| Ident. | Authors (with country if any) | Title |
|---|
| 000207 (2020) |
Bingzhi Jiang [République populaire de Chine] ; Yanbo Cheng [République populaire de Chine] ; Zhandong Cai [République populaire de Chine] ; Mu Li [République populaire de Chine] ; Ze Jiang [République populaire de Chine] ; Ruirui Ma [République populaire de Chine] ; Yeshan Yuan [République populaire de Chine] ; Qiuju Xia [République populaire de Chine] ; Hai Nian [République populaire de Chine] | Fine mapping of a Phytophthora-resistance locus RpsGZ in soybean using genotyping-by-sequencing. |
| 000243 (2020) |
Ben N. Mansfeld [États-Unis] ; Marivi Colle [États-Unis] ; Chunqiu Zhang [États-Unis, République populaire de Chine] ; Ying-Chen Lin [États-Unis] ; Rebecca Grumet [États-Unis] | Developmentally regulated activation of defense allows for rapid inhibition of infection in age-related resistance to Phytophthora capsici in cucumber fruit. |
| 000478 (2019) |
Xiao Ma [République populaire de Chine] ; Wen-Xian Gai [République populaire de Chine] ; Yi-Ming Qiao [République populaire de Chine] ; Muhammad Ali [République populaire de Chine] ; Ai-Min Wei [République populaire de Chine] ; De-Xu Luo [République populaire de Chine] ; Quan-Hui Li [République populaire de Chine] ; Zhen-Hui Gong [République populaire de Chine] | Identification of CBL and CIPK gene families and functional characterization of CaCIPK1 under Phytophthora capsici in pepper (Capsicum annuum L.). |
| 000633 (2018) |
Roxane Roquigny [Canada] ; Amy Novinscak [Canada] ; Tanya Arseneault [Canada] ; David L. Joly [Canada] ; Martin Filion [Canada] | Transcriptome alteration in Phytophthora infestans in response to phenazine-1-carboxylic acid production by Pseudomonas fluorescens strain LBUM223. |
| 000683 (2018) |
Rômulo P M. Lima [Brésil] ; Maiara Curtolo [Brésil] ; Marcus V. Merfa [Brésil, États-Unis] ; Mariângela Cristofani-Yaly [Brésil] ; Marcos A. Machado [Brésil] | QTLs and eQTLs mapping related to citrandarins' resistance to citrus gummosis disease. |
| 000820 (2018) |
Kyle Fletcher [États-Unis] ; Steven J. Klosterman [États-Unis] ; Lida Derevnina [États-Unis, Royaume-Uni] ; Frank Martin [États-Unis] ; Lien D. Bertier [États-Unis] ; Steven Koike [États-Unis] ; Sebastian Reyes-Chin-Wo [États-Unis] ; Beiquan Mou [États-Unis] ; Richard Michelmore [États-Unis] | Comparative genomics of downy mildews reveals potential adaptations to biotrophy. |
| 000828 (2018) |
Marianne Elliott [États-Unis] ; Jennifer Yuzon [États-Unis] ; Mathu Malar C [Inde] ; Sucheta Tripathy [Inde] ; Mai Bui [États-Unis] ; Gary A. Chastagner [États-Unis] ; Katie Coats [États-Unis] ; David M. Rizzo [États-Unis] ; Matteo Garbelotto [États-Unis] ; Takao Kasuga [États-Unis] | Characterization of phenotypic variation and genome aberrations observed among Phytophthora ramorum isolates from diverse hosts. |
| 000868 (2018) |
Kelly Botero [Colombie] ; Silvia Restrepo [Colombie] ; Andres Pinz N [Colombie] | A genome-scale metabolic model of potato late blight suggests a photosynthesis suppression mechanism. |
| 000931 (2017) |
Audrey M V. Ah-Fong [États-Unis] ; Kyoung Su Kim [États-Unis, Corée du Sud] ; Howard S. Judelson [États-Unis] | RNA-seq of life stages of the oomycete Phytophthora infestans reveals dynamic changes in metabolic, signal transduction, and pathogenesis genes and a major role for calcium signaling in development. |
| 000974 (2017) |
Audrey M V. Ah-Fong [États-Unis] ; Jolly Shrivastava [États-Unis] ; Howard S. Judelson [États-Unis] | Lifestyle, gene gain and loss, and transcriptional remodeling cause divergence in the transcriptomes of Phytophthora infestans and Pythium ultimum during potato tuber colonization. |
| 000A36 (2017) |
Aladje Baldé [Portugal, Guinée-Bissau] ; Dina Neves [Portugal] ; Francisco J. García-Breijo [Espagne] ; Maria Salomé Pais [Portugal] ; Alfredo Cravador [Portugal] | De novo assembly of Phlomis purpurea after challenging with Phytophthora cinnamomi. |
| 000B08 (2016) |
Andrew S. Fister [États-Unis] ; Luis C. Mejia [Panama] ; Yufan Zhang [États-Unis] ; Edward Allen Herre [Panama] ; Siela N. Maximova [États-Unis] ; Mark J. Guiltinan [États-Unis] | Theobroma cacao L. pathogenesis-related gene tandem array members show diverse expression dynamics in response to pathogen colonization. |
| 000C09 (2016) |
Takao Kasuga [États-Unis] ; Mai Bui [États-Unis] ; Elizabeth Bernhardt [États-Unis] ; Tedmund Swiecki [États-Unis] ; Kamyar Aram [États-Unis] ; Liliana M. Cano [États-Unis] ; Joan Webber [Royaume-Uni] ; Clive Brasier [Royaume-Uni] ; Caroline Press [États-Unis] ; Niklaus J. Grünwald [États-Unis] ; David M. Rizzo [États-Unis] ; Matteo Garbelotto [États-Unis] | Host-induced aneuploidy and phenotypic diversification in the Sudden Oak Death pathogen Phytophthora ramorum. |
| 000C23 (2016) |
Rhiannon Schneider [États-Unis] ; William Rolling [États-Unis] ; Qijian Song [États-Unis] ; Perry Cregan [États-Unis] ; Anne E. Dorrance [États-Unis] ; Leah K. Mchale [États-Unis] | Genome-wide association mapping of partial resistance to Phytophthora sojae in soybean plant introductions from the Republic of Korea. |
| 000C66 (2016) |
Xiao-Wen Wang [République populaire de Chine] ; Li-Yun Guo [République populaire de Chine] ; Miao Han [République populaire de Chine] ; Kun Shan [République populaire de Chine] | Diversity, evolution and expression profiles of histone acetyltransferases and deacetylases in oomycetes. |
| 000C75 (2016) |
Chaoyun Hao [République populaire de Chine] ; Zhiqiang Xia [République populaire de Chine] ; Rui Fan [République populaire de Chine] ; Lehe Tan [République populaire de Chine] ; Lisong Hu [République populaire de Chine] ; Baoduo Wu [République populaire de Chine] ; Huasong Wu [République populaire de Chine] | De novo transcriptome sequencing of black pepper (Piper nigrum L.) and an analysis of genes involved in phenylpropanoid metabolism in response to Phytophthora capsici. |
| 000E53 (2015) |
Rahul Sharma [Allemagne] ; Xiaojuan Xia [Allemagne] ; Liliana M. Cano [Royaume-Uni, États-Unis] ; Edouard Evangelisti [Royaume-Uni] ; Eric Kemen [Allemagne] ; Howard Judelson [États-Unis] ; Stan Oome [Pays-Bas] ; Christine Sambles [Royaume-Uni] ; D Johan Van Den Hoogen [Pays-Bas] ; Miloslav Kitner [République tchèque] ; Joël Klein [Pays-Bas] ; Harold J G. Meijer [Pays-Bas] ; Otmar Spring [Allemagne] ; Joe Win [Royaume-Uni] ; Reinhard Zipper [Allemagne] ; Helge B. Bode [Allemagne] ; Francine Govers [Pays-Bas] ; Sophien Kamoun [Royaume-Uni] ; Sebastian Schornack [Royaume-Uni] ; David J. Studholme [Royaume-Uni] ; Guido Van Den Ackerveken [Pays-Bas] ; Marco Thines [Allemagne] | Genome analyses of the sunflower pathogen Plasmopara halstedii provide insights into effector evolution in downy mildews and Phytophthora. |
| 000E95 (2015) |
Sara Hosseini [Suède] ; Malin Elfstrand [Suède] ; Fredrik Heyman [Suède] ; Dan Funck Jensen [Suède] ; Magnus Karlsson [Suède] | Deciphering common and specific transcriptional immune responses in pea towards the oomycete pathogens Aphanomyces euteiches and Phytophthora pisi. |
| 000F66 (2014) |
Xiao-Ren Chen [République populaire de Chine] ; Bo-Yue Zhang ; Yu-Ping Xing ; Qi-Yuan Li ; Yan-Peng Li ; Yun-Hui Tong ; Jing-You Xu | Transcriptomic analysis of the phytopathogenic oomycete Phytophthora cactorum provides insights into infection-related effectors. |
| 000F67 (2014) |
Agnès Attard ; Edouard Evangelisti ; Naïma Kebdani-Minet ; Franck Panabières ; Emeline Deleury ; Cindy Maggio ; Michel Ponchet ; Mathieu Gourgues [France] | Transcriptome dynamics of Arabidopsis thaliana root penetration by the oomycete pathogen Phytophthora parasitica. |
| 000F99 (2014) |
Ashfaq Ali ; Erik Alexandersson ; Marianne Sandin ; Svante Resjö ; Marit Lenman ; Pete Hedley ; Fredrik Levander ; Erik Andreasson [Suède] | Quantitative proteomics and transcriptomics of potato in response to Phytophthora infestans in compatible and incompatible interactions. |
| 001006 (2014) |
Therese Bengtsson ; Deborah Weighill ; Estelle Proux-Wéra ; Fredrik Levander ; Svante Resjö ; Dharani Dhar Burra ; Laith Ibrahim Moushib ; Pete E. Hedley ; Erland Liljeroth ; Dan Jacobson ; Erik Alexandersson [Suède] ; Erik Andreasson | Proteomics and transcriptomics of the BABA-induced resistance response in potato using a novel functional annotation approach. |
| 001052 (2014) |
Feng Lin ; Meixia Zhao ; Douglas D. Baumann ; Jieqing Ping ; Lianjun Sun ; Yunfeng Liu ; Biao Zhang ; Zongxiang Tang ; Elisa Hughes ; Rebecca W. Doerge ; Teresa J. Hughes [États-Unis] ; Jianxin Ma | Molecular response to the pathogen Phytophthora sojae among ten soybean near isogenic lines revealed by comparative transcriptomics. |
| 001150 (2014) |
Leila M. Blackman [Australie] ; Darren P. Cullerne ; Adrienne R. Hardham | Bioinformatic characterisation of genes encoding cell wall degrading enzymes in the Phytophthora parasitica genome. |
| 001252 (2013) |
Wenwu Ye ; Yang Wang ; Suomeng Dong ; Brett M. Tyler ; Yuanchao Wang [République populaire de Chine] | Phylogenetic and transcriptional analysis of an expanded bZIP transcription factor family in Phytophthora sojae. |
| 001263 (2013) |
Sourav Roy [États-Unis] ; Laetitia Poidevin ; Tao Jiang ; Howard S. Judelson | Novel core promoter elements in the oomycete pathogen Phytophthora infestans and their influence on expression detected by genome-wide analysis. |
| 001281 (2013) |
Liangliang Gao [États-Unis] ; Zheng Jin Tu ; Benjamin P. Millett ; James M. Bradeen | Insights into organ-specific pathogen defense responses in plants: RNA-seq analysis of potato tuber-Phytophthora infestans interactions. |
| 001299 (2013) |
Nunzio D'Agostino [Pays-Bas] ; Tomek Golas ; Henri Van De Geest ; Aureliano Bombarely ; Thikra Dawood ; Jan Zethof ; Nicky Driedonks ; Erik Wijnker ; Joachim Bargsten ; Jan-Peter Nap ; Celestina Mariani ; Ivo Rieu | Genomic analysis of the native European Solanum species, S. dulcamara. |
| 001391 (2013) |
Michael F. Seidl [Pays-Bas] ; Adrian Schneider ; Francine Govers ; Berend Snel | A predicted functional gene network for the plant pathogen Phytophthora infestans as a framework for genomic biology. |
| 001418 (2012) |
Mathieu Larroque [France] ; Roland Barriot ; Arnaud Bottin ; Annick Barre ; Pierre Rougé ; Bernard Dumas ; Elodie Gaulin | The unique architecture and function of cellulose-interacting proteins in oomycetes revealed by genomic and structural analyses. |
| 001479 (2012) |
Sucheta Tripathy [États-Unis] ; Tejal Deo ; Brett M. Tyler | Oomycete Transcriptomics Database: a resource for oomycete transcriptomes. |
| 001553 (2012) |
Hehe Wang [États-Unis] ; Asela Wijeratne ; Saranga Wijeratne ; Sungwoo Lee ; Christopher G. Taylor ; Steven K. St Martin ; Leah Mchale ; Anne E. Dorrance | Dissection of two soybean QTL conferring partial resistance to Phytophthora sojae through sequence and gene expression analysis. |
| 001646 (2011) |
John Kay [Royaume-Uni] ; Harold J G. Meijer ; Arjen Ten Have ; Jan A L. Van Kan | The aspartic proteinase family of three Phytophthora species. |
| 001721 (2011) |
Leonardo P. Boava [Brésil] ; Mariângela Cristofani-Yaly ; Valéria S. Mafra ; Karen Kubo ; Luciano T. Kishi ; Marco A. Takita ; Marcelo Ribeiro-Alves ; Marcos A. Machado | Global gene expression of Poncirus trifoliata, Citrus sunki and their hybrids under infection of Phytophthora parasitica. |
| 001818 (2010) |
Howard S. Judelson [États-Unis] ; Audrey M V. Ah-Fong | The kinome of Phytophthora infestans reveals oomycete-specific innovations and links to other taxonomic groups. |
| 001820 (2010) |
Cindy Martens [Belgique] ; Yves Van De Peer | The hidden duplication past of the plant pathogen Phytophthora and its consequences for infection. |
| 001823 (2010) |
Manuel D. Ospina-Giraldo [États-Unis] ; John G. Griffith ; Emma W. Laird ; Christina Mingora | The CAZyome of Phytophthora spp.: a comprehensive analysis of the gene complement coding for carbohydrate-active enzymes in species of the genus Phytophthora. |
| 001982 (2010) |
Sylvain Raffaele [Royaume-Uni] ; Joe Win ; Liliana M. Cano ; Sophien Kamoun | Analyses of genome architecture and gene expression reveal novel candidate virulence factors in the secretome of Phytophthora infestans. |
| 001A86 (2009) |
Lecong Zhou [États-Unis] ; Santiago X. Mideros ; Lei Bao ; Regina Hanlon ; Felipe D. Arredondo ; Sucheta Tripathy ; Konstantinos Krampis ; Adam Jerauld ; Clive Evans ; Steven K. St Martin ; M A Saghai Maroof ; Ina Hoeschele ; Anne E. Dorrance ; Brett M. Tyler | Infection and genotype remodel the entire soybean transcriptome. |
| 001B64 (2009) |
John W. Stiller [États-Unis] ; Jinling Huang ; Qin Ding ; Jing Tian ; Carol Goodwillie | Are algal genes in nonphotosynthetic protists evidence of historical plastid endosymbioses? |
| 001B94 (2008) |
Marianna Polesani [Italie] ; Filomena Desario ; Alberto Ferrarini ; Anita Zamboni ; Mario Pezzotti ; Andreas Kortekamp ; Annalisa Polverari | cDNA-AFLP analysis of plant and pathogen genes expressed in grapevine infected with Plasmopara viticola. |
| 001C00 (2008) |
Leonardo Schena [Italie] ; Linda Cardle ; David E L. Cooke | Use of genome sequence data in the design and testing of SSR markers for Phytophthora species. |
| 001D46 (2008) |
Foo Cheung [États-Unis] ; Joe Win ; Jillian M. Lang ; John Hamilton ; Hue Vuong ; Jan E. Leach ; Sophien Kamoun ; C. André Lévesque ; Ned Tisserat ; C Robin Buell | Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches. |
| 001E99 (2007) |
Agim Ballvora [Allemagne] ; Anika Jöcker ; Prisca Viehöver ; Hirofumi Ishihara ; Jürgen Paal ; Khalid Meksem ; Rémy Bruggmann ; Heiko Schoof ; Bernd Weisshaar ; Christiane Gebhardt | Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments. |
| 001F34 (2007) |
Intikhab Alam [Royaume-Uni] ; Simon J. Hubbard ; Stephen G. Oliver ; Magnus Rattray | A kingdom-specific protein domain HMM library for improved annotation of fungal genomes. |
| 001F65 (2006) |
Diana P. Garnica [Colombie] ; Andrés M. Pinz N ; Lina M. Quesada-Ocampo ; Adriana J. Bernal ; Emiliano Barreto ; Niklaus J. Grünwald ; Silvia Restrepo | Survey and analysis of microsatellites from transcript sequences in Phytophthora species: frequency, distribution, and potential as markers for the genus. |
