The genus Cryptosphaeria in the western United States: taxonomy, multilocus phylogeny and a new species, C. multicontinentalis.
Identifieur interne : 001B21 ( Main/Corpus ); précédent : 001B20; suivant : 001B22The genus Cryptosphaeria in the western United States: taxonomy, multilocus phylogeny and a new species, C. multicontinentalis.
Auteurs : Florent P. Trouillas ; Francesca Peduto Hand ; Patrik Inderbitzin ; Walter D. GublerSource :
- Mycologia [ 0027-5514 ]
English descriptors
- KwdEn :
- California (MeSH), Fungal Proteins (genetics), Molecular Sequence Data (MeSH), Multilocus Sequence Typing (MeSH), Nevada (MeSH), Peptide Elongation Factor 1 (genetics), Phylogeny (MeSH), Plant Diseases (microbiology), Populus (microbiology), RNA Polymerase II (genetics), Spores, Fungal (classification), Spores, Fungal (genetics), Spores, Fungal (growth & development), Spores, Fungal (isolation & purification), Tubulin (genetics), Xylariales (classification), Xylariales (genetics), Xylariales (growth & development), Xylariales (isolation & purification).
- MESH :
- chemical , genetics : Fungal Proteins, Peptide Elongation Factor 1, RNA Polymerase II, Tubulin.
- geographic : California, Nevada.
- classification : Spores, Fungal, Xylariales.
- genetics : Spores, Fungal, Xylariales.
- growth & development : Spores, Fungal, Xylariales.
- isolation & purification : Spores, Fungal, Xylariales.
- microbiology : Plant Diseases, Populus.
- Molecular Sequence Data, Multilocus Sequence Typing, Phylogeny.
Abstract
This study investigates the diversity and taxonomy of Cryptosphaeria species occurring in the western United States on the basis of morphological characters and multilocus phylogenetic analyses of the ribosomal internal transcribed spacer region, parts of a β-tubulin gene, the DNA-dependent RNA polymerase II second-largest subunit gene and the nuclear ribosomal large subunit gene. Cryptosphaeria multicontinentalis sp. nov is described from the Sierra Nevada and central coast of California on Populus tremuloides, P. balsamifera subsp. trichocarpa and P. fremontii. Cryptosphaeria pullmanensis is reported from a wide geographic area in the western United States on the main host, P. fremontii. The pathogen C. lignyota is reported for the first time from the Sierra Nevada of California on P. tremuloides. The phylogenetic analyses showed that C. multicontinentalis is a sister species to C. lignyota. Both species were closely related to C. subcutanea and more distantly related to C. pullmanensis. Characteristics of both teleomorph and anamorph of the newly introduced species C. multicontinentalis are described and illustrated.
DOI: 10.3852/15-115
PubMed: 26354808
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Trouillas</name><affiliation><nlm:affiliation>Department of Plant Pathology, University of California, Davis, California 95616 flotrouillas@ucdavis.edu.</nlm:affiliation></affiliation></author><author><name sortKey="Hand, Francesca Peduto" sort="Hand, Francesca Peduto" uniqKey="Hand F" first="Francesca Peduto" last="Hand">Francesca Peduto Hand</name><affiliation><nlm:affiliation>Department of Plant Pathology, Ohio State University, Columbus, Ohio 43210.</nlm:affiliation></affiliation></author><author><name sortKey="Inderbitzin, Patrik" sort="Inderbitzin, Patrik" uniqKey="Inderbitzin P" first="Patrik" last="Inderbitzin">Patrik Inderbitzin</name><affiliation><nlm:affiliation>Department of Plant Pathology, University of California, Davis, California 95616.</nlm:affiliation></affiliation></author><author><name sortKey="Gubler, Walter D" sort="Gubler, Walter D" uniqKey="Gubler W" first="Walter D" last="Gubler">Walter D. Gubler</name><affiliation><nlm:affiliation>Department of Plant Pathology, University of California, Davis, California 95616.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2015">2015 Nov-Dec</date><idno type="RBID">pubmed:26354808</idno><idno type="pmid">26354808</idno><idno type="doi">10.3852/15-115</idno><idno type="wicri:Area/Main/Corpus">001B21</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001B21</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">The genus Cryptosphaeria in the western United States: taxonomy, multilocus phylogeny and a new species, C. multicontinentalis.</title><author><name sortKey="Trouillas, Florent P" sort="Trouillas, Florent P" uniqKey="Trouillas F" first="Florent P" last="Trouillas">Florent P. Trouillas</name><affiliation><nlm:affiliation>Department of Plant Pathology, University of California, Davis, California 95616 flotrouillas@ucdavis.edu.</nlm:affiliation></affiliation></author><author><name sortKey="Hand, Francesca Peduto" sort="Hand, Francesca Peduto" uniqKey="Hand F" first="Francesca Peduto" last="Hand">Francesca Peduto Hand</name><affiliation><nlm:affiliation>Department of Plant Pathology, Ohio State University, Columbus, Ohio 43210.</nlm:affiliation></affiliation></author><author><name sortKey="Inderbitzin, Patrik" sort="Inderbitzin, Patrik" uniqKey="Inderbitzin P" first="Patrik" last="Inderbitzin">Patrik Inderbitzin</name><affiliation><nlm:affiliation>Department of Plant Pathology, University of California, Davis, California 95616.</nlm:affiliation></affiliation></author><author><name sortKey="Gubler, Walter D" sort="Gubler, Walter D" uniqKey="Gubler W" first="Walter D" last="Gubler">Walter D. Gubler</name><affiliation><nlm:affiliation>Department of Plant Pathology, University of California, Davis, California 95616.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Mycologia</title><idno type="ISSN">0027-5514</idno></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>California (MeSH)</term><term>Fungal Proteins (genetics)</term><term>Molecular Sequence Data (MeSH)</term><term>Multilocus Sequence Typing (MeSH)</term><term>Nevada (MeSH)</term><term>Peptide Elongation Factor 1 (genetics)</term><term>Phylogeny (MeSH)</term><term>Plant Diseases (microbiology)</term><term>Populus (microbiology)</term><term>RNA Polymerase II (genetics)</term><term>Spores, Fungal (classification)</term><term>Spores, Fungal (genetics)</term><term>Spores, Fungal (growth & development)</term><term>Spores, Fungal (isolation & purification)</term><term>Tubulin (genetics)</term><term>Xylariales (classification)</term><term>Xylariales (genetics)</term><term>Xylariales (growth & development)</term><term>Xylariales (isolation & purification)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Fungal Proteins</term><term>Peptide Elongation Factor 1</term><term>RNA Polymerase II</term><term>Tubulin</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>California</term><term>Nevada</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Spores, Fungal</term><term>Xylariales</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Spores, Fungal</term><term>Xylariales</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Spores, Fungal</term><term>Xylariales</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Spores, Fungal</term><term>Xylariales</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Diseases</term><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Molecular Sequence Data</term><term>Multilocus Sequence Typing</term><term>Phylogeny</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">This study investigates the diversity and taxonomy of Cryptosphaeria species occurring in the western United States on the basis of morphological characters and multilocus phylogenetic analyses of the ribosomal internal transcribed spacer region, parts of a β-tubulin gene, the DNA-dependent RNA polymerase II second-largest subunit gene and the nuclear ribosomal large subunit gene. Cryptosphaeria multicontinentalis sp. nov is described from the Sierra Nevada and central coast of California on Populus tremuloides, P. balsamifera subsp. trichocarpa and P. fremontii. Cryptosphaeria pullmanensis is reported from a wide geographic area in the western United States on the main host, P. fremontii. The pathogen C. lignyota is reported for the first time from the Sierra Nevada of California on P. tremuloides. The phylogenetic analyses showed that C. multicontinentalis is a sister species to C. lignyota. Both species were closely related to C. subcutanea and more distantly related to C. pullmanensis. Characteristics of both teleomorph and anamorph of the newly introduced species C. multicontinentalis are described and illustrated. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">26354808</PMID><DateCompleted><Year>2016</Year><Month>03</Month><Day>10</Day></DateCompleted><DateRevised><Year>2016</Year><Month>01</Month><Day>07</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0027-5514</ISSN><JournalIssue CitedMedium="Print"><Volume>107</Volume><Issue>6</Issue><PubDate><MedlineDate>2015 Nov-Dec</MedlineDate></PubDate></JournalIssue><Title>Mycologia</Title><ISOAbbreviation>Mycologia</ISOAbbreviation></Journal><ArticleTitle>The genus Cryptosphaeria in the western United States: taxonomy, multilocus phylogeny and a new species, C. multicontinentalis.</ArticleTitle><Pagination><MedlinePgn>1304-13</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3852/15-115</ELocationID><Abstract><AbstractText>This study investigates the diversity and taxonomy of Cryptosphaeria species occurring in the western United States on the basis of morphological characters and multilocus phylogenetic analyses of the ribosomal internal transcribed spacer region, parts of a β-tubulin gene, the DNA-dependent RNA polymerase II second-largest subunit gene and the nuclear ribosomal large subunit gene. Cryptosphaeria multicontinentalis sp. nov is described from the Sierra Nevada and central coast of California on Populus tremuloides, P. balsamifera subsp. trichocarpa and P. fremontii. Cryptosphaeria pullmanensis is reported from a wide geographic area in the western United States on the main host, P. fremontii. The pathogen C. lignyota is reported for the first time from the Sierra Nevada of California on P. tremuloides. The phylogenetic analyses showed that C. multicontinentalis is a sister species to C. lignyota. Both species were closely related to C. subcutanea and more distantly related to C. pullmanensis. Characteristics of both teleomorph and anamorph of the newly introduced species C. multicontinentalis are described and illustrated. </AbstractText><CopyrightInformation>© 2015 by The Mycological Society of America.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Trouillas</LastName><ForeName>Florent P</ForeName><Initials>FP</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, University of California, Davis, California 95616 flotrouillas@ucdavis.edu.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hand</LastName><ForeName>Francesca Peduto</ForeName><Initials>FP</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, Ohio State University, Columbus, Ohio 43210.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Inderbitzin</LastName><ForeName>Patrik</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, University of California, Davis, California 95616.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gubler</LastName><ForeName>Walter D</ForeName><Initials>WD</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, University of California, Davis, California 95616.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2015</Year><Month>09</Month><Day>09</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Mycologia</MedlineTA><NlmUniqueID>0400764</NlmUniqueID><ISSNLinking>0027-5514</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005656">Fungal Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D020648">Peptide Elongation Factor 1</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014404">Tubulin</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 2.7.7.-</RegistryNumber><NameOfSubstance UI="D012319">RNA Polymerase II</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D002140" MajorTopicYN="N" Type="Geographic">California</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005656" MajorTopicYN="N">Fungal Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D058885" MajorTopicYN="N">Multilocus Sequence Typing</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009505" MajorTopicYN="N" Type="Geographic">Nevada</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020648" MajorTopicYN="N">Peptide Elongation Factor 1</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="Y">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012319" MajorTopicYN="N">RNA Polymerase II</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013172" MajorTopicYN="N">Spores, Fungal</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014404" MajorTopicYN="N">Tubulin</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013098" MajorTopicYN="N">Xylariales</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Cryptosphaeria</Keyword><Keyword MajorTopicYN="N">Diatrypaceae</Keyword><Keyword MajorTopicYN="N">Populus</Keyword><Keyword MajorTopicYN="N">phylogeny</Keyword><Keyword MajorTopicYN="N">taxonomy</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2015</Year><Month>05</Month><Day>07</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2015</Year><Month>08</Month><Day>22</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2015</Year><Month>9</Month><Day>11</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2015</Year><Month>9</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2016</Year><Month>3</Month><Day>11</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">26354808</ArticleId><ArticleId IdType="pii">15-115</ArticleId><ArticleId IdType="doi">10.3852/15-115</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document 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