OrangerV1, PubMed, Corpus, bibRecord, 000097

Coupling a branch enclosure with differential mobility spectrometry to isolate and measure plant volatiles in contained greenhouse settings.

Identifieur interne : 000097 ( PubMed/Corpus ); précédent : 000096; suivant : 000098

Coupling a branch enclosure with differential mobility spectrometry to isolate and measure plant volatiles in contained greenhouse settings.

Auteurs : Mitchell M. Mccartney ; Sierra L. Spitulski ; Alberto Pasamontes ; Daniel J. Peirano ; Michael J. Schirle ; Raquel Cumeras ; Jason D. Simmons ; Jeffrey L. Ware ; Joshua F. Brown ; Alexandria J Y. Poh ; Seth C. Dike ; Elizabeth K. Foster ; Kristine E. Godfrey ; Cristina E. Davis

Source :

Talanta [ 1873-3573 ] ; 2016.

RBID : pubmed:26695246

English descriptors

KwdEn :
- Citrus (chemistry), Citrus (growth & development), Environment, Controlled, Humidity, Spectrum Analysis (methods), Volatile Organic Compounds (analysis), Volatile Organic Compounds (chemistry), Volatile Organic Compounds (isolation & purification).
MESH :
- chemical , analysis : Volatile Organic Compounds.
- chemistry : Citrus, Volatile Organic Compounds.
- growth & development : Citrus.
- chemical , isolation & purification : Volatile Organic Compounds.
- methods : Spectrum Analysis.
- Environment, Controlled, Humidity.

Abstract

Volatile organic compounds (VOCs) are off-gassed from all living organisms and represent end products of metabolic pathways within the system. In agricultural systems, these VOCs can provide important information on plant health and can ordinarily be measured non-invasively without harvesting tissue from the plants. Previously we reported a portable gas chromatography/differential mobility spectrometry (GC/DMS) system that could distinguish VOC profiles of pathogen-infected citrus from healthy trees before visual symptoms of disease were present. These measurements were taken directly from canopies in the field, but the sampling and analysis protocol did not readily transfer to a controlled greenhouse study where the ambient background air was saturated with volatiles contained in the facility. In this study, we describe for the first time a branch enclosure uniquely coupled with GC/DMS to isolate and measure plant volatiles. To test our system, we sought to replicate our field experiment within a contained greenhouse and distinguish the VOC profiles of healthy versus citrus infected with Candidatus Liberibacter asiaticus. We indeed confirm the ability to track infection-related trace biogenic VOCs using our sampling system and method and we now show this difference in Lisbon lemons (Citrus×limon L. Burm. f.), a varietal not previously reported. Furthermore, the system differentiates the volatile profiles of Lisbon lemons from Washington navels [Citrus sinensis (L.) Osbeck] and also from Tango mandarins (Citrus reticulata Blanco). Based on this evidence, we believe this enclosure-GC/DMS system is adaptable to other volatile-based investigations of plant diseases in greenhouses or other contained settings, and this system may be helpful for basic science research studies of infection mechanisms.

DOI: 10.1016/j.talanta.2015.08.039
PubMed: 26695246

Links to Exploration step

pubmed:26695246

Le document en format XML

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<term>Spectrum Analysis (methods)</term>
<term>Volatile Organic Compounds (analysis)</term>
<term>Volatile Organic Compounds (chemistry)</term>
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<front><div type="abstract" xml:lang="en">Volatile organic compounds (VOCs) are off-gassed from all living organisms and represent end products of metabolic pathways within the system. In agricultural systems, these VOCs can provide important information on plant health and can ordinarily be measured non-invasively without harvesting tissue from the plants. Previously we reported a portable gas chromatography/differential mobility spectrometry (GC/DMS) system that could distinguish VOC profiles of pathogen-infected citrus from healthy trees before visual symptoms of disease were present. These measurements were taken directly from canopies in the field, but the sampling and analysis protocol did not readily transfer to a controlled greenhouse study where the ambient background air was saturated with volatiles contained in the facility. In this study, we describe for the first time a branch enclosure uniquely coupled with GC/DMS to isolate and measure plant volatiles. To test our system, we sought to replicate our field experiment within a contained greenhouse and distinguish the VOC profiles of healthy versus citrus infected with Candidatus Liberibacter asiaticus. We indeed confirm the ability to track infection-related trace biogenic VOCs using our sampling system and method and we now show this difference in Lisbon lemons (Citrus×limon L. Burm. f.), a varietal not previously reported. Furthermore, the system differentiates the volatile profiles of Lisbon lemons from Washington navels [Citrus sinensis (L.) Osbeck] and also from Tango mandarins (Citrus reticulata Blanco). Based on this evidence, we believe this enclosure-GC/DMS system is adaptable to other volatile-based investigations of plant diseases in greenhouses or other contained settings, and this system may be helpful for basic science research studies of infection mechanisms.</div>
</front>
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<Title>Talanta</Title>
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<ArticleTitle>Coupling a branch enclosure with differential mobility spectrometry to isolate and measure plant volatiles in contained greenhouse settings.</ArticleTitle>
<Pagination><MedlinePgn>148-54</MedlinePgn>
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<Abstract><AbstractText>Volatile organic compounds (VOCs) are off-gassed from all living organisms and represent end products of metabolic pathways within the system. In agricultural systems, these VOCs can provide important information on plant health and can ordinarily be measured non-invasively without harvesting tissue from the plants. Previously we reported a portable gas chromatography/differential mobility spectrometry (GC/DMS) system that could distinguish VOC profiles of pathogen-infected citrus from healthy trees before visual symptoms of disease were present. These measurements were taken directly from canopies in the field, but the sampling and analysis protocol did not readily transfer to a controlled greenhouse study where the ambient background air was saturated with volatiles contained in the facility. In this study, we describe for the first time a branch enclosure uniquely coupled with GC/DMS to isolate and measure plant volatiles. To test our system, we sought to replicate our field experiment within a contained greenhouse and distinguish the VOC profiles of healthy versus citrus infected with Candidatus Liberibacter asiaticus. We indeed confirm the ability to track infection-related trace biogenic VOCs using our sampling system and method and we now show this difference in Lisbon lemons (Citrus×limon L. Burm. f.), a varietal not previously reported. Furthermore, the system differentiates the volatile profiles of Lisbon lemons from Washington navels [Citrus sinensis (L.) Osbeck] and also from Tango mandarins (Citrus reticulata Blanco). Based on this evidence, we believe this enclosure-GC/DMS system is adaptable to other volatile-based investigations of plant diseases in greenhouses or other contained settings, and this system may be helpful for basic science research studies of infection mechanisms.</AbstractText>
<CopyrightInformation>Copyright © 2015 Elsevier B.V. All rights reserved.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>McCartney</LastName>
<ForeName>Mitchell M</ForeName>
<Initials>MM</Initials>
<AffiliationInfo><Affiliation>Mechanical and Aerospace Engineering, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA.</Affiliation>
</AffiliationInfo>
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<ForeName>Sierra L</ForeName>
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<AffiliationInfo><Affiliation>Mechanical and Aerospace Engineering, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA.</Affiliation>
</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Pasamontes</LastName>
<ForeName>Alberto</ForeName>
<Initials>A</Initials>
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<ForeName>Daniel J</ForeName>
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<ForeName>Raquel</ForeName>
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<Author ValidYN="Y"><LastName>Simmons</LastName>
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</AffiliationInfo>
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<Initials>JL</Initials>
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</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Dike</LastName>
<ForeName>Seth C</ForeName>
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</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Foster</LastName>
<ForeName>Elizabeth K</ForeName>
<Initials>EK</Initials>
<AffiliationInfo><Affiliation>Contained Research Facility, University of California, Davis, 555 Hopkins Road, Davis, CA 95616, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Godfrey</LastName>
<ForeName>Kristine E</ForeName>
<Initials>KE</Initials>
<AffiliationInfo><Affiliation>Contained Research Facility, University of California, Davis, 555 Hopkins Road, Davis, CA 95616, USA.</Affiliation>
</AffiliationInfo>
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<ForeName>Cristina E</ForeName>
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<AffiliationInfo><Affiliation>Mechanical and Aerospace Engineering, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA. Electronic address: cedavis@ucdavis.edu.</Affiliation>
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<MeshHeadingList><MeshHeading><DescriptorName UI="D002957" MajorTopicYN="N">Citrus</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="Y">chemistry</QualifierName>
<QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName>
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<Keyword MajorTopicYN="N">Differential mobility spectrometry (DMS)</Keyword>
<Keyword MajorTopicYN="N">Field asymmetric ion mobility spectrometry (FAIMS)</Keyword>
<Keyword MajorTopicYN="N">Huanglongbing (HLB)</Keyword>
<Keyword MajorTopicYN="N">Volatile organic compounds (VOCs)</Keyword>
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   |texte=   Coupling a branch enclosure with differential mobility spectrometry to isolate and measure plant volatiles in contained greenhouse settings.
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Coupling a branch enclosure with differential mobility spectrometry to isolate and measure plant volatiles in contained greenhouse settings.

Coupling a branch enclosure with differential mobility spectrometry to isolate and measure plant volatiles in contained greenhouse settings.

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