New insights into the evolution of host specificity of three Penicillium species and the pathogenicity of P. Italicum involving the infection of Valencia orange (Citrus sinensis).
Identifieur interne : 000096 ( Main/Exploration ); précédent : 000095; suivant : 000097New insights into the evolution of host specificity of three Penicillium species and the pathogenicity of P. Italicum involving the infection of Valencia orange (Citrus sinensis).
Auteurs : Liang Gong [République populaire de Chine] ; Yongfeng Liu [République populaire de Chine] ; Yehui Xiong [République populaire de Chine] ; Taotao Li [République populaire de Chine] ; Chunxiao Yin [République populaire de Chine] ; Juanni Zhao [République populaire de Chine] ; Jialin Yu [République populaire de Chine] ; Qi Yin [République populaire de Chine] ; Vijai Kumar Gupta [Estonie] ; Yueming Jiang [République populaire de Chine] ; Xuewu Duan [République populaire de Chine]Source :
- Virulence [ 2150-5608 ] ; 2020.
Abstract
Blue and green molds, the common phenotypes of post-harvest diseases in fruits, are mainly caused by Penicillium fungal species, including P. italicum, P. digitatum, and P. expansum. We sequenced and assembled the genome of a P. italicum strain, which contains 31,034,623 bp with 361 scaffolds and 627 contigs. The mechanisms underlying the evolution of host specificity among the analyzed Penicillium species were associated with the expansion of protein families, genome restructuring, horizontal gene transfer, and positive selection pressure. A dual-transcriptome analysis following the infection of Valencia orange (Citrus sinensis) by P. italicum resulted in the annotation of 9,307 P. italicum genes and 24,591 Valencia orange genes. The pathogenicity of P. italicum may be due to the activation of effectors, including 51 small secreted cysteine-rich proteins, 110 carbohydrate-active enzymes, and 12 G protein-coupled receptors. Additionally, 211 metabolites related to the interactions between P. italicum and Valencia orange were identified by gas chromatography-time of flight mass spectrography, three of which were further confirmed by ultra-high performance liquid chromatography triple quadrupole mass spectrometry. A metabolomics analysis indicated that P. italicum pathogenicity is associated with the sphingolipid and salicylic acid signaling pathways. Moreover, a correlation analysis between the metabolite contents and gene expression levels suggested that P. italicum induces carbohydrate metabolism in Valencia orange fruits as part of its infection strategy. This study provides useful information regarding the genomic determinants that drive the evolution of host specificity in Penicillium species and clarifies the host-plant specificity during the infection of Valencia orange by P. italicum.
IMPORTANCE
P. italicum GL_Gan1, a local strain in Guangzhou, China, was sequenced. Comparison of the genome of
DOI: 10.1080/21505594.2020.1773038
PubMed: 32525727
PubMed Central: PMC7549954
Affiliations:
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Yin</name><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center of Economic Botany, Core Botanical Gardens, 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Chine</country><wicri:regionArea>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Yu, Jialin" sort="Yu, Jialin" uniqKey="Yu J" first="Jialin" last="Yu">Jialin Yu</name><affiliation wicri:level="3"><nlm:affiliation>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Yin, Qi" sort="Yin, Qi" uniqKey="Yin Q" first="Qi" last="Yin">Qi Yin</name><affiliation wicri:level="3"><nlm:affiliation>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Gupta, Vijai Kumar" sort="Gupta, Vijai Kumar" uniqKey="Gupta V" first="Vijai Kumar" last="Gupta">Vijai Kumar Gupta</name><affiliation wicri:level="1"><nlm:affiliation>Department of Chemistry and Biotechnology, ERA Chair of Green Chemistry, School of Science, Tallinn University of Technology , Tallinn, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Department of Chemistry and Biotechnology, ERA Chair of Green Chemistry, School of Science, Tallinn University of Technology , Tallinn</wicri:regionArea><wicri:noRegion>Tallinn</wicri:noRegion></affiliation></author><author><name sortKey="Jiang, Yueming" sort="Jiang, Yueming" uniqKey="Jiang Y" first="Yueming" last="Jiang">Yueming Jiang</name><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Duan, Xuewu" sort="Duan, Xuewu" uniqKey="Duan X" first="Xuewu" last="Duan">Xuewu Duan</name><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , 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Italicum</i> involving the infection of Valencia orange (<i>Citrus sinensis</i>).</title><author><name sortKey="Gong, Liang" sort="Gong, Liang" uniqKey="Gong L" first="Liang" last="Gong">Liang Gong</name><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Liu, Yongfeng" sort="Liu, Yongfeng" uniqKey="Liu Y" first="Yongfeng" last="Liu">Yongfeng Liu</name><affiliation wicri:level="3"><nlm:affiliation>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Xiong, Yehui" sort="Xiong, Yehui" uniqKey="Xiong Y" first="Yehui" last="Xiong">Yehui Xiong</name><affiliation wicri:level="3"><nlm:affiliation>Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences, Tsinghua University , Beijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences, Tsinghua University , Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Li, Taotao" sort="Li, Taotao" uniqKey="Li T" first="Taotao" last="Li">Taotao Li</name><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Yin, Chunxiao" sort="Yin, Chunxiao" uniqKey="Yin C" first="Chunxiao" last="Yin">Chunxiao Yin</name><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Zhao, Juanni" sort="Zhao, Juanni" uniqKey="Zhao J" first="Juanni" last="Zhao">Juanni Zhao</name><affiliation wicri:level="3"><nlm:affiliation>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Yu, Jialin" sort="Yu, Jialin" uniqKey="Yu J" first="Jialin" last="Yu">Jialin Yu</name><affiliation wicri:level="3"><nlm:affiliation>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Yin, Qi" sort="Yin, Qi" uniqKey="Yin Q" first="Qi" last="Yin">Qi Yin</name><affiliation wicri:level="3"><nlm:affiliation>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Gupta, Vijai Kumar" sort="Gupta, Vijai Kumar" uniqKey="Gupta V" first="Vijai Kumar" last="Gupta">Vijai Kumar Gupta</name><affiliation wicri:level="1"><nlm:affiliation>Department of Chemistry and Biotechnology, ERA Chair of Green Chemistry, School of Science, Tallinn University of Technology , Tallinn, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Department of Chemistry and Biotechnology, ERA Chair of Green Chemistry, School of Science, Tallinn University of Technology , Tallinn</wicri:regionArea><wicri:noRegion>Tallinn</wicri:noRegion></affiliation></author><author><name sortKey="Jiang, Yueming" sort="Jiang, Yueming" uniqKey="Jiang Y" first="Yueming" last="Jiang">Yueming Jiang</name><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Duan, Xuewu" sort="Duan, Xuewu" uniqKey="Duan X" first="Xuewu" last="Duan">Xuewu Duan</name><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author></analytic><series><title level="j">Virulence</title><idno type="eISSN">2150-5608</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Blue and green molds, the common phenotypes of post-harvest diseases in fruits, are mainly caused by<i> Penicillium </i>fungal species, including<i> P. italicum, P. digitatum,</i> and <i>P. expansum</i>. We sequenced and assembled the genome of a <i>P. italicum </i>strain, which contains 31,034,623 bp with 361 scaffolds and 627 contigs. The mechanisms underlying the evolution of host specificity among the analyzed <i>Penicillium </i>species were associated with the expansion of protein families, genome restructuring, horizontal gene transfer, and positive selection pressure. A dual-transcriptome analysis following the infection of Valencia orange <i>(Citrus sinensis)</i> by <i>P. italicum </i>resulted in the annotation of 9,307 <i>P. italicum</i> genes and 24,591 Valencia orange genes. The pathogenicity of<i> P. italicum </i>may be due to the activation of effectors, including 51 small secreted cysteine-rich proteins, 110 carbohydrate-active enzymes, and 12 G protein-coupled receptors. Additionally, 211 metabolites related to the interactions between<i> P. italicum </i>and Valencia orange were identified by gas chromatography-time of flight mass spectrography, three of which were further confirmed by ultra-high performance liquid chromatography triple quadrupole mass spectrometry. A metabolomics analysis indicated that <i>P. italicum </i>pathogenicity is associated with the sphingolipid and salicylic acid signaling pathways. Moreover, a correlation analysis between the metabolite contents and gene expression levels suggested that<i> P. italicum </i>induces carbohydrate metabolism in Valencia orange fruits as part of its infection strategy. This study provides useful information regarding the genomic determinants that drive the evolution of host specificity in<i> Penicillium </i>species and clarifies the host-plant specificity during the infection of Valencia orange by <i>P. italicum</i>.</div><div type="abstract" xml:lang="en"><p><b>IMPORTANCE</b></p><p>P. italicum GL_Gan1, a local strain in Guangzhou, China, was sequenced. Comparison of the genome of </p></div></front></TEI><pubmed><MedlineCitation Status="In-Process" Owner="NLM"><PMID Version="1">32525727</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>23</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">2150-5608</ISSN><JournalIssue CitedMedium="Internet"><Volume>11</Volume><Issue>1</Issue><PubDate><Year>2020</Year><Month>01</Month><Day>01</Day></PubDate></JournalIssue><Title>Virulence</Title><ISOAbbreviation>Virulence</ISOAbbreviation></Journal><ArticleTitle>New insights into the evolution of host specificity of three <i>Penicillium</i> species and the pathogenicity of <i>P. Italicum</i> involving the infection of Valencia orange (<i>Citrus sinensis</i>).</ArticleTitle><Pagination><MedlinePgn>748-768</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1080/21505594.2020.1773038</ELocationID><Abstract><AbstractText>Blue and green molds, the common phenotypes of post-harvest diseases in fruits, are mainly caused by<i> Penicillium </i>fungal species, including<i> P. italicum, P. digitatum,</i> and <i>P. expansum</i>. We sequenced and assembled the genome of a <i>P. italicum </i>strain, which contains 31,034,623 bp with 361 scaffolds and 627 contigs. The mechanisms underlying the evolution of host specificity among the analyzed <i>Penicillium </i>species were associated with the expansion of protein families, genome restructuring, horizontal gene transfer, and positive selection pressure. A dual-transcriptome analysis following the infection of Valencia orange <i>(Citrus sinensis)</i> by <i>P. italicum </i>resulted in the annotation of 9,307 <i>P. italicum</i> genes and 24,591 Valencia orange genes. The pathogenicity of<i> P. italicum </i>may be due to the activation of effectors, including 51 small secreted cysteine-rich proteins, 110 carbohydrate-active enzymes, and 12 G protein-coupled receptors. Additionally, 211 metabolites related to the interactions between<i> P. italicum </i>and Valencia orange were identified by gas chromatography-time of flight mass spectrography, three of which were further confirmed by ultra-high performance liquid chromatography triple quadrupole mass spectrometry. A metabolomics analysis indicated that <i>P. italicum </i>pathogenicity is associated with the sphingolipid and salicylic acid signaling pathways. Moreover, a correlation analysis between the metabolite contents and gene expression levels suggested that<i> P. italicum </i>induces carbohydrate metabolism in Valencia orange fruits as part of its infection strategy. This study provides useful information regarding the genomic determinants that drive the evolution of host specificity in<i> Penicillium </i>species and clarifies the host-plant specificity during the infection of Valencia orange by <i>P. italicum</i>.</AbstractText><AbstractText Label="IMPORTANCE">P. italicum GL_Gan1, a local strain in Guangzhou, China, was sequenced. Comparison of the genome of <i>P. italicum</i> GL_Gan1 with other pathogenic <i>Penicillium</i> species, <i>P. digitatum</i> and <i>P. expansum</i>, revealed that the expansion of protein families, genome restructuring, HGT, and positive selection pressure were related to the host range expansion of the analyzed <i>Penicillium</i> species. Moreover, gene gains or losses might be associated with the speciation of these <i>Penicillium</i> species. In addition, the molecular basis of host-plant specificity during the infection of Valencia orange (<i>Citrus sinensis</i>) by <i>P. italicum</i> was also elucidated by transcriptomic and metabolomics analysis. The data presented herein may be useful for further elucidating the molecular basis of the evolution of host specificity of <i>Penicillium</i> species and for illustrating the host-plant specificity during the infection of Valencia orange by <i>P. italicum</i>.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Gong</LastName><ForeName>Liang</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Liu</LastName><ForeName>Yongfeng</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xiong</LastName><ForeName>Yehui</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences, Tsinghua University , Beijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Taotao</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yin</LastName><ForeName>Chunxiao</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhao</LastName><ForeName>Juanni</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yu</LastName><ForeName>Jialin</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yin</LastName><ForeName>Qi</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>BGI PathoGenesis Pharmaceutical Technology Co., Ltd, BGI-Shenzhen , Shenzhen, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gupta</LastName><ForeName>Vijai Kumar</ForeName><Initials>VK</Initials><AffiliationInfo><Affiliation>Department of Chemistry and Biotechnology, ERA Chair of Green Chemistry, School of Science, Tallinn University of Technology , Tallinn, Estonia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jiang</LastName><ForeName>Yueming</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Duan</LastName><ForeName>Xuewu</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>Key Laboratory of Plant Resource Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences , Guangzhou, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences , Guangzhou, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory of Post-Harvest Handling of Fruits, Ministry of Agriculture , Guangzhou, China.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Virulence</MedlineTA><NlmUniqueID>101531386</NlmUniqueID><ISSNLinking>2150-5594</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y"> Penicillium species</Keyword><Keyword MajorTopicYN="Y"> p. italicum </Keyword><Keyword MajorTopicYN="Y">evolution of host specificity</Keyword><Keyword MajorTopicYN="Y">genome comparison</Keyword><Keyword MajorTopicYN="Y">genomics</Keyword><Keyword MajorTopicYN="Y">metabolomics</Keyword><Keyword MajorTopicYN="Y">pathogenicity</Keyword><Keyword MajorTopicYN="Y">transcriptomics</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>6</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>6</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>6</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">32525727</ArticleId><ArticleId 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IdType="pubmed">15034147</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Estonie</li><li>République populaire de Chine</li></country><region><li>Guangdong</li></region><settlement><li>Jiangmen</li><li>Pékin</li><li>Shenzhen</li></settlement></list><tree><country name="République populaire de Chine"><region name="Guangdong"><name sortKey="Gong, Liang" sort="Gong, Liang" uniqKey="Gong L" first="Liang" last="Gong">Liang Gong</name></region><name sortKey="Duan, Xuewu" sort="Duan, Xuewu" uniqKey="Duan X" first="Xuewu" last="Duan">Xuewu Duan</name><name sortKey="Duan, Xuewu" sort="Duan, Xuewu" uniqKey="Duan X" first="Xuewu" last="Duan">Xuewu Duan</name><name sortKey="Duan, Xuewu" sort="Duan, Xuewu" uniqKey="Duan X" first="Xuewu" last="Duan">Xuewu Duan</name><name sortKey="Gong, Liang" sort="Gong, Liang" uniqKey="Gong L" first="Liang" last="Gong">Liang Gong</name><name sortKey="Gong, Liang" sort="Gong, Liang" uniqKey="Gong L" first="Liang" last="Gong">Liang Gong</name><name sortKey="Jiang, Yueming" sort="Jiang, Yueming" uniqKey="Jiang Y" first="Yueming" last="Jiang">Yueming Jiang</name><name sortKey="Jiang, Yueming" sort="Jiang, Yueming" uniqKey="Jiang Y" first="Yueming" last="Jiang">Yueming Jiang</name><name sortKey="Jiang, Yueming" sort="Jiang, Yueming" uniqKey="Jiang Y" first="Yueming" last="Jiang">Yueming Jiang</name><name sortKey="Li, Taotao" sort="Li, Taotao" uniqKey="Li T" first="Taotao" last="Li">Taotao Li</name><name sortKey="Li, Taotao" sort="Li, Taotao" uniqKey="Li T" first="Taotao" last="Li">Taotao Li</name><name sortKey="Li, Taotao" sort="Li, Taotao" uniqKey="Li T" first="Taotao" last="Li">Taotao Li</name><name sortKey="Liu, Yongfeng" sort="Liu, Yongfeng" uniqKey="Liu Y" first="Yongfeng" last="Liu">Yongfeng Liu</name><name sortKey="Xiong, Yehui" sort="Xiong, Yehui" uniqKey="Xiong Y" first="Yehui" last="Xiong">Yehui Xiong</name><name sortKey="Yin, Chunxiao" sort="Yin, Chunxiao" uniqKey="Yin C" first="Chunxiao" last="Yin">Chunxiao Yin</name><name sortKey="Yin, Chunxiao" sort="Yin, Chunxiao" uniqKey="Yin C" first="Chunxiao" last="Yin">Chunxiao Yin</name><name sortKey="Yin, Chunxiao" sort="Yin, Chunxiao" uniqKey="Yin C" first="Chunxiao" last="Yin">Chunxiao Yin</name><name sortKey="Yin, Qi" sort="Yin, Qi" uniqKey="Yin Q" first="Qi" last="Yin">Qi Yin</name><name sortKey="Yu, Jialin" sort="Yu, Jialin" uniqKey="Yu J" first="Jialin" last="Yu">Jialin Yu</name><name sortKey="Zhao, Juanni" sort="Zhao, Juanni" uniqKey="Zhao J" first="Juanni" last="Zhao">Juanni Zhao</name></country><country name="Estonie"><noRegion><name sortKey="Gupta, Vijai Kumar" sort="Gupta, Vijai Kumar" uniqKey="Gupta V" first="Vijai Kumar" last="Gupta">Vijai Kumar Gupta</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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|texte= New insights into the evolution of host specificity of three Penicillium species and the pathogenicity of P. Italicum involving the infection of Valencia orange (Citrus sinensis).
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