Expression and regulation of genes encoding lignocellulose-degrading activity in the genus Phanerochaete.
Identifieur interne : 000445 ( Main/Corpus ); précédent : 000444; suivant : 000446Expression and regulation of genes encoding lignocellulose-degrading activity in the genus Phanerochaete.
Auteurs : Jacqueline Macdonald ; Hitoshi Suzuki ; Emma R. MasterSource :
- Applied microbiology and biotechnology [ 1432-0614 ] ; 2012.
English descriptors
- KwdEn :
- MESH :
- chemical , metabolism : Lignin.
- genetics : Metabolic Networks and Pathways, Phanerochaete.
- metabolism : Phanerochaete.
- Gene Expression Regulation, Enzymologic, Gene Expression Regulation, Fungal.
Abstract
As white-rot basidiomycetes, Phanerochaete species are critical to the cycling of carbon sequestered as woody biomass, and are predicted to encode many enzymes that can be harnessed to promote the conversion of lignocellulose to sugars for fermentation to fuels and chemicals. Advances in genomic, transcriptomic, and proteomic technologies have enabled detailed analyses of different Phanerochaete species and have revealed numerous enzyme families required for lignocellulose utilization, as well as insight into the regulation of corresponding genes. Recent studies of Phanerochaete are also exemplified by molecular analyses following cultivation on different wood preparations, and show substrate-dependent responses that were difficult to predict using model compounds or isolated plant polysaccharides. The aim of this mini-review is to synthesize results from studies that have applied recent advances in molecular tools to evaluate the expression and regulation of proteins that contribute to lignocellulose conversion in Phanerochaete species. The identification of proteins with as yet unknown function are also highlighted and noted as important targets for future investigation of white-rot decay.
DOI: 10.1007/s00253-012-3937-z
PubMed: 22391967
Links to Exploration step
pubmed:22391967Le document en format XML
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<author><name sortKey="Macdonald, Jacqueline" sort="Macdonald, Jacqueline" uniqKey="Macdonald J" first="Jacqueline" last="Macdonald">Jacqueline Macdonald</name>
<affiliation><nlm:affiliation>Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Ontario, Canada.</nlm:affiliation>
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<author><name sortKey="Suzuki, Hitoshi" sort="Suzuki, Hitoshi" uniqKey="Suzuki H" first="Hitoshi" last="Suzuki">Hitoshi Suzuki</name>
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<author><name sortKey="Master, Emma R" sort="Master, Emma R" uniqKey="Master E" first="Emma R" last="Master">Emma R. Master</name>
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<author><name sortKey="Suzuki, Hitoshi" sort="Suzuki, Hitoshi" uniqKey="Suzuki H" first="Hitoshi" last="Suzuki">Hitoshi Suzuki</name>
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<author><name sortKey="Master, Emma R" sort="Master, Emma R" uniqKey="Master E" first="Emma R" last="Master">Emma R. Master</name>
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<series><title level="j">Applied microbiology and biotechnology</title>
<idno type="eISSN">1432-0614</idno>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Gene Expression Regulation, Enzymologic (MeSH)</term>
<term>Gene Expression Regulation, Fungal (MeSH)</term>
<term>Lignin (metabolism)</term>
<term>Metabolic Networks and Pathways (genetics)</term>
<term>Phanerochaete (genetics)</term>
<term>Phanerochaete (metabolism)</term>
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<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Lignin</term>
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<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Metabolic Networks and Pathways</term>
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<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Phanerochaete</term>
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<front><div type="abstract" xml:lang="en">As white-rot basidiomycetes, Phanerochaete species are critical to the cycling of carbon sequestered as woody biomass, and are predicted to encode many enzymes that can be harnessed to promote the conversion of lignocellulose to sugars for fermentation to fuels and chemicals. Advances in genomic, transcriptomic, and proteomic technologies have enabled detailed analyses of different Phanerochaete species and have revealed numerous enzyme families required for lignocellulose utilization, as well as insight into the regulation of corresponding genes. Recent studies of Phanerochaete are also exemplified by molecular analyses following cultivation on different wood preparations, and show substrate-dependent responses that were difficult to predict using model compounds or isolated plant polysaccharides. The aim of this mini-review is to synthesize results from studies that have applied recent advances in molecular tools to evaluate the expression and regulation of proteins that contribute to lignocellulose conversion in Phanerochaete species. The identification of proteins with as yet unknown function are also highlighted and noted as important targets for future investigation of white-rot decay.</div>
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<Title>Applied microbiology and biotechnology</Title>
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<Abstract><AbstractText>As white-rot basidiomycetes, Phanerochaete species are critical to the cycling of carbon sequestered as woody biomass, and are predicted to encode many enzymes that can be harnessed to promote the conversion of lignocellulose to sugars for fermentation to fuels and chemicals. Advances in genomic, transcriptomic, and proteomic technologies have enabled detailed analyses of different Phanerochaete species and have revealed numerous enzyme families required for lignocellulose utilization, as well as insight into the regulation of corresponding genes. Recent studies of Phanerochaete are also exemplified by molecular analyses following cultivation on different wood preparations, and show substrate-dependent responses that were difficult to predict using model compounds or isolated plant polysaccharides. The aim of this mini-review is to synthesize results from studies that have applied recent advances in molecular tools to evaluate the expression and regulation of proteins that contribute to lignocellulose conversion in Phanerochaete species. The identification of proteins with as yet unknown function are also highlighted and noted as important targets for future investigation of white-rot decay.</AbstractText>
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