Transcriptional programming and functional interactions within the Phytophthora sojae RXLR effector repertoire.
Identifieur interne : 001690 ( Main/Corpus ); précédent : 001689; suivant : 001691Transcriptional programming and functional interactions within the Phytophthora sojae RXLR effector repertoire.
Auteurs : Qunqing Wang ; Changzhi Han ; Adriana O. Ferreira ; Xiaoli Yu ; Wenwu Ye ; Sucheta Tripathy ; Shiv D. Kale ; Biao Gu ; Yuting Sheng ; Yangyang Sui ; Xiaoli Wang ; Zhengguang Zhang ; Baoping Cheng ; Suomeng Dong ; Weixing Shan ; Xiaobo Zheng ; Daolong Dou ; Brett M. Tyler ; Yuanchao WangSource :
- The Plant cell [ 1532-298X ] ; 2011.
English descriptors
- KwdEn :
- Agrobacterium tumefaciens (genetics), Agrobacterium tumefaciens (metabolism), Amino Acid Sequence (MeSH), Animals (MeSH), Cell Death (physiology), Gene Expression Regulation (MeSH), Microarray Analysis (MeSH), Molecular Sequence Data (MeSH), Phytophthora (genetics), Phytophthora (metabolism), Phytophthora (pathogenicity), Plant Proteins (genetics), Plant Proteins (metabolism), Polymorphism, Genetic (MeSH), Sequence Alignment (MeSH), Soybeans (genetics), Soybeans (immunology), Soybeans (microbiology), Tobacco (genetics), Tobacco (immunology), Tobacco (microbiology), Transcription, Genetic (MeSH), bcl-2-Associated X Protein (genetics), bcl-2-Associated X Protein (metabolism).
- MESH :
- chemical , genetics : Plant Proteins, bcl-2-Associated X Protein.
- genetics : Agrobacterium tumefaciens, Phytophthora, Soybeans, Tobacco.
- immunology : Soybeans, Tobacco.
- metabolism : Agrobacterium tumefaciens, Phytophthora, Plant Proteins, bcl-2-Associated X Protein.
- microbiology : Soybeans, Tobacco.
- pathogenicity : Phytophthora.
- physiology : Cell Death.
- Amino Acid Sequence, Animals, Gene Expression Regulation, Microarray Analysis, Molecular Sequence Data, Polymorphism, Genetic, Sequence Alignment, Transcription, Genetic.
Abstract
The genome of the soybean pathogen Phytophthora sojae contains nearly 400 genes encoding candidate effector proteins carrying the host cell entry motif RXLR-dEER. Here, we report a broad survey of the transcription, variation, and functions of a large sample of the P. sojae candidate effectors. Forty-five (12%) effector genes showed high levels of polymorphism among P. sojae isolates and significant evidence for positive selection. Of 169 effectors tested, most could suppress programmed cell death triggered by BAX, effectors, and/or the PAMP INF1, while several triggered cell death themselves. Among the most strongly expressed effectors, one immediate-early class was highly expressed even prior to infection and was further induced 2- to 10-fold following infection. A second early class, including several that triggered cell death, was weakly expressed prior to infection but induced 20- to 120-fold during the first 12 h of infection. The most strongly expressed immediate-early effectors could suppress the cell death triggered by several early effectors, and most early effectors could suppress INF1-triggered cell death, suggesting the two classes of effectors may target different functional branches of the defense response. In support of this hypothesis, misexpression of key immediate-early and early effectors severely reduced the virulence of P. sojae transformants.
DOI: 10.1105/tpc.111.086082
PubMed: 21653195
PubMed Central: PMC3160037
Links to Exploration step
pubmed:21653195Le document en format XML
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Tyler</name></author><author><name sortKey="Wang, Yuanchao" sort="Wang, Yuanchao" uniqKey="Wang Y" first="Yuanchao" last="Wang">Yuanchao Wang</name></author></analytic><series><title level="j">The Plant cell</title><idno type="eISSN">1532-298X</idno><imprint><date when="2011" type="published">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Agrobacterium tumefaciens (genetics)</term><term>Agrobacterium tumefaciens (metabolism)</term><term>Amino Acid Sequence (MeSH)</term><term>Animals (MeSH)</term><term>Cell Death (physiology)</term><term>Gene Expression Regulation (MeSH)</term><term>Microarray Analysis (MeSH)</term><term>Molecular Sequence Data (MeSH)</term><term>Phytophthora (genetics)</term><term>Phytophthora (metabolism)</term><term>Phytophthora (pathogenicity)</term><term>Plant Proteins (genetics)</term><term>Plant Proteins (metabolism)</term><term>Polymorphism, Genetic (MeSH)</term><term>Sequence Alignment (MeSH)</term><term>Soybeans (genetics)</term><term>Soybeans (immunology)</term><term>Soybeans (microbiology)</term><term>Tobacco (genetics)</term><term>Tobacco (immunology)</term><term>Tobacco (microbiology)</term><term>Transcription, Genetic (MeSH)</term><term>bcl-2-Associated X Protein (genetics)</term><term>bcl-2-Associated X Protein (metabolism)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Plant Proteins</term><term>bcl-2-Associated X Protein</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Agrobacterium tumefaciens</term><term>Phytophthora</term><term>Soybeans</term><term>Tobacco</term></keywords><keywords scheme="MESH" qualifier="immunology" xml:lang="en"><term>Soybeans</term><term>Tobacco</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Agrobacterium tumefaciens</term><term>Phytophthora</term><term>Plant Proteins</term><term>bcl-2-Associated X Protein</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Soybeans</term><term>Tobacco</term></keywords><keywords scheme="MESH" qualifier="pathogenicity" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Cell Death</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term><term>Animals</term><term>Gene Expression Regulation</term><term>Microarray Analysis</term><term>Molecular Sequence Data</term><term>Polymorphism, Genetic</term><term>Sequence Alignment</term><term>Transcription, Genetic</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The genome of the soybean pathogen Phytophthora sojae contains nearly 400 genes encoding candidate effector proteins carrying the host cell entry motif RXLR-dEER. Here, we report a broad survey of the transcription, variation, and functions of a large sample of the P. sojae candidate effectors. Forty-five (12%) effector genes showed high levels of polymorphism among P. sojae isolates and significant evidence for positive selection. Of 169 effectors tested, most could suppress programmed cell death triggered by BAX, effectors, and/or the PAMP INF1, while several triggered cell death themselves. Among the most strongly expressed effectors, one immediate-early class was highly expressed even prior to infection and was further induced 2- to 10-fold following infection. A second early class, including several that triggered cell death, was weakly expressed prior to infection but induced 20- to 120-fold during the first 12 h of infection. The most strongly expressed immediate-early effectors could suppress the cell death triggered by several early effectors, and most early effectors could suppress INF1-triggered cell death, suggesting the two classes of effectors may target different functional branches of the defense response. In support of this hypothesis, misexpression of key immediate-early and early effectors severely reduced the virulence of P. sojae transformants.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">21653195</PMID><DateCompleted><Year>2012</Year><Month>03</Month><Day>08</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1532-298X</ISSN><JournalIssue CitedMedium="Internet"><Volume>23</Volume><Issue>6</Issue><PubDate><Year>2011</Year><Month>Jun</Month></PubDate></JournalIssue><Title>The Plant cell</Title><ISOAbbreviation>Plant Cell</ISOAbbreviation></Journal><ArticleTitle>Transcriptional programming and functional interactions within the Phytophthora sojae RXLR effector repertoire.</ArticleTitle><Pagination><MedlinePgn>2064-86</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1105/tpc.111.086082</ELocationID><Abstract><AbstractText>The genome of the soybean pathogen Phytophthora sojae contains nearly 400 genes encoding candidate effector proteins carrying the host cell entry motif RXLR-dEER. Here, we report a broad survey of the transcription, variation, and functions of a large sample of the P. sojae candidate effectors. Forty-five (12%) effector genes showed high levels of polymorphism among P. sojae isolates and significant evidence for positive selection. Of 169 effectors tested, most could suppress programmed cell death triggered by BAX, effectors, and/or the PAMP INF1, while several triggered cell death themselves. Among the most strongly expressed effectors, one immediate-early class was highly expressed even prior to infection and was further induced 2- to 10-fold following infection. A second early class, including several that triggered cell death, was weakly expressed prior to infection but induced 20- to 120-fold during the first 12 h of infection. The most strongly expressed immediate-early effectors could suppress the cell death triggered by several early effectors, and most early effectors could suppress INF1-triggered cell death, suggesting the two classes of effectors may target different functional branches of the defense response. In support of this hypothesis, misexpression of key immediate-early and early effectors severely reduced the virulence of P. sojae transformants.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Qunqing</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, Nanjing Agricultural University, Nanjing 210095, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Han</LastName><ForeName>Changzhi</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Ferreira</LastName><ForeName>Adriana O</ForeName><Initials>AO</Initials></Author><Author ValidYN="Y"><LastName>Yu</LastName><ForeName>Xiaoli</ForeName><Initials>X</Initials></Author><Author ValidYN="Y"><LastName>Ye</LastName><ForeName>Wenwu</ForeName><Initials>W</Initials></Author><Author ValidYN="Y"><LastName>Tripathy</LastName><ForeName>Sucheta</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Kale</LastName><ForeName>Shiv D</ForeName><Initials>SD</Initials></Author><Author ValidYN="Y"><LastName>Gu</LastName><ForeName>Biao</ForeName><Initials>B</Initials></Author><Author ValidYN="Y"><LastName>Sheng</LastName><ForeName>Yuting</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Sui</LastName><ForeName>Yangyang</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Xiaoli</ForeName><Initials>X</Initials></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Zhengguang</ForeName><Initials>Z</Initials></Author><Author ValidYN="Y"><LastName>Cheng</LastName><ForeName>Baoping</ForeName><Initials>B</Initials></Author><Author ValidYN="Y"><LastName>Dong</LastName><ForeName>Suomeng</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Shan</LastName><ForeName>Weixing</ForeName><Initials>W</Initials></Author><Author ValidYN="Y"><LastName>Zheng</LastName><ForeName>Xiaobo</ForeName><Initials>X</Initials></Author><Author ValidYN="Y"><LastName>Dou</LastName><ForeName>Daolong</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Tyler</LastName><ForeName>Brett M</ForeName><Initials>BM</Initials></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Yuanchao</ForeName><Initials>Y</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2011</Year><Month>06</Month><Day>07</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Plant Cell</MedlineTA><NlmUniqueID>9208688</NlmUniqueID><ISSNLinking>1040-4651</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D051028">bcl-2-Associated X Protein</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D016960" MajorTopicYN="N">Agrobacterium tumefaciens</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000595" MajorTopicYN="N">Amino Acid Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016923" MajorTopicYN="N">Cell Death</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005786" MajorTopicYN="N">Gene Expression Regulation</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D046228" MajorTopicYN="N">Microarray Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010838" MajorTopicYN="N">Phytophthora</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName><QualifierName UI="Q000472" MajorTopicYN="Y">pathogenicity</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011110" MajorTopicYN="N">Polymorphism, Genetic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016415" MajorTopicYN="N">Sequence Alignment</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013025" MajorTopicYN="N">Soybeans</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000276" MajorTopicYN="N">immunology</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014026" MajorTopicYN="N">Tobacco</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000276" MajorTopicYN="N">immunology</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014158" MajorTopicYN="Y">Transcription, Genetic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D051028" MajorTopicYN="N">bcl-2-Associated X 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