New species of Septoria associated with leaf spot diseases in Iran.
Identifieur interne : 000629 ( Main/Corpus ); précédent : 000628; suivant : 000630New species of Septoria associated with leaf spot diseases in Iran.
Auteurs : Mounes Bakhshi ; Mahdi Arzanlou ; Rasoul Zare ; Johannes Z. Groenewald ; Pedro W. CrousSource :
- Mycologia [ 1557-2536 ]
English descriptors
- KwdEn :
- Ascomycota (classification), Ascomycota (isolation & purification), DNA, Fungal (genetics), DNA, Ribosomal Spacer (genetics), Iran (MeSH), Peptide Elongation Factor 1 (genetics), Phylogeny (MeSH), Plant Diseases (microbiology), Plant Leaves (microbiology), RNA, Ribosomal, 28S (genetics), Sequence Analysis, DNA (MeSH).
- MESH :
- chemical , genetics : DNA, Fungal, DNA, Ribosomal Spacer, Peptide Elongation Factor 1, RNA, Ribosomal, 28S.
- geographic : Iran.
- classification : Ascomycota.
- isolation & purification : Ascomycota.
- microbiology : Plant Diseases, Plant Leaves.
- Phylogeny, Sequence Analysis, DNA.
Abstract
Species of Septoria are commonly associated with leaf spot diseases of a broad range of plant hosts worldwide. During our investigation of fungi associated with leaf spot diseases in northern and northwestern Iran, several Septoria isolates were recovered from symptomatic leaves on different herbaceous and woody plants in the Asteraceae, Betulaceae, and Salicaceae families. These isolates were studied by applying a polyphasic approach including morphological and cultural data and a multigene phylogeny using a combined data set of partial sequences of the 28S nuc rRNA gene (large subunit [28S]), internal transcribed spacer regions and intervening 5.8S nuc rRNA gene (ITS) of the nuc rDNA operon, actin (actA), translation elongation factor 1-α (tef1), calmodulin (cmdA), β-tubulin (tub2), and DNA-directed RNA polymerase II second largest subunit (rpb2). Four novel species are proposed, namely, Septoria eclipticola on Eclipta prostrata, Septoria firouraghina on Cirsium arvense, Septoria guilanensis on Populus deltoides, and Septoria taleshana on Alnus subcordata. All species are illustrated, and their morphology and phylogenetic relationships with other Septoria species are discussed.
DOI: 10.1080/00275514.2019.1669376
PubMed: 31702444
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pubmed:31702444Le document en format XML
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Box 5166614766, Tabriz, Iran.</nlm:affiliation></affiliation></author><author><name sortKey="Zare, Rasoul" sort="Zare, Rasoul" uniqKey="Zare R" first="Rasoul" last="Zare">Rasoul Zare</name><affiliation><nlm:affiliation>Department of Botany, Iranian Research Institute of Plant Protection, P.O. Box 19395-1454, Agricultural Research, Education and Extension Organization (AREEO), Tehran, Iran.</nlm:affiliation></affiliation></author><author><name sortKey="Groenewald, Johannes Z" sort="Groenewald, Johannes Z" uniqKey="Groenewald J" first="Johannes Z" last="Groenewald">Johannes Z. Groenewald</name><affiliation><nlm:affiliation>Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Crous, Pedro W" sort="Crous, Pedro W" uniqKey="Crous P" first="Pedro W" last="Crous">Pedro W. Crous</name><affiliation><nlm:affiliation>Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Department of Genetics, Biochemistry and Microbiology, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, 0002, South Africa.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Laboratory of Phytopathology, Wageningen University and Research Centre (WUR), Droevendaalsesteeg, 6708 PB Wageningen, The Netherlands.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2019">2019 Nov-Dec</date><idno type="RBID">pubmed:31702444</idno><idno type="pmid">31702444</idno><idno type="doi">10.1080/00275514.2019.1669376</idno><idno type="wicri:Area/Main/Corpus">000629</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000629</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">New species of <i>Septoria</i> associated with leaf spot diseases in Iran.</title><author><name sortKey="Bakhshi, Mounes" sort="Bakhshi, Mounes" uniqKey="Bakhshi M" first="Mounes" last="Bakhshi">Mounes Bakhshi</name><affiliation><nlm:affiliation>Department of Botany, Iranian Research Institute of Plant Protection, P.O. Box 19395-1454, Agricultural Research, Education and Extension Organization (AREEO), Tehran, Iran.</nlm:affiliation></affiliation></author><author><name sortKey="Arzanlou, Mahdi" sort="Arzanlou, Mahdi" uniqKey="Arzanlou M" first="Mahdi" last="Arzanlou">Mahdi Arzanlou</name><affiliation><nlm:affiliation>Plant Protection Department, Faculty of Agriculture, University of Tabriz, P.O. Box 5166614766, Tabriz, Iran.</nlm:affiliation></affiliation></author><author><name sortKey="Zare, Rasoul" sort="Zare, Rasoul" uniqKey="Zare R" first="Rasoul" last="Zare">Rasoul Zare</name><affiliation><nlm:affiliation>Department of Botany, Iranian Research Institute of Plant Protection, P.O. Box 19395-1454, Agricultural Research, Education and Extension Organization (AREEO), Tehran, Iran.</nlm:affiliation></affiliation></author><author><name sortKey="Groenewald, Johannes Z" sort="Groenewald, Johannes Z" uniqKey="Groenewald J" first="Johannes Z" last="Groenewald">Johannes Z. Groenewald</name><affiliation><nlm:affiliation>Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Crous, Pedro W" sort="Crous, Pedro W" uniqKey="Crous P" first="Pedro W" last="Crous">Pedro W. Crous</name><affiliation><nlm:affiliation>Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Department of Genetics, Biochemistry and Microbiology, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, 0002, South Africa.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Laboratory of Phytopathology, Wageningen University and Research Centre (WUR), Droevendaalsesteeg, 6708 PB Wageningen, The Netherlands.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Mycologia</title><idno type="eISSN">1557-2536</idno></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Ascomycota (classification)</term><term>Ascomycota (isolation & purification)</term><term>DNA, Fungal (genetics)</term><term>DNA, Ribosomal Spacer (genetics)</term><term>Iran (MeSH)</term><term>Peptide Elongation Factor 1 (genetics)</term><term>Phylogeny (MeSH)</term><term>Plant Diseases (microbiology)</term><term>Plant Leaves (microbiology)</term><term>RNA, Ribosomal, 28S (genetics)</term><term>Sequence Analysis, DNA (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Fungal</term><term>DNA, Ribosomal Spacer</term><term>Peptide Elongation Factor 1</term><term>RNA, Ribosomal, 28S</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Iran</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Ascomycota</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Ascomycota</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Diseases</term><term>Plant Leaves</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Phylogeny</term><term>Sequence Analysis, DNA</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Species of <i>Septoria</i> are commonly associated with leaf spot diseases of a broad range of plant hosts worldwide. During our investigation of fungi associated with leaf spot diseases in northern and northwestern Iran, several <i>Septoria</i> isolates were recovered from symptomatic leaves on different herbaceous and woody plants in the Asteraceae, Betulaceae, and Salicaceae families. These isolates were studied by applying a polyphasic approach including morphological and cultural data and a multigene phylogeny using a combined data set of partial sequences of the 28S nuc rRNA gene (large subunit [28S]), internal transcribed spacer regions and intervening 5.8S nuc rRNA gene (ITS) of the nuc rDNA operon, actin (<i>actA</i>), translation elongation factor 1-α (<i>tef1</i>), calmodulin (<i>cmdA</i>), β-tubulin (<i>tub2</i>), and DNA-directed RNA polymerase II second largest subunit (<i>rpb2</i>). Four novel species are proposed, namely, <i>Septoria eclipticola</i> on <i>Eclipta prostrata, Septoria firouraghina</i> on <i>Cirsium arvense, Septoria guilanensis</i> on <i>Populus deltoides</i>, and <i>Septoria taleshana</i> on <i>Alnus subcordata</i>. All species are illustrated, and their morphology and phylogenetic relationships with other <i>Septoria</i> species are discussed.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">31702444</PMID><DateCompleted><Year>2020</Year><Month>06</Month><Day>26</Day></DateCompleted><DateRevised><Year>2020</Year><Month>06</Month><Day>26</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1557-2536</ISSN><JournalIssue CitedMedium="Internet"><Volume>111</Volume><Issue>6</Issue><PubDate><MedlineDate>2019 Nov-Dec</MedlineDate></PubDate></JournalIssue><Title>Mycologia</Title><ISOAbbreviation>Mycologia</ISOAbbreviation></Journal><ArticleTitle>New species of <i>Septoria</i> associated with leaf spot diseases in Iran.</ArticleTitle><Pagination><MedlinePgn>1056-1071</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1080/00275514.2019.1669376</ELocationID><Abstract><AbstractText>Species of <i>Septoria</i> are commonly associated with leaf spot diseases of a broad range of plant hosts worldwide. During our investigation of fungi associated with leaf spot diseases in northern and northwestern Iran, several <i>Septoria</i> isolates were recovered from symptomatic leaves on different herbaceous and woody plants in the Asteraceae, Betulaceae, and Salicaceae families. These isolates were studied by applying a polyphasic approach including morphological and cultural data and a multigene phylogeny using a combined data set of partial sequences of the 28S nuc rRNA gene (large subunit [28S]), internal transcribed spacer regions and intervening 5.8S nuc rRNA gene (ITS) of the nuc rDNA operon, actin (<i>actA</i>), translation elongation factor 1-α (<i>tef1</i>), calmodulin (<i>cmdA</i>), β-tubulin (<i>tub2</i>), and DNA-directed RNA polymerase II second largest subunit (<i>rpb2</i>). Four novel species are proposed, namely, <i>Septoria eclipticola</i> on <i>Eclipta prostrata, Septoria firouraghina</i> on <i>Cirsium arvense, Septoria guilanensis</i> on <i>Populus deltoides</i>, and <i>Septoria taleshana</i> on <i>Alnus subcordata</i>. All species are illustrated, and their morphology and phylogenetic relationships with other <i>Septoria</i> species are discussed.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Bakhshi</LastName><ForeName>Mounes</ForeName><Initials>M</Initials><Identifier Source="ORCID">0000-0002-8404-1357</Identifier><AffiliationInfo><Affiliation>Department of Botany, Iranian Research Institute of Plant Protection, P.O. Box 19395-1454, Agricultural Research, Education and Extension Organization (AREEO), Tehran, Iran.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Arzanlou</LastName><ForeName>Mahdi</ForeName><Initials>M</Initials><Identifier Source="ORCID">0000-0001-6159-3629</Identifier><AffiliationInfo><Affiliation>Plant Protection Department, Faculty of Agriculture, University of Tabriz, P.O. Box 5166614766, Tabriz, Iran.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zare</LastName><ForeName>Rasoul</ForeName><Initials>R</Initials><Identifier Source="ORCID">0000-0002-5931-4560</Identifier><AffiliationInfo><Affiliation>Department of Botany, Iranian Research Institute of Plant Protection, P.O. Box 19395-1454, Agricultural Research, Education and Extension Organization (AREEO), Tehran, Iran.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Groenewald</LastName><ForeName>Johannes Z</ForeName><Initials>JZ</Initials><Identifier Source="ORCID">0000-0002-9474-6246</Identifier><AffiliationInfo><Affiliation>Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Crous</LastName><ForeName>Pedro W</ForeName><Initials>PW</Initials><Identifier Source="ORCID">0000-0001-9085-8825</Identifier><AffiliationInfo><Affiliation>Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Genetics, Biochemistry and Microbiology, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, 0002, South Africa.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Laboratory of Phytopathology, Wageningen University and Research Centre (WUR), Droevendaalsesteeg, 6708 PB Wageningen, The Netherlands.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2019</Year><Month>11</Month><Day>08</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Mycologia</MedlineTA><NlmUniqueID>0400764</NlmUniqueID><ISSNLinking>0027-5514</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004271">DNA, Fungal</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D021903">DNA, Ribosomal Spacer</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D020648">Peptide Elongation Factor 1</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012339">RNA, Ribosomal, 28S</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D001203" MajorTopicYN="N">Ascomycota</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004271" MajorTopicYN="N">DNA, Fungal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D021903" MajorTopicYN="N">DNA, Ribosomal Spacer</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D007492" MajorTopicYN="N" Type="Geographic">Iran</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020648" MajorTopicYN="N">Peptide Elongation Factor 1</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="Y">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012339" MajorTopicYN="N">RNA, Ribosomal, 28S</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">4 new taxa</Keyword><Keyword MajorTopicYN="Y">Leaf spot</Keyword><Keyword MajorTopicYN="Y">Mycosphaerellaceae</Keyword><Keyword MajorTopicYN="Y">phylogeny</Keyword><Keyword MajorTopicYN="Y">plant pathogens</Keyword><Keyword MajorTopicYN="Y">systematics</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2019</Year><Month>11</Month><Day>9</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>6</Month><Day>27</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2019</Year><Month>11</Month><Day>9</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">31702444</ArticleId><ArticleId IdType="doi">10.1080/00275514.2019.1669376</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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