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Metabolite signature of Candidatus Liberibacter asiaticus infection in two citrus varieties.

Identifieur interne : 000320 ( PubMed/Corpus ); précédent : 000319; suivant : 000321

Metabolite signature of Candidatus Liberibacter asiaticus infection in two citrus varieties.

Auteurs : Elizabeth L. Chin ; Darya O. Mishchuk ; Andrew P. Breksa ; Carolyn M. Slupsky

Source :

Journal of agricultural and food chemistry [ 1520-5118 ] ; 2014.

RBID : pubmed:24959841

English descriptors

KwdEn :
- Citrus sinensis (chemistry), Citrus sinensis (metabolism), Citrus sinensis (microbiology), Fruit (chemistry), Fruit (metabolism), Fruit (microbiology), Limonins (analysis), Magnetic Resonance Spectroscopy, Metabolomics, Plant Diseases (microbiology), Polymerase Chain Reaction, Rhizobiaceae.
MESH :
- chemical , analysis : Limonins.
- chemistry : Citrus sinensis, Fruit.
- metabolism : Citrus sinensis, Fruit.
- microbiology : Citrus sinensis, Fruit, Plant Diseases.
- Magnetic Resonance Spectroscopy, Metabolomics, Polymerase Chain Reaction, Rhizobiaceae.

Abstract

Huanglongbing (HLB), also known as Citrus Greening Disease, is caused by the bacterium 'Candidatus Liberibacter asiaticus' (CLas) and is a serious threat to the citrus industry. To understand the effect of CLas infection on the citrus metabolome, juice from healthy (n = 18), HLB-asymptomatic (n = 18), and HLB-symptomatic Hamlin (n = 18), as well as from healthy (n = 18) and HLB-symptomatic (n = 18) Valencia sweet oranges (from southern and eastern Florida) were evaluated using (1)H NMR-based metabolomics. Differences in the concentration of several metabolites including phenylalanine, histidine, limonin, and synephrine between control or asymptomatic fruit and symptomatic fruit were observed regardless of the citrus variety or location. There were no clear differences between the metabolite profiles of Hamlin fruits classified by PCR as asymptomatic and control, suggesting that some of the control fruit may have been infected. Taken together, these data indicate that infection due to CLas presents a strong metabolic response that is observed across different cultivars and regions, suggesting the potential for generation of metabolite-based biomarkers of CLas infection.

DOI: 10.1021/jf5017434
PubMed: 24959841

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pubmed:24959841

Le document en format XML

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<author><name sortKey="Chin, Elizabeth L" sort="Chin, Elizabeth L" uniqKey="Chin E" first="Elizabeth L" last="Chin">Elizabeth L. Chin</name>
<affiliation><nlm:affiliation>Department of Food Science and Technology, and ‡Department of Nutrition, University of California , Davis, California 95616, United States.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Mishchuk, Darya O" sort="Mishchuk, Darya O" uniqKey="Mishchuk D" first="Darya O" last="Mishchuk">Darya O. Mishchuk</name>
</author>
<author><name sortKey="Breksa, Andrew P" sort="Breksa, Andrew P" uniqKey="Breksa A" first="Andrew P" last="Breksa">Andrew P. Breksa</name>
</author>
<author><name sortKey="Slupsky, Carolyn M" sort="Slupsky, Carolyn M" uniqKey="Slupsky C" first="Carolyn M" last="Slupsky">Carolyn M. Slupsky</name>
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<sourceDesc><biblStruct><analytic><title xml:lang="en">Metabolite signature of Candidatus Liberibacter asiaticus infection in two citrus varieties.</title>
<author><name sortKey="Chin, Elizabeth L" sort="Chin, Elizabeth L" uniqKey="Chin E" first="Elizabeth L" last="Chin">Elizabeth L. Chin</name>
<affiliation><nlm:affiliation>Department of Food Science and Technology, and ‡Department of Nutrition, University of California , Davis, California 95616, United States.</nlm:affiliation>
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</author>
<author><name sortKey="Mishchuk, Darya O" sort="Mishchuk, Darya O" uniqKey="Mishchuk D" first="Darya O" last="Mishchuk">Darya O. Mishchuk</name>
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<author><name sortKey="Breksa, Andrew P" sort="Breksa, Andrew P" uniqKey="Breksa A" first="Andrew P" last="Breksa">Andrew P. Breksa</name>
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<author><name sortKey="Slupsky, Carolyn M" sort="Slupsky, Carolyn M" uniqKey="Slupsky C" first="Carolyn M" last="Slupsky">Carolyn M. Slupsky</name>
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<series><title level="j">Journal of agricultural and food chemistry</title>
<idno type="eISSN">1520-5118</idno>
<imprint><date when="2014" type="published">2014</date>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Citrus sinensis (chemistry)</term>
<term>Citrus sinensis (metabolism)</term>
<term>Citrus sinensis (microbiology)</term>
<term>Fruit (chemistry)</term>
<term>Fruit (metabolism)</term>
<term>Fruit (microbiology)</term>
<term>Limonins (analysis)</term>
<term>Magnetic Resonance Spectroscopy</term>
<term>Metabolomics</term>
<term>Plant Diseases (microbiology)</term>
<term>Polymerase Chain Reaction</term>
<term>Rhizobiaceae</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>Limonins</term>
</keywords>
<keywords scheme="MESH" qualifier="chemistry" xml:lang="en"><term>Citrus sinensis</term>
<term>Fruit</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Citrus sinensis</term>
<term>Fruit</term>
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<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Citrus sinensis</term>
<term>Fruit</term>
<term>Plant Diseases</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Magnetic Resonance Spectroscopy</term>
<term>Metabolomics</term>
<term>Polymerase Chain Reaction</term>
<term>Rhizobiaceae</term>
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<front><div type="abstract" xml:lang="en">Huanglongbing (HLB), also known as Citrus Greening Disease, is caused by the bacterium 'Candidatus Liberibacter asiaticus' (CLas) and is a serious threat to the citrus industry. To understand the effect of CLas infection on the citrus metabolome, juice from healthy (n = 18), HLB-asymptomatic (n = 18), and HLB-symptomatic Hamlin (n = 18), as well as from healthy (n = 18) and HLB-symptomatic (n = 18) Valencia sweet oranges (from southern and eastern Florida) were evaluated using (1)H NMR-based metabolomics. Differences in the concentration of several metabolites including phenylalanine, histidine, limonin, and synephrine between control or asymptomatic fruit and symptomatic fruit were observed regardless of the citrus variety or location. There were no clear differences between the metabolite profiles of Hamlin fruits classified by PCR as asymptomatic and control, suggesting that some of the control fruit may have been infected. Taken together, these data indicate that infection due to CLas presents a strong metabolic response that is observed across different cultivars and regions, suggesting the potential for generation of metabolite-based biomarkers of CLas infection.</div>
</front>
</TEI>
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<DateCreated><Year>2014</Year>
<Month>7</Month>
<Day>16</Day>
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<DateCompleted><Year>2015</Year>
<Month>04</Month>
<Day>09</Day>
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<DateRevised><Year>2015</Year>
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<Title>Journal of agricultural and food chemistry</Title>
<ISOAbbreviation>J. Agric. Food Chem.</ISOAbbreviation>
</Journal>
<ArticleTitle>Metabolite signature of Candidatus Liberibacter asiaticus infection in two citrus varieties.</ArticleTitle>
<Pagination><MedlinePgn>6585-91</MedlinePgn>
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<ELocationID EIdType="doi" ValidYN="Y">10.1021/jf5017434</ELocationID>
<Abstract><AbstractText>Huanglongbing (HLB), also known as Citrus Greening Disease, is caused by the bacterium 'Candidatus Liberibacter asiaticus' (CLas) and is a serious threat to the citrus industry. To understand the effect of CLas infection on the citrus metabolome, juice from healthy (n = 18), HLB-asymptomatic (n = 18), and HLB-symptomatic Hamlin (n = 18), as well as from healthy (n = 18) and HLB-symptomatic (n = 18) Valencia sweet oranges (from southern and eastern Florida) were evaluated using (1)H NMR-based metabolomics. Differences in the concentration of several metabolites including phenylalanine, histidine, limonin, and synephrine between control or asymptomatic fruit and symptomatic fruit were observed regardless of the citrus variety or location. There were no clear differences between the metabolite profiles of Hamlin fruits classified by PCR as asymptomatic and control, suggesting that some of the control fruit may have been infected. Taken together, these data indicate that infection due to CLas presents a strong metabolic response that is observed across different cultivars and regions, suggesting the potential for generation of metabolite-based biomarkers of CLas infection.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Chin</LastName>
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<AffiliationInfo><Affiliation>Department of Food Science and Technology, and ‡Department of Nutrition, University of California , Davis, California 95616, United States.</Affiliation>
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<Author ValidYN="Y"><LastName>Mishchuk</LastName>
<ForeName>Darya O</ForeName>
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<Author ValidYN="Y"><LastName>Breksa</LastName>
<ForeName>Andrew P</ForeName>
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<Language>ENG</Language>
<GrantList CompleteYN="Y"><Grant><GrantID>RR011973</GrantID>
<Acronym>RR</Acronym>
<Agency>NCRR NIH HHS</Agency>
<Country>United States</Country>
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<ArticleDate DateType="Electronic"><Year>2014</Year>
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<Day>08</Day>
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<MedlineJournalInfo><Country>United States</Country>
<MedlineTA>J Agric Food Chem</MedlineTA>
<NlmUniqueID>0374755</NlmUniqueID>
<ISSNLinking>0021-8561</ISSNLinking>
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<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
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<Chemical><RegistryNumber>L0F260866S</RegistryNumber>
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</Chemical>
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<MeshHeadingList><MeshHeading><DescriptorName UI="D032084" MajorTopicYN="N">Citrus sinensis</DescriptorName>
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<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D005638" MajorTopicYN="N">Fruit</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="Y">chemistry</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D036701" MajorTopicYN="N">Limonins</DescriptorName>
<QualifierName UI="Q000032" MajorTopicYN="N">analysis</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D009682" MajorTopicYN="N">Magnetic Resonance Spectroscopy</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D055432" MajorTopicYN="Y">Metabolomics</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016133" MajorTopicYN="N">Polymerase Chain Reaction</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012230" MajorTopicYN="Y">Rhizobiaceae</DescriptorName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
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<Month>6</Month>
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Metabolite signature of Candidatus Liberibacter asiaticus infection in two citrus varieties.

Metabolite signature of Candidatus Liberibacter asiaticus infection in two citrus varieties.

Source :

English descriptors

Abstract

Links to Exploration step

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki