Serveur d'exploration sur l'oranger

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Proteomic analysis of somatic embryogenesis in Valencia sweet orange (Citrus sinensis Osbeck).

Identifieur interne : 000980 ( PubMed/Curation ); précédent : 000979; suivant : 000981

Proteomic analysis of somatic embryogenesis in Valencia sweet orange (Citrus sinensis Osbeck).

Auteurs : Zhiyong Pan [République populaire de Chine] ; Rui Guan ; Shiping Zhu ; Xiuxin Deng

Source :

RBID : pubmed:18989674

English descriptors

Abstract

Two dimensional gel electrophoresis combined with matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) was employed to study the somatic embryogenesis (SE) in Valencia sweet orange (Citrus sinensis Osbeck). Twenty-four differentially expressed proteins were identified at five time points of citrus SE (0, 1, 2, 3, 4 weeks after embryo initiation) covering globular, heart/torpedo and cotyledon-shaped embryo stages. The general expression patterns for these proteins were consistent with those appeared at 4 weeks of citrus SE. The most striking feature of our study was that five proteins were predicted to be involved in glutathione (GSH) metabolism and anti-oxidative stress, and they exhibited different expression patterns during SE. Based on that oxidative stress has been validated to enhance SE, the preferential representation for anti-oxidative proteins suggests that they could have a developmental role in citrus SE. Some proteins involved in cell division, photosynthesis and detoxification were also identified, and their possible roles in citrus SE were discussed.

DOI: 10.1007/s00299-008-0633-7
PubMed: 18989674

Links toward previous steps (curation, corpus...)


Links to Exploration step

pubmed:18989674

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Proteomic analysis of somatic embryogenesis in Valencia sweet orange (Citrus sinensis Osbeck).</title>
<author>
<name sortKey="Pan, Zhiyong" sort="Pan, Zhiyong" uniqKey="Pan Z" first="Zhiyong" last="Pan">Zhiyong Pan</name>
<affiliation wicri:level="1">
<nlm:affiliation>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, People's Republic of China. zypan@webmail.hzau.edu.cn</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Guan, Rui" sort="Guan, Rui" uniqKey="Guan R" first="Rui" last="Guan">Rui Guan</name>
</author>
<author>
<name sortKey="Zhu, Shiping" sort="Zhu, Shiping" uniqKey="Zhu S" first="Shiping" last="Zhu">Shiping Zhu</name>
</author>
<author>
<name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2009">2009</date>
<idno type="RBID">pubmed:18989674</idno>
<idno type="pmid">18989674</idno>
<idno type="doi">10.1007/s00299-008-0633-7</idno>
<idno type="wicri:Area/PubMed/Corpus">000980</idno>
<idno type="wicri:Area/PubMed/Curation">000980</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Proteomic analysis of somatic embryogenesis in Valencia sweet orange (Citrus sinensis Osbeck).</title>
<author>
<name sortKey="Pan, Zhiyong" sort="Pan, Zhiyong" uniqKey="Pan Z" first="Zhiyong" last="Pan">Zhiyong Pan</name>
<affiliation wicri:level="1">
<nlm:affiliation>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, People's Republic of China. zypan@webmail.hzau.edu.cn</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Guan, Rui" sort="Guan, Rui" uniqKey="Guan R" first="Rui" last="Guan">Rui Guan</name>
</author>
<author>
<name sortKey="Zhu, Shiping" sort="Zhu, Shiping" uniqKey="Zhu S" first="Shiping" last="Zhu">Shiping Zhu</name>
</author>
<author>
<name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name>
</author>
</analytic>
<series>
<title level="j">Plant cell reports</title>
<idno type="ISSN">0721-7714</idno>
<imprint>
<date when="2009" type="published">2009</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Citrus sinensis (embryology)</term>
<term>Citrus sinensis (metabolism)</term>
<term>Electrophoresis, Gel, Two-Dimensional</term>
<term>Gene Expression Regulation, Plant</term>
<term>Plant Proteins (metabolism)</term>
<term>Proteomics (methods)</term>
<term>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en">
<term>Plant Proteins</term>
</keywords>
<keywords scheme="MESH" qualifier="embryology" xml:lang="en">
<term>Citrus sinensis</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en">
<term>Citrus sinensis</term>
</keywords>
<keywords scheme="MESH" qualifier="methods" xml:lang="en">
<term>Proteomics</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Electrophoresis, Gel, Two-Dimensional</term>
<term>Gene Expression Regulation, Plant</term>
<term>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Two dimensional gel electrophoresis combined with matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) was employed to study the somatic embryogenesis (SE) in Valencia sweet orange (Citrus sinensis Osbeck). Twenty-four differentially expressed proteins were identified at five time points of citrus SE (0, 1, 2, 3, 4 weeks after embryo initiation) covering globular, heart/torpedo and cotyledon-shaped embryo stages. The general expression patterns for these proteins were consistent with those appeared at 4 weeks of citrus SE. The most striking feature of our study was that five proteins were predicted to be involved in glutathione (GSH) metabolism and anti-oxidative stress, and they exhibited different expression patterns during SE. Based on that oxidative stress has been validated to enhance SE, the preferential representation for anti-oxidative proteins suggests that they could have a developmental role in citrus SE. Some proteins involved in cell division, photosynthesis and detoxification were also identified, and their possible roles in citrus SE were discussed.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="MEDLINE" Owner="NLM">
<PMID Version="1">18989674</PMID>
<DateCreated>
<Year>2009</Year>
<Month>2</Month>
<Day>2</Day>
</DateCreated>
<DateCompleted>
<Year>2009</Year>
<Month>04</Month>
<Day>02</Day>
</DateCompleted>
<DateRevised>
<Year>2009</Year>
<Month>2</Month>
<Day>2</Day>
</DateRevised>
<Article PubModel="Print-Electronic">
<Journal>
<ISSN IssnType="Print">0721-7714</ISSN>
<JournalIssue CitedMedium="Print">
<Volume>28</Volume>
<Issue>2</Issue>
<PubDate>
<Year>2009</Year>
<Month>Feb</Month>
</PubDate>
</JournalIssue>
<Title>Plant cell reports</Title>
<ISOAbbreviation>Plant Cell Rep.</ISOAbbreviation>
</Journal>
<ArticleTitle>Proteomic analysis of somatic embryogenesis in Valencia sweet orange (Citrus sinensis Osbeck).</ArticleTitle>
<Pagination>
<MedlinePgn>281-9</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1007/s00299-008-0633-7</ELocationID>
<Abstract>
<AbstractText>Two dimensional gel electrophoresis combined with matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) was employed to study the somatic embryogenesis (SE) in Valencia sweet orange (Citrus sinensis Osbeck). Twenty-four differentially expressed proteins were identified at five time points of citrus SE (0, 1, 2, 3, 4 weeks after embryo initiation) covering globular, heart/torpedo and cotyledon-shaped embryo stages. The general expression patterns for these proteins were consistent with those appeared at 4 weeks of citrus SE. The most striking feature of our study was that five proteins were predicted to be involved in glutathione (GSH) metabolism and anti-oxidative stress, and they exhibited different expression patterns during SE. Based on that oxidative stress has been validated to enhance SE, the preferential representation for anti-oxidative proteins suggests that they could have a developmental role in citrus SE. Some proteins involved in cell division, photosynthesis and detoxification were also identified, and their possible roles in citrus SE were discussed.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Pan</LastName>
<ForeName>Zhiyong</ForeName>
<Initials>Z</Initials>
<AffiliationInfo>
<Affiliation>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, People's Republic of China. zypan@webmail.hzau.edu.cn</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Guan</LastName>
<ForeName>Rui</ForeName>
<Initials>R</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Zhu</LastName>
<ForeName>Shiping</ForeName>
<Initials>S</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Deng</LastName>
<ForeName>Xiuxin</ForeName>
<Initials>X</Initials>
</Author>
</AuthorList>
<Language>ENG</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2008</Year>
<Month>Nov</Month>
<Day>07</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>Germany</Country>
<MedlineTA>Plant Cell Rep</MedlineTA>
<NlmUniqueID>9880970</NlmUniqueID>
<ISSNLinking>0721-7714</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList>
<MeshHeading>
<DescriptorName UI="D032084" MajorTopicYN="N">Citrus sinensis</DescriptorName>
<QualifierName UI="Q000196" MajorTopicYN="Y">embryology</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D015180" MajorTopicYN="N">Electrophoresis, Gel, Two-Dimensional</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D040901" MajorTopicYN="N">Proteomics</DescriptorName>
<QualifierName UI="Q000379" MajorTopicYN="Y">methods</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D019032" MajorTopicYN="N">Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</DescriptorName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="received">
<Year>2008</Year>
<Month>7</Month>
<Day>19</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted">
<Year>2008</Year>
<Month>10</Month>
<Day>22</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="revised">
<Year>2008</Year>
<Month>10</Month>
<Day>12</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed">
<Year>2008</Year>
<Month>11</Month>
<Day>8</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2009</Year>
<Month>4</Month>
<Day>3</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>2008</Year>
<Month>11</Month>
<Day>8</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">18989674</ArticleId>
<ArticleId IdType="doi">10.1007/s00299-008-0633-7</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/PubMed/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000980 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/PubMed/Curation/biblio.hfd -nk 000980 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Bois
   |area=    OrangerV1
   |flux=    PubMed
   |étape=   Curation
   |type=    RBID
   |clé=     pubmed:18989674
   |texte=   Proteomic analysis of somatic embryogenesis in Valencia sweet orange (Citrus sinensis Osbeck).
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Curation/RBID.i   -Sk "pubmed:18989674" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Curation/biblio.hfd   \
       | NlmPubMed2Wicri -a OrangerV1 

Wicri

This area was generated with Dilib version V0.6.25.
Data generation: Sat Dec 3 17:11:04 2016. Site generation: Wed Mar 6 18:18:32 2024