Proteomic analysis of Citrus sinensis roots and leaves in response to long-term magnesium-deficiency.
Identifieur interne : 000202 ( PubMed/Corpus ); précédent : 000201; suivant : 000203Proteomic analysis of Citrus sinensis roots and leaves in response to long-term magnesium-deficiency.
Auteurs : Hao-Yang Peng ; Yi-Ping Qi ; Jinwook Lee ; Lin-Tong Yang ; Peng Guo ; Huan-Xin Jiang ; Li-Song ChenSource :
- BMC genomics [ 1471-2164 ] ; 2015.
English descriptors
- KwdEn :
- MESH :
- chemical , analysis : Plant Proteins.
- chemical , metabolism : Carbon Dioxide, Magnesium, Plant Proteins.
- metabolism : Citrus sinensis, Plant Leaves, Plant Roots.
- Proteomics, Stress, Physiological.
Abstract
Magnesium (Mg)-deficiency is frequently observed in Citrus plantations and is responsible for the loss of productivity and poor fruit quality. Knowledge on the effects of Mg-deficiency on upstream targets is scarce. Seedlings of 'Xuegan' [Citrus sinensis (L.) Osbeck] were irrigated with Mg-deficient (0 mM MgSO4) or Mg-sufficient (1 mM MgSO4) nutrient solution for 16 weeks. Thereafter, we first investigated the proteomic responses of C. sinensis roots and leaves to Mg-deficiency using two-dimensional electrophoresis (2-DE) in order to (a) enrich our understanding of the molecular mechanisms of plants to deal with Mg-deficiency and (b) understand the molecular mechanisms by which Mg-deficiency lead to a decrease in photosynthesis.
DOI: 10.1186/s12864-015-1462-z
PubMed: 25887480
Links to Exploration step
pubmed:25887480Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Proteomic analysis of Citrus sinensis roots and leaves in response to long-term magnesium-deficiency.</title><author><name sortKey="Peng, Hao Yang" sort="Peng, Hao Yang" uniqKey="Peng H" first="Hao-Yang" last="Peng">Hao-Yang Peng</name><affiliation><nlm:affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. 263618957@qq.com.</nlm:affiliation></affiliation></author><author><name sortKey="Qi, Yi Ping" sort="Qi, Yi Ping" uniqKey="Qi Y" first="Yi-Ping" last="Qi">Yi-Ping Qi</name><affiliation><nlm:affiliation>Institute of Materia Medica, Fujian Academy of Medical Sciences, Fuzhou, 350001, China. qiyiping2008@hotmail.com.</nlm:affiliation></affiliation></author><author><name sortKey="Lee, Jinwook" sort="Lee, Jinwook" uniqKey="Lee J" first="Jinwook" last="Lee">Jinwook Lee</name><affiliation><nlm:affiliation>Department of Horticultural Science, Kyungpook National University, Daegu, 702-701, ROK. jl425@knu.ac.kr.</nlm:affiliation></affiliation></author><author><name sortKey="Yang, Lin Tong" sort="Yang, Lin Tong" uniqKey="Yang L" first="Lin-Tong" last="Yang">Lin-Tong Yang</name><affiliation><nlm:affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. talstoy@sina.com.</nlm:affiliation></affiliation></author><author><name sortKey="Guo, Peng" sort="Guo, Peng" uniqKey="Guo P" first="Peng" last="Guo">Peng Guo</name><affiliation><nlm:affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. 6253730@163.com.</nlm:affiliation></affiliation></author><author><name sortKey="Jiang, Huan Xin" sort="Jiang, Huan Xin" uniqKey="Jiang H" first="Huan-Xin" last="Jiang">Huan-Xin Jiang</name><affiliation><nlm:affiliation>College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. jianghx@163.com.</nlm:affiliation></affiliation></author><author><name sortKey="Chen, Li Song" sort="Chen, Li Song" uniqKey="Chen L" first="Li-Song" last="Chen">Li-Song Chen</name><affiliation><nlm:affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. lisongchen2002@hotmail.com.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2015">2015</date><idno type="RBID">pubmed:25887480</idno><idno type="pmid">25887480</idno><idno type="doi">10.1186/s12864-015-1462-z</idno><idno type="wicri:Area/PubMed/Corpus">000202</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Proteomic analysis of Citrus sinensis roots and leaves in response to long-term magnesium-deficiency.</title><author><name sortKey="Peng, Hao Yang" sort="Peng, Hao Yang" uniqKey="Peng H" first="Hao-Yang" last="Peng">Hao-Yang Peng</name><affiliation><nlm:affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. 263618957@qq.com.</nlm:affiliation></affiliation></author><author><name sortKey="Qi, Yi Ping" sort="Qi, Yi Ping" uniqKey="Qi Y" first="Yi-Ping" last="Qi">Yi-Ping Qi</name><affiliation><nlm:affiliation>Institute of Materia Medica, Fujian Academy of Medical Sciences, Fuzhou, 350001, China. qiyiping2008@hotmail.com.</nlm:affiliation></affiliation></author><author><name sortKey="Lee, Jinwook" sort="Lee, Jinwook" uniqKey="Lee J" first="Jinwook" last="Lee">Jinwook Lee</name><affiliation><nlm:affiliation>Department of Horticultural Science, Kyungpook National University, Daegu, 702-701, ROK. jl425@knu.ac.kr.</nlm:affiliation></affiliation></author><author><name sortKey="Yang, Lin Tong" sort="Yang, Lin Tong" uniqKey="Yang L" first="Lin-Tong" last="Yang">Lin-Tong Yang</name><affiliation><nlm:affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. talstoy@sina.com.</nlm:affiliation></affiliation></author><author><name sortKey="Guo, Peng" sort="Guo, Peng" uniqKey="Guo P" first="Peng" last="Guo">Peng Guo</name><affiliation><nlm:affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. 6253730@163.com.</nlm:affiliation></affiliation></author><author><name sortKey="Jiang, Huan Xin" sort="Jiang, Huan Xin" uniqKey="Jiang H" first="Huan-Xin" last="Jiang">Huan-Xin Jiang</name><affiliation><nlm:affiliation>College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. jianghx@163.com.</nlm:affiliation></affiliation></author><author><name sortKey="Chen, Li Song" sort="Chen, Li Song" uniqKey="Chen L" first="Li-Song" last="Chen">Li-Song Chen</name><affiliation><nlm:affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. lisongchen2002@hotmail.com.</nlm:affiliation></affiliation></author></analytic><series><title level="j">BMC genomics</title><idno type="eISSN">1471-2164</idno><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Carbon Dioxide (metabolism)</term><term>Citrus sinensis (metabolism)</term><term>Magnesium (metabolism)</term><term>Plant Leaves (metabolism)</term><term>Plant Proteins (analysis)</term><term>Plant Proteins (metabolism)</term><term>Plant Roots (metabolism)</term><term>Proteomics</term><term>Stress, Physiological</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>Plant Proteins</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Carbon Dioxide</term><term>Magnesium</term><term>Plant Proteins</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Citrus sinensis</term><term>Plant Leaves</term><term>Plant Roots</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Proteomics</term><term>Stress, Physiological</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Magnesium (Mg)-deficiency is frequently observed in Citrus plantations and is responsible for the loss of productivity and poor fruit quality. Knowledge on the effects of Mg-deficiency on upstream targets is scarce. Seedlings of 'Xuegan' [Citrus sinensis (L.) Osbeck] were irrigated with Mg-deficient (0 mM MgSO4) or Mg-sufficient (1 mM MgSO4) nutrient solution for 16 weeks. Thereafter, we first investigated the proteomic responses of C. sinensis roots and leaves to Mg-deficiency using two-dimensional electrophoresis (2-DE) in order to (a) enrich our understanding of the molecular mechanisms of plants to deal with Mg-deficiency and (b) understand the molecular mechanisms by which Mg-deficiency lead to a decrease in photosynthesis.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">25887480</PMID><DateCreated><Year>2015</Year><Month>4</Month><Day>18</Day></DateCreated><DateCompleted><Year>2015</Year><Month>12</Month><Day>23</Day></DateCompleted><DateRevised><Year>2015</Year><Month>4</Month><Day>20</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1471-2164</ISSN><JournalIssue CitedMedium="Internet"><Volume>16</Volume><PubDate><Year>2015</Year><Month>Mar</Month><Day>31</Day></PubDate></JournalIssue><Title>BMC genomics</Title><ISOAbbreviation>BMC Genomics</ISOAbbreviation></Journal><ArticleTitle>Proteomic analysis of Citrus sinensis roots and leaves in response to long-term magnesium-deficiency.</ArticleTitle><Pagination><MedlinePgn>253</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1186/s12864-015-1462-z</ELocationID><Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Magnesium (Mg)-deficiency is frequently observed in Citrus plantations and is responsible for the loss of productivity and poor fruit quality. Knowledge on the effects of Mg-deficiency on upstream targets is scarce. Seedlings of 'Xuegan' [Citrus sinensis (L.) Osbeck] were irrigated with Mg-deficient (0 mM MgSO4) or Mg-sufficient (1 mM MgSO4) nutrient solution for 16 weeks. Thereafter, we first investigated the proteomic responses of C. sinensis roots and leaves to Mg-deficiency using two-dimensional electrophoresis (2-DE) in order to (a) enrich our understanding of the molecular mechanisms of plants to deal with Mg-deficiency and (b) understand the molecular mechanisms by which Mg-deficiency lead to a decrease in photosynthesis.</AbstractText><AbstractText Label="RESULTS" NlmCategory="RESULTS">Fifty-nine upregulated and 31 downregulated protein spots were isolated in Mg-deficient leaves, while only 19 upregulated and 12 downregulated protein spots in Mg-deficient roots. Many Mg-deficiency-responsive proteins were involved in carbohydrate and energy metabolism, followed by protein metabolism, stress responses, nucleic acid metabolism, cell wall and cytoskeleton metabolism, lipid metabolism and cell transport. The larger changes in leaf proteome versus root one in response to Mg-deficiency was further supported by our observation that total soluble protein concentration was decreased by Mg-deficiency in leaves, but unaffected in roots. Mg-deficiency had decreased levels of proteins [i.e. ribulose-1,5-bisphosphate carboxylase (Rubisco), rubisco activase, oxygen evolving enhancer protein 1, photosynthetic electron transfer-like protein, ferredoxin-NADP reductase (FNR), aldolase] involved in photosynthesis, thus decreasing leaf photosynthesis. To cope with Mg-deficiency, C. sinensis leaves and roots might respond adaptively to Mg-deficiency through: improving leaf respiration and lowering root respiration, but increasing (decreasing) the levels of proteins related to ATP synthase in roots (leaves); enhancing the levels of proteins involved in reactive oxygen species (ROS) scavenging and other stress-responsive proteins; accelerating proteolytic cleavage of proteins by proteases, protein transport and amino acid metabolism; and upregulating the levels of proteins involved in cell wall and cytoskeleton metabolism.</AbstractText><AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">Our results demonstrated that proteomics were more affected by long-term Mg-deficiency in leaves than in roots, and that the adaptive responses differed between roots and leaves when exposed to long-term Mg-deficiency. Mg-deficiency decreased the levels of many proteins involved in photosynthesis, thus decreasing leaf photosynthesis.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Peng</LastName><ForeName>Hao-Yang</ForeName><Initials>HY</Initials><AffiliationInfo><Affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. 263618957@qq.com.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. 263618957@qq.com.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Institute of Horticultural Plant Physiology, Biochemistry, and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. 263618957@qq.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Qi</LastName><ForeName>Yi-Ping</ForeName><Initials>YP</Initials><AffiliationInfo><Affiliation>Institute of Materia Medica, Fujian Academy of Medical Sciences, Fuzhou, 350001, China. qiyiping2008@hotmail.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lee</LastName><ForeName>Jinwook</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Department of Horticultural Science, Kyungpook National University, Daegu, 702-701, ROK. jl425@knu.ac.kr.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yang</LastName><ForeName>Lin-Tong</ForeName><Initials>LT</Initials><AffiliationInfo><Affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. talstoy@sina.com.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Institute of Horticultural Plant Physiology, Biochemistry, and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. talstoy@sina.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Guo</LastName><ForeName>Peng</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. 6253730@163.com.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Institute of Horticultural Plant Physiology, Biochemistry, and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. 6253730@163.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jiang</LastName><ForeName>Huan-Xin</ForeName><Initials>HX</Initials><AffiliationInfo><Affiliation>College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. jianghx@163.com.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Institute of Horticultural Plant Physiology, Biochemistry, and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. jianghx@163.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chen</LastName><ForeName>Li-Song</ForeName><Initials>LS</Initials><AffiliationInfo><Affiliation>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. lisongchen2002@hotmail.com.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Institute of Horticultural Plant Physiology, Biochemistry, and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. lisongchen2002@hotmail.com.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Fujian Key Laboratory for Plant Molecular and Cell Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. lisongchen2002@hotmail.com.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>The Higher Educational Key Laboratory of Fujian Province for Soil Ecosystem Health and Regulation, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. lisongchen2002@hotmail.com.</Affiliation></AffiliationInfo></Author></AuthorList><Language>ENG</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2015</Year><Month>Mar</Month><Day>31</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>BMC Genomics</MedlineTA><NlmUniqueID>100965258</NlmUniqueID><ISSNLinking>1471-2164</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>142M471B3J</RegistryNumber><NameOfSubstance UI="D002245">Carbon Dioxide</NameOfSubstance></Chemical><Chemical><RegistryNumber>I38ZP9992A</RegistryNumber><NameOfSubstance 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RefType="Cites"><RefSource>Biochem J. 2001 Nov 15;360(Pt 1):225-31</RefSource><PMID Version="1">11696011</PMID></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D002245" MajorTopicYN="N">Carbon Dioxide</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032084" MajorTopicYN="N">Citrus sinensis</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008274" MajorTopicYN="N">Magnesium</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000032" MajorTopicYN="Y">analysis</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D040901" MajorTopicYN="Y">Proteomics</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013312" MajorTopicYN="N">Stress, Physiological</DescriptorName></MeshHeading></MeshHeadingList><OtherID Source="NLM">PMC4383213</OtherID></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year><Month>11</Month><Day>17</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2015</Year><Month>3</Month><Day>9</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2015</Year><Month>4</Month><Day>19</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2015</Year><Month>4</Month><Day>19</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2015</Year><Month>12</Month><Day>24</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">25887480</ArticleId><ArticleId IdType="doi">10.1186/s12864-015-1462-z</ArticleId><ArticleId IdType="pii">10.1186/s12864-015-1462-z</ArticleId><ArticleId IdType="pmc">PMC4383213</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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