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Draft Genome Sequence of a Biocontrol Rhizobacterium, Chryseobacterium kwangjuense Strain KJ1R5, Isolated from Pepper (Capsicum annuum).

Identifieur interne : 000C20 ( Main/Corpus ); précédent : 000C19; suivant : 000C21

Draft Genome Sequence of a Biocontrol Rhizobacterium, Chryseobacterium kwangjuense Strain KJ1R5, Isolated from Pepper (Capsicum annuum).

Auteurs : Jin-Ju Jeong ; Hongjae Park ; Byeong Hyeok Park ; Mohamed Mannaa ; Mee Kyung Sang ; In-Geol Choi ; Ki Deok Kim

Source :

RBID : pubmed:27103726

Abstract

Strain KJ1R5 of the rhizobacterium ITALIC! Chryseobacterium kwangjuenseis an effective biocontrol agent against Phytophthora blight of pepper caused by a destructive soilborne oomycete, ITALIC! Phytophthora capsici Here, we present the draft genome sequence of strain KJ1R5, which contains genes related to biocontrol, plant growth promotion, and environmental stress adaptation.

DOI: 10.1128/genomeA.00301-16
PubMed: 27103726
PubMed Central: PMC4841141

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pubmed:27103726

Le document en format XML

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<ArticleIdList>
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</ArticleIdList>
</Reference>
<Reference>
<Citation>J Appl Microbiol. 2012 Aug;113(2):383-98</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">22563881</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Int J Syst Evol Microbiol. 2013 Aug;63(Pt 8):2835-40</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">23315413</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Chemosphere. 2013 Jan;90(2):479-87</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">22963878</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Phytopathology. 2014 Aug;104(8):834-42</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">24502209</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant Physiol. 2008 Feb;146(2):657-68</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">18055583</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>J Comput Biol. 2012 May;19(5):455-77</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">22506599</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Annu Rev Microbiol. 2009;63:541-56</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">19575558</ArticleId>
</ArticleIdList>
</Reference>
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