, Department of Soil Science and Agricultural Chemistry, Santiago de Compostela</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Weyens, Nele" sort="Weyens, Nele" uniqKey="Weyens N" first="Nele" last="Weyens">Nele Weyens</name>
<affiliation wicri:level="1"><nlm:affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Hasselt University, Centre for Environmental Sciences, Diepenbeek</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Rineau, Francois" sort="Rineau, Francois" uniqKey="Rineau F" first="Francois" last="Rineau">Francois Rineau</name>
<affiliation wicri:level="1"><nlm:affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Hasselt University, Centre for Environmental Sciences, Diepenbeek</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Vangronsveld, Jaco" sort="Vangronsveld, Jaco" uniqKey="Vangronsveld J" first="Jaco" last="Vangronsveld">Jaco Vangronsveld</name>
<affiliation wicri:level="1"><nlm:affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium jaco.vangronsveld@uhasselt.be.</nlm:affiliation>
<country wicri:rule="url">Belgique</country>
<wicri:regionArea>Hasselt University, Centre for Environmental Sciences, Diepenbeek</wicri:regionArea>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2015">2015</date>
<idno type="RBID">pubmed:26272576</idno>
<idno type="pmid">26272576</idno>
<idno type="doi">10.1128/genomeA.00909-15</idno>
<idno type="pmc">PMC4536687</idno>
<idno type="wicri:Area/Main/Corpus">001B67</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001B67</idno>
<idno type="wicri:Area/Main/Curation">001B67</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">001B67</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Draft Genome Sequence of Acinetobacter calcoaceticus Strain GK1, a Hydrocarbon-Degrading Plant Growth-Promoting Rhizospheric Bacterium.</title>
<author><name sortKey="Gkorezis, Panagiotis" sort="Gkorezis, Panagiotis" uniqKey="Gkorezis P" first="Panagiotis" last="Gkorezis">Panagiotis Gkorezis</name>
<affiliation wicri:level="1"><nlm:affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Hasselt University, Centre for Environmental Sciences, Diepenbeek</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Bottos, Eric M" sort="Bottos, Eric M" uniqKey="Bottos E" first="Eric M" last="Bottos">Eric M. Bottos</name>
<affiliation wicri:level="1"><nlm:affiliation>Thompson Rivers University, Department of Biological Sciences, Kamloops, British Columbia, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Thompson Rivers University, Department of Biological Sciences, Kamloops, British Columbia</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Van Hamme, Jonathan D" sort="Van Hamme, Jonathan D" uniqKey="Van Hamme J" first="Jonathan D" last="Van Hamme">Jonathan D. Van Hamme</name>
<affiliation wicri:level="1"><nlm:affiliation>Thompson Rivers University, Department of Biological Sciences, Kamloops, British Columbia, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Thompson Rivers University, Department of Biological Sciences, Kamloops, British Columbia</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Franzetti, Andrea" sort="Franzetti, Andrea" uniqKey="Franzetti A" first="Andrea" last="Franzetti">Andrea Franzetti</name>
<affiliation wicri:level="1"><nlm:affiliation>University of Milano-Bicocca, Department of Environmental Sciences, Milano, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>University of Milano-Bicocca, Department of Environmental Sciences, Milano</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Abbamondi, Gennaro Roberto" sort="Abbamondi, Gennaro Roberto" uniqKey="Abbamondi G" first="Gennaro Roberto" last="Abbamondi">Gennaro Roberto Abbamondi</name>
<affiliation wicri:level="1"><nlm:affiliation>CNR, National Research Council of Italy, Institute of Biomolecular Chemistry, Pozzuoli, Naples, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>CNR, National Research Council of Italy, Institute of Biomolecular Chemistry, Pozzuoli, Naples</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Balseiro Romero, Maria" sort="Balseiro Romero, Maria" uniqKey="Balseiro Romero M" first="Maria" last="Balseiro-Romero">Maria Balseiro-Romero</name>
<affiliation wicri:level="1"><nlm:affiliation>University of Santiago de Compostela, Department of Soil Science and Agricultural Chemistry, Santiago de Compostela, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>University of Santiago de Compostela, Department of Soil Science and Agricultural Chemistry, Santiago de Compostela</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Weyens, Nele" sort="Weyens, Nele" uniqKey="Weyens N" first="Nele" last="Weyens">Nele Weyens</name>
<affiliation wicri:level="1"><nlm:affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Hasselt University, Centre for Environmental Sciences, Diepenbeek</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Rineau, Francois" sort="Rineau, Francois" uniqKey="Rineau F" first="Francois" last="Rineau">Francois Rineau</name>
<affiliation wicri:level="1"><nlm:affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Hasselt University, Centre for Environmental Sciences, Diepenbeek</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Vangronsveld, Jaco" sort="Vangronsveld, Jaco" uniqKey="Vangronsveld J" first="Jaco" last="Vangronsveld">Jaco Vangronsveld</name>
<affiliation wicri:level="1"><nlm:affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium jaco.vangronsveld@uhasselt.be.</nlm:affiliation>
<country wicri:rule="url">Belgique</country>
<wicri:regionArea>Hasselt University, Centre for Environmental Sciences, Diepenbeek</wicri:regionArea>
</affiliation>
</author>
</analytic>
<series><title level="j">Genome announcements</title>
<idno type="ISSN">2169-8287</idno>
<imprint><date when="2015" type="published">2015</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">The 3.94-Mb draft genome of Acinetobacter calcoaceticus GK1, a hydrocarbonoclastic plant growth-promoting Gram-negative rhizospheric bacterium, is presented here. Isolated at the Ford Motor Company site in Genk, Belgium, from poplar trees planted on a diesel-contaminated plume, GK1 is useful for enhancing hydrocarbon phytoremediation. </div>
</front>
</TEI>
<pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">26272576</PMID>
<DateCompleted><Year>2015</Year>
<Month>08</Month>
<Day>14</Day>
</DateCompleted>
<DateRevised><Year>2020</Year>
<Month>09</Month>
<Day>29</Day>
</DateRevised>
<Article PubModel="Electronic"><Journal><ISSN IssnType="Print">2169-8287</ISSN>
<JournalIssue CitedMedium="Print"><Volume>3</Volume>
<Issue>4</Issue>
<PubDate><Year>2015</Year>
<Month>Aug</Month>
<Day>13</Day>
</PubDate>
</JournalIssue>
<Title>Genome announcements</Title>
<ISOAbbreviation>Genome Announc</ISOAbbreviation>
</Journal>
<ArticleTitle>Draft Genome Sequence of Acinetobacter calcoaceticus Strain GK1, a Hydrocarbon-Degrading Plant Growth-Promoting Rhizospheric Bacterium.</ArticleTitle>
<ELocationID EIdType="doi" ValidYN="Y">10.1128/genomeA.00909-15</ELocationID>
<ELocationID EIdType="pii" ValidYN="Y">e00909-15</ELocationID>
<Abstract><AbstractText>The 3.94-Mb draft genome of Acinetobacter calcoaceticus GK1, a hydrocarbonoclastic plant growth-promoting Gram-negative rhizospheric bacterium, is presented here. Isolated at the Ford Motor Company site in Genk, Belgium, from poplar trees planted on a diesel-contaminated plume, GK1 is useful for enhancing hydrocarbon phytoremediation. </AbstractText>
<CopyrightInformation>Copyright © 2015 Gkorezis et al.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Gkorezis</LastName>
<ForeName>Panagiotis</ForeName>
<Initials>P</Initials>
<AffiliationInfo><Affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Bottos</LastName>
<ForeName>Eric M</ForeName>
<Initials>EM</Initials>
<AffiliationInfo><Affiliation>Thompson Rivers University, Department of Biological Sciences, Kamloops, British Columbia, Canada.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Van Hamme</LastName>
<ForeName>Jonathan D</ForeName>
<Initials>JD</Initials>
<AffiliationInfo><Affiliation>Thompson Rivers University, Department of Biological Sciences, Kamloops, British Columbia, Canada.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Franzetti</LastName>
<ForeName>Andrea</ForeName>
<Initials>A</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0003-1279-9940</Identifier>
<AffiliationInfo><Affiliation>University of Milano-Bicocca, Department of Environmental Sciences, Milano, Italy.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Abbamondi</LastName>
<ForeName>Gennaro Roberto</ForeName>
<Initials>GR</Initials>
<AffiliationInfo><Affiliation>CNR, National Research Council of Italy, Institute of Biomolecular Chemistry, Pozzuoli, Naples, Italy.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Balseiro-Romero</LastName>
<ForeName>Maria</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>University of Santiago de Compostela, Department of Soil Science and Agricultural Chemistry, Santiago de Compostela, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Weyens</LastName>
<ForeName>Nele</ForeName>
<Initials>N</Initials>
<AffiliationInfo><Affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Rineau</LastName>
<ForeName>Francois</ForeName>
<Initials>F</Initials>
<AffiliationInfo><Affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Vangronsveld</LastName>
<ForeName>Jaco</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>Hasselt University, Centre for Environmental Sciences, Diepenbeek, Belgium jaco.vangronsveld@uhasselt.be.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2015</Year>
<Month>08</Month>
<Day>13</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>United States</Country>
<MedlineTA>Genome Announc</MedlineTA>
<NlmUniqueID>101595808</NlmUniqueID>
</MedlineJournalInfo>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2015</Year>
<Month>8</Month>
<Day>15</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed"><Year>2015</Year>
<Month>8</Month>
<Day>15</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2015</Year>
<Month>8</Month>
<Day>15</Day>
<Hour>6</Hour>
<Minute>1</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>epublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">26272576</ArticleId>
<ArticleId IdType="pii">3/4/e00909-15</ArticleId>
<ArticleId IdType="doi">10.1128/genomeA.00909-15</ArticleId>
<ArticleId IdType="pmc">PMC4536687</ArticleId>
</ArticleIdList>
<ReferenceList><Reference><Citation>J Environ Health Sci Eng. 2014 Dec 12;12(1):142</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25530870</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Res Microbiol. 2012 Apr;163(3):161-72</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22210401</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mar Pollut Bull. 2013 Nov 15;76(1-2):214-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24050127</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mar Pollut Bull. 2013 Nov 15;76(1-2):325-32</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24070455</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2009 Aug 15;25(16):2071-3</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19515959</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2014 Jan;42(Database issue):D459-71</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24225315</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2002;18 Suppl 1:S225-32</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12169551</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2013 Apr 15;29(8):1072-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23422339</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Res Microbiol. 2012 Jan;163(1):36-43</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22027104</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>OMICS. 2008 Jun;12(2):137-41</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18416670</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2011 Oct;77(20):7418-24</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21856821</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Comput Biol. 2012 May;19(5):455-77</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22506599</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Announc. 2015 Feb 05;3(1):null</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25657268</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001B67 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Curation/biblio.hfd -nk 001B67 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Bois |area= PoplarV1 |flux= Main |étape= Curation |type= RBID |clé= pubmed:26272576 |texte= Draft Genome Sequence of Acinetobacter calcoaceticus Strain GK1, a Hydrocarbon-Degrading Plant Growth-Promoting Rhizospheric Bacterium. }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Curation/RBID.i -Sk "pubmed:26272576" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Curation/biblio.hfd \ | NlmPubMed2Wicri -a PoplarV1
![]() | This area was generated with Dilib version V0.6.37. | ![]() |