PhanerochaeteV1, Main, Exploration, bibRecord, 000F08

Molecular analysis of a Bjerkandera adusta lignin peroxidase gene.

Identifieur interne : 000F08 ( Main/Exploration ); précédent : 000F07; suivant : 000F09

Molecular analysis of a Bjerkandera adusta lignin peroxidase gene.

Auteurs : Y. Kimura [Japon] ; Y. Asada ; T. Oka ; M. Kuwahara

Source :

Applied microbiology and biotechnology [ 0175-7598 ] ; 1991.

RBID : pubmed:1367394

Descripteurs français

KwdFr :
- ADN fongique (composition chimique), Banque génomique (MeSH), Basidiomycota (enzymologie), Basidiomycota (génétique), Boite TATA (MeSH), Cartographie de restriction (MeSH), Données de séquences moléculaires (MeSH), Gènes fongiques (MeSH), Peroxidases (génétique), Séquence d'acides aminés (MeSH), Séquence nucléotidique (MeSH).
MESH :
- composition chimique : ADN fongique.
- enzymologie : Basidiomycota.
- génétique : Basidiomycota, Peroxidases.
- Banque génomique, Boite TATA, Cartographie de restriction, Données de séquences moléculaires, Gènes fongiques, Séquence d'acides aminés, Séquence nucléotidique.

English descriptors

KwdEn :
- Amino Acid Sequence (MeSH), Base Sequence (MeSH), Basidiomycota (enzymology), Basidiomycota (genetics), DNA, Fungal (chemistry), Genes, Fungal (MeSH), Genomic Library (MeSH), Molecular Sequence Data (MeSH), Peroxidases (genetics), Restriction Mapping (MeSH), TATA Box (MeSH).
MESH :
- chemical , chemistry : DNA, Fungal.
- enzymology : Basidiomycota.
- genetics : Basidiomycota, Peroxidases.
- Amino Acid Sequence, Base Sequence, Genes, Fungal, Genomic Library, Molecular Sequence Data, Restriction Mapping, TATA Box.

Abstract

A cDNA clone, lambda LPO-1, encoding a major lignin peroxidase from the basidiomycete Bjerkandera adusta was isolated and characterized. The nucleotide sequence of lambda LPO-1 predicts a mature protein consisting of 349 amino acids with a molecular weight of 37,225 preceded by a signal peptide of 23 amino acid residues. We have also cloned and sequenced the gene encoding lignin peroxidase from B. adusta. Comparison of these sequences reveals a lignin peroxidase gene structure consisting of 1,116 bp of protein-encoding DNA that is interrupted by four intervening sequences. The putative eukaryotic regulatory sequence, a TATA box, is present at position -75 relative to the translational initiation codon. Amino acid sequence homology between the coding regions of lambda LPO-1 and of the lignin peroxidase cDNA clone lambda ML-1 from Phanerochaete chrysosporium is 61%.

DOI: 10.1007/BF00169758
PubMed: 1367394

Affiliations:

Japon

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000F18
to stream Main, to step Curation: 000F18

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Molecular analysis of a Bjerkandera adusta lignin peroxidase gene.</title>
<author><name sortKey="Kimura, Y" sort="Kimura, Y" uniqKey="Kimura Y" first="Y" last="Kimura">Y. Kimura</name>
<affiliation wicri:level="1"><nlm:affiliation>Department of Bioresource Science, Faculty of Agriculture, Kagawa University, Japan.</nlm:affiliation>
<country xml:lang="fr">Japon</country>
<wicri:regionArea>Department of Bioresource Science, Faculty of Agriculture, Kagawa University</wicri:regionArea>
<wicri:noRegion>Kagawa University</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Asada, Y" sort="Asada, Y" uniqKey="Asada Y" first="Y" last="Asada">Y. Asada</name>
</author>
<author><name sortKey="Oka, T" sort="Oka, T" uniqKey="Oka T" first="T" last="Oka">T. Oka</name>
</author>
<author><name sortKey="Kuwahara, M" sort="Kuwahara, M" uniqKey="Kuwahara M" first="M" last="Kuwahara">M. Kuwahara</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="1991">1991</date>
<idno type="RBID">pubmed:1367394</idno>
<idno type="pmid">1367394</idno>
<idno type="doi">10.1007/BF00169758</idno>
<idno type="wicri:Area/Main/Corpus">000F18</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000F18</idno>
<idno type="wicri:Area/Main/Curation">000F18</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000F18</idno>
<idno type="wicri:Area/Main/Exploration">000F18</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Molecular analysis of a Bjerkandera adusta lignin peroxidase gene.</title>
<author><name sortKey="Kimura, Y" sort="Kimura, Y" uniqKey="Kimura Y" first="Y" last="Kimura">Y. Kimura</name>
<affiliation wicri:level="1"><nlm:affiliation>Department of Bioresource Science, Faculty of Agriculture, Kagawa University, Japan.</nlm:affiliation>
<country xml:lang="fr">Japon</country>
<wicri:regionArea>Department of Bioresource Science, Faculty of Agriculture, Kagawa University</wicri:regionArea>
<wicri:noRegion>Kagawa University</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Asada, Y" sort="Asada, Y" uniqKey="Asada Y" first="Y" last="Asada">Y. Asada</name>
</author>
<author><name sortKey="Oka, T" sort="Oka, T" uniqKey="Oka T" first="T" last="Oka">T. Oka</name>
</author>
<author><name sortKey="Kuwahara, M" sort="Kuwahara, M" uniqKey="Kuwahara M" first="M" last="Kuwahara">M. Kuwahara</name>
</author>
</analytic>
<series><title level="j">Applied microbiology and biotechnology</title>
<idno type="ISSN">0175-7598</idno>
<imprint><date when="1991" type="published">1991</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acid Sequence (MeSH)</term>
<term>Base Sequence (MeSH)</term>
<term>Basidiomycota (enzymology)</term>
<term>Basidiomycota (genetics)</term>
<term>DNA, Fungal (chemistry)</term>
<term>Genes, Fungal (MeSH)</term>
<term>Genomic Library (MeSH)</term>
<term>Molecular Sequence Data (MeSH)</term>
<term>Peroxidases (genetics)</term>
<term>Restriction Mapping (MeSH)</term>
<term>TATA Box (MeSH)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ADN fongique (composition chimique)</term>
<term>Banque génomique (MeSH)</term>
<term>Basidiomycota (enzymologie)</term>
<term>Basidiomycota (génétique)</term>
<term>Boite TATA (MeSH)</term>
<term>Cartographie de restriction (MeSH)</term>
<term>Données de séquences moléculaires (MeSH)</term>
<term>Gènes fongiques (MeSH)</term>
<term>Peroxidases (génétique)</term>
<term>Séquence d'acides aminés (MeSH)</term>
<term>Séquence nucléotidique (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>DNA, Fungal</term>
</keywords>
<keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>ADN fongique</term>
</keywords>
<keywords scheme="MESH" qualifier="enzymologie" xml:lang="fr"><term>Basidiomycota</term>
</keywords>
<keywords scheme="MESH" qualifier="enzymology" xml:lang="en"><term>Basidiomycota</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Basidiomycota</term>
<term>Peroxidases</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Basidiomycota</term>
<term>Peroxidases</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term>
<term>Base Sequence</term>
<term>Genes, Fungal</term>
<term>Genomic Library</term>
<term>Molecular Sequence Data</term>
<term>Restriction Mapping</term>
<term>TATA Box</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Banque génomique</term>
<term>Boite TATA</term>
<term>Cartographie de restriction</term>
<term>Données de séquences moléculaires</term>
<term>Gènes fongiques</term>
<term>Séquence d'acides aminés</term>
<term>Séquence nucléotidique</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">A cDNA clone, lambda LPO-1, encoding a major lignin peroxidase from the basidiomycete Bjerkandera adusta was isolated and characterized. The nucleotide sequence of lambda LPO-1 predicts a mature protein consisting of 349 amino acids with a molecular weight of 37,225 preceded by a signal peptide of 23 amino acid residues. We have also cloned and sequenced the gene encoding lignin peroxidase from B. adusta. Comparison of these sequences reveals a lignin peroxidase gene structure consisting of 1,116 bp of protein-encoding DNA that is interrupted by four intervening sequences. The putative eukaryotic regulatory sequence, a TATA box, is present at position -75 relative to the translational initiation codon. Amino acid sequence homology between the coding regions of lambda LPO-1 and of the lignin peroxidase cDNA clone lambda ML-1 from Phanerochaete chrysosporium is 61%.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">1367394</PMID>
<DateCompleted><Year>1991</Year>
<Month>10</Month>
<Day>16</Day>
</DateCompleted>
<DateRevised><Year>2019</Year>
<Month>09</Month>
<Day>11</Day>
</DateRevised>
<Article PubModel="Print"><Journal><ISSN IssnType="Print">0175-7598</ISSN>
<JournalIssue CitedMedium="Print"><Volume>35</Volume>
<Issue>4</Issue>
<PubDate><Year>1991</Year>
<Month>Jul</Month>
</PubDate>
</JournalIssue>
<Title>Applied microbiology and biotechnology</Title>
<ISOAbbreviation>Appl Microbiol Biotechnol</ISOAbbreviation>
</Journal>
<ArticleTitle>Molecular analysis of a Bjerkandera adusta lignin peroxidase gene.</ArticleTitle>
<Pagination><MedlinePgn>510-4</MedlinePgn>
</Pagination>
<Abstract><AbstractText>A cDNA clone, lambda LPO-1, encoding a major lignin peroxidase from the basidiomycete Bjerkandera adusta was isolated and characterized. The nucleotide sequence of lambda LPO-1 predicts a mature protein consisting of 349 amino acids with a molecular weight of 37,225 preceded by a signal peptide of 23 amino acid residues. We have also cloned and sequenced the gene encoding lignin peroxidase from B. adusta. Comparison of these sequences reveals a lignin peroxidase gene structure consisting of 1,116 bp of protein-encoding DNA that is interrupted by four intervening sequences. The putative eukaryotic regulatory sequence, a TATA box, is present at position -75 relative to the translational initiation codon. Amino acid sequence homology between the coding regions of lambda LPO-1 and of the lignin peroxidase cDNA clone lambda ML-1 from Phanerochaete chrysosporium is 61%.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Kimura</LastName>
<ForeName>Y</ForeName>
<Initials>Y</Initials>
<AffiliationInfo><Affiliation>Department of Bioresource Science, Faculty of Agriculture, Kagawa University, Japan.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Asada</LastName>
<ForeName>Y</ForeName>
<Initials>Y</Initials>
</Author>
<Author ValidYN="Y"><LastName>Oka</LastName>
<ForeName>T</ForeName>
<Initials>T</Initials>
</Author>
<Author ValidYN="Y"><LastName>Kuwahara</LastName>
<ForeName>M</ForeName>
<Initials>M</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D003160">Comparative Study</PublicationType>
<PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
</Article>
<MedlineJournalInfo><Country>Germany</Country>
<MedlineTA>Appl Microbiol Biotechnol</MedlineTA>
<NlmUniqueID>8406612</NlmUniqueID>
<ISSNLinking>0175-7598</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D004271">DNA, Fungal</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>EC 1.11.1.-</RegistryNumber>
<NameOfSubstance UI="D010544">Peroxidases</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>EC 1.11.1.-</RegistryNumber>
<NameOfSubstance UI="C042858">lignin peroxidase</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>B</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D000595" MajorTopicYN="N">Amino Acid Sequence</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D001483" MajorTopicYN="N">Base Sequence</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D001487" MajorTopicYN="N">Basidiomycota</DescriptorName>
<QualifierName UI="Q000201" MajorTopicYN="N">enzymology</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D004271" MajorTopicYN="N">DNA, Fungal</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D005800" MajorTopicYN="Y">Genes, Fungal</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D015698" MajorTopicYN="N">Genomic Library</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010544" MajorTopicYN="N">Peroxidases</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D015183" MajorTopicYN="N">Restriction Mapping</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016385" MajorTopicYN="N">TATA Box</DescriptorName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>1991</Year>
<Month>7</Month>
<Day>1</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>1991</Year>
<Month>7</Month>
<Day>1</Day>
<Hour>0</Hour>
<Minute>1</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>1991</Year>
<Month>7</Month>
<Day>1</Day>
<Hour>0</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">1367394</ArticleId>
<ArticleId IdType="doi">10.1007/BF00169758</ArticleId>
</ArticleIdList>
<ReferenceList><Reference><Citation>Biochem J. 1988 Sep 15;254(3):877-83</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3196301</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 1984 Mar;81(5):1470-4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">6324193</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Yeast. 1986 Dec;2(4):229-36</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3333455</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 1987 Apr 2-8;326(6112):520-3</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3561490</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Gene. 1988 Dec 15;73(1):77-85</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2907500</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Yeast. 1988 Mar;4(1):17-26</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3059710</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 1983 Jun;33(2):519-27</Citation>
<ArticleIdList><ArticleId IdType="pubmed">6305513</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 1988 Feb 11;16(3):1219</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3344218</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 1984 Apr;81(8):2280-4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16593451</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 1986 Feb 11;14(3):1319-24</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3951988</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Gene. 1987;60(1):93-102</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3440521</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Microbiol Biotechnol. 1990 Jan;32(4):436-42</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1366392</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Arch Biochem Biophys. 1984 Nov 1;234(2):353-62</Citation>
<ArticleIdList><ArticleId IdType="pubmed">6497376</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Biochem Biophys Res Commun. 1989 Jul 31;162(2):673-80</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2474293</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEBS Lett. 1989 Apr 10;247(1):143-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2707445</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Biochem J. 1986 May 15;236(1):279-87</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3024619</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
<affiliations><list><country><li>Japon</li>
</country>
</list>
<tree><noCountry><name sortKey="Asada, Y" sort="Asada, Y" uniqKey="Asada Y" first="Y" last="Asada">Y. Asada</name>
<name sortKey="Kuwahara, M" sort="Kuwahara, M" uniqKey="Kuwahara M" first="M" last="Kuwahara">M. Kuwahara</name>
<name sortKey="Oka, T" sort="Oka, T" uniqKey="Oka T" first="T" last="Oka">T. Oka</name>
</noCountry>
<country name="Japon"><noRegion><name sortKey="Kimura, Y" sort="Kimura, Y" uniqKey="Kimura Y" first="Y" last="Kimura">Y. Kimura</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PhanerochaeteV1/Data/Main/Exploration

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000F08 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000F08 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    PhanerochaeteV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:1367394
   |texte=   Molecular analysis of a Bjerkandera adusta lignin peroxidase gene.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:1367394" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a PhanerochaeteV1

This area was generated with Dilib version V0.6.37.
Data generation: Fri Nov 13 18:33:39 2020. Site generation: Fri Nov 13 18:35:20 2020

	Serveur d'exploration sur le phanerochaete
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration sur le phanerochaete

Molecular analysis of a Bjerkandera adusta lignin peroxidase gene.

Molecular analysis of a Bjerkandera adusta lignin peroxidase gene.

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki