Serveur d'exploration sur le peuplier

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Lignin-modifying enzymes of flavodon flavus, a basidiomycete isolated from a coastal marine environment

Identifieur interne : 004920 ( Main/Corpus ); précédent : 004919; suivant : 004921

Lignin-modifying enzymes of flavodon flavus, a basidiomycete isolated from a coastal marine environment

Auteurs : Raghukumar ; D'Souza ; Thorn ; Reddy

Source :

RBID : pubmed:10224007

Abstract

A basidiomycetous fungus Flavodon flavus (Klotzsch) Ryvarden (strain 312), isolated from decaying sea grass from a coral lagoon off the west coast of India, mineralized nearly 24% of 14C-labeled synthetic lignin to 14CO2 in 24 days. When grown in low-nitrogen medium (2.4 mM N) this fungus produced three major classes of extracellular lignin-modifying enzymes (LMEs): manganese-dependent peroxidase (MNP), lignin peroxidase (LIP), and laccase. Low MNP and laccase activities were seen in high-nitrogen medium (24 mM N), but no LIP activity was seen. In media containing lignocellulosic substrates such as pine, poplar, or sugarcane bagasse as the sole source of carbon and nitrogen, relatively high MNP and moderate levels of laccases were seen, but LIP production either was not seen or was minimal. LME production was also seen in media prepared with artificial seawater. Fast protein liquid chromatography and isoelectric focusing resolved LMEs into four isozymes each of MNP and LIP, while laccase isozymes were resolved into two groups, one group containing seven isozymes (pIs 4 to 6) and the other group containing at least three isozymes (pIs < 3). The molecular masses of the different isozymes were 43 to 99 kDa for MNP, 40 and 41.5 kDa for LIP, and 43 and 99 kDa for laccase. F. flavus showed effective degradation of various dye pollutants in media prepared with or without artificial seawater. This is the first report on the production of all three major classes of LMEs by F. flavus and points to the bioremediation potential of this organism in terrestrial as well as marine environments.

DOI: 10.1128/AEM.65.5.2103-2111.1999
PubMed: 10224007
PubMed Central: PMC91304

Links to Exploration step

pubmed:10224007

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Lignin-modifying enzymes of flavodon flavus, a basidiomycete isolated from a coastal marine environment </title>
<author>
<name sortKey="Raghukumar" sort="Raghukumar" uniqKey="Raghukumar" last="Raghukumar">Raghukumar</name>
<affiliation>
<nlm:affiliation>Department of Microbiology and NSF Center for Microbial Ecology, Michigan State University, East Lansing, Michigan 48824-1101, USA.</nlm:affiliation>
</affiliation>
</author>
<author>
<name sortKey="D Souza" sort="D Souza" uniqKey="D Souza" last="D'Souza">D'Souza</name>
</author>
<author>
<name sortKey="Thorn" sort="Thorn" uniqKey="Thorn" last="Thorn">Thorn</name>
</author>
<author>
<name sortKey="Reddy" sort="Reddy" uniqKey="Reddy" last="Reddy">Reddy</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="1999">1999</date>
<idno type="RBID">pubmed:10224007</idno>
<idno type="pmid">10224007</idno>
<idno type="pmc">PMC91304</idno>
<idno type="doi">10.1128/AEM.65.5.2103-2111.1999</idno>
<idno type="wicri:Area/Main/Corpus">004920</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">004920</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Lignin-modifying enzymes of flavodon flavus, a basidiomycete isolated from a coastal marine environment </title>
<author>
<name sortKey="Raghukumar" sort="Raghukumar" uniqKey="Raghukumar" last="Raghukumar">Raghukumar</name>
<affiliation>
<nlm:affiliation>Department of Microbiology and NSF Center for Microbial Ecology, Michigan State University, East Lansing, Michigan 48824-1101, USA.</nlm:affiliation>
</affiliation>
</author>
<author>
<name sortKey="D Souza" sort="D Souza" uniqKey="D Souza" last="D'Souza">D'Souza</name>
</author>
<author>
<name sortKey="Thorn" sort="Thorn" uniqKey="Thorn" last="Thorn">Thorn</name>
</author>
<author>
<name sortKey="Reddy" sort="Reddy" uniqKey="Reddy" last="Reddy">Reddy</name>
</author>
</analytic>
<series>
<title level="j">Applied and environmental microbiology</title>
<idno type="eISSN">1098-5336</idno>
<imprint>
<date when="1999" type="published">1999</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">A basidiomycetous fungus Flavodon flavus (Klotzsch) Ryvarden (strain 312), isolated from decaying sea grass from a coral lagoon off the west coast of India, mineralized nearly 24% of 14C-labeled synthetic lignin to 14CO2 in 24 days. When grown in low-nitrogen medium (2.4 mM N) this fungus produced three major classes of extracellular lignin-modifying enzymes (LMEs): manganese-dependent peroxidase (MNP), lignin peroxidase (LIP), and laccase. Low MNP and laccase activities were seen in high-nitrogen medium (24 mM N), but no LIP activity was seen. In media containing lignocellulosic substrates such as pine, poplar, or sugarcane bagasse as the sole source of carbon and nitrogen, relatively high MNP and moderate levels of laccases were seen, but LIP production either was not seen or was minimal. LME production was also seen in media prepared with artificial seawater. Fast protein liquid chromatography and isoelectric focusing resolved LMEs into four isozymes each of MNP and LIP, while laccase isozymes were resolved into two groups, one group containing seven isozymes (pIs 4 to 6) and the other group containing at least three isozymes (pIs < 3). The molecular masses of the different isozymes were 43 to 99 kDa for MNP, 40 and 41.5 kDa for LIP, and 43 and 99 kDa for laccase. F. flavus showed effective degradation of various dye pollutants in media prepared with or without artificial seawater. This is the first report on the production of all three major classes of LMEs by F. flavus and points to the bioremediation potential of this organism in terrestrial as well as marine environments.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM">
<PMID Version="1">10224007</PMID>
<DateRevised>
<Year>2020</Year>
<Month>07</Month>
<Day>27</Day>
</DateRevised>
<Article PubModel="Print">
<Journal>
<ISSN IssnType="Electronic">1098-5336</ISSN>
<JournalIssue CitedMedium="Internet">
<Volume>65</Volume>
<Issue>5</Issue>
<PubDate>
<Year>1999</Year>
<Month>May</Month>
</PubDate>
</JournalIssue>
<Title>Applied and environmental microbiology</Title>
<ISOAbbreviation>Appl Environ Microbiol</ISOAbbreviation>
</Journal>
<ArticleTitle>Lignin-modifying enzymes of flavodon flavus, a basidiomycete isolated from a coastal marine environment </ArticleTitle>
<Pagination>
<MedlinePgn>2103-11</MedlinePgn>
</Pagination>
<Abstract>
<AbstractText>A basidiomycetous fungus Flavodon flavus (Klotzsch) Ryvarden (strain 312), isolated from decaying sea grass from a coral lagoon off the west coast of India, mineralized nearly 24% of 14C-labeled synthetic lignin to 14CO2 in 24 days. When grown in low-nitrogen medium (2.4 mM N) this fungus produced three major classes of extracellular lignin-modifying enzymes (LMEs): manganese-dependent peroxidase (MNP), lignin peroxidase (LIP), and laccase. Low MNP and laccase activities were seen in high-nitrogen medium (24 mM N), but no LIP activity was seen. In media containing lignocellulosic substrates such as pine, poplar, or sugarcane bagasse as the sole source of carbon and nitrogen, relatively high MNP and moderate levels of laccases were seen, but LIP production either was not seen or was minimal. LME production was also seen in media prepared with artificial seawater. Fast protein liquid chromatography and isoelectric focusing resolved LMEs into four isozymes each of MNP and LIP, while laccase isozymes were resolved into two groups, one group containing seven isozymes (pIs 4 to 6) and the other group containing at least three isozymes (pIs < 3). The molecular masses of the different isozymes were 43 to 99 kDa for MNP, 40 and 41.5 kDa for LIP, and 43 and 99 kDa for laccase. F. flavus showed effective degradation of various dye pollutants in media prepared with or without artificial seawater. This is the first report on the production of all three major classes of LMEs by F. flavus and points to the bioremediation potential of this organism in terrestrial as well as marine environments.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Raghukumar</LastName>
<Initials>C</Initials>
<AffiliationInfo>
<Affiliation>Department of Microbiology and NSF Center for Microbial Ecology, Michigan State University, East Lansing, Michigan 48824-1101, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>D'Souza</LastName>
<Initials>TM</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Thorn</LastName>
<Initials>RG</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Reddy</LastName>
<Initials>CA</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
</Article>
<MedlineJournalInfo>
<Country>United States</Country>
<MedlineTA>Appl Environ Microbiol</MedlineTA>
<NlmUniqueID>7605801</NlmUniqueID>
<ISSNLinking>0099-2240</ISSNLinking>
</MedlineJournalInfo>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="pubmed">
<Year>1999</Year>
<Month>5</Month>
<Day>1</Day>
<Hour>2</Hour>
<Minute>12</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>1999</Year>
<Month>5</Month>
<Day>1</Day>
<Hour>2</Hour>
<Minute>13</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>1999</Year>
<Month>5</Month>
<Day>1</Day>
<Hour>2</Hour>
<Minute>12</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">10224007</ArticleId>
<ArticleId IdType="pmc">PMC91304</ArticleId>
<ArticleId IdType="doi">10.1128/AEM.65.5.2103-2111.1999</ArticleId>
</ArticleIdList>
<ReferenceList>
<Reference>
<Citation>Biochem J. 1988 Sep 15;254(3):877-83</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">3196301</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Appl Environ Microbiol. 1995 Dec;61(12):4274-7</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16535182</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Appl Environ Microbiol. 1993 Jan;59(1):260-5</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16348850</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nature. 1970 Aug 15;227(5259):680-5</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">5432063</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>J Biotechnol. 1993 Jul;30(1):91-107</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">7763835</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Appl Environ Microbiol. 1993 Sep;59(9):2904-8</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16349039</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Arch Microbiol. 1993;160(1):1-4</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">8352647</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>J Biol Chem. 1969 Aug 25;244(16):4406-12</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">5806584</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Appl Environ Microbiol. 1996 Nov;62(11):4263-7</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16535452</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Annu Rev Microbiol. 1987;41:465-505</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">3318677</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Appl Environ Microbiol. 1984 Jul;48(1):36-40</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16346598</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>FEMS Microbiol Lett. 1990 Jun 1;57(3):221-4</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">2210334</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Appl Environ Microbiol. 1993 Dec;59(12):4010-6</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16349103</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Anal Biochem. 1976 May 7;72:248-54</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">942051</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Arch Microbiol. 1990;153(6):521-7</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">2369262</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Appl Environ Microbiol. 1991 Aug;57(8):2368-75</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">1768105</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Appl Environ Microbiol. 1991 Aug;57(8):2240-5</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">1768094</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Appl Environ Microbiol. 1990 Jun;56(6):1806-12</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16348221</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 004920 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Corpus/biblio.hfd -nk 004920 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    PoplarV1
   |flux=    Main
   |étape=   Corpus
   |type=    RBID
   |clé=     pubmed:10224007
   |texte=   Lignin-modifying enzymes of flavodon flavus, a basidiomycete isolated from a coastal marine environment 
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Corpus/RBID.i   -Sk "pubmed:10224007" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Corpus/biblio.hfd   \
       | NlmPubMed2Wicri -a PoplarV1 

Wicri

This area was generated with Dilib version V0.6.37.
Data generation: Wed Nov 18 12:07:19 2020. Site generation: Wed Nov 18 12:16:31 2020