Gas chromatography coupled to mass spectrometry analysis of volatiles, sugars, organic acids and aminoacids in Valencia Late orange juice and reliability of the Automated Mass Spectral Deconvolution and Identification System for their automatic identification and quantification.
Identifieur interne : 000595 ( PubMed/Checkpoint ); précédent : 000594; suivant : 000596Gas chromatography coupled to mass spectrometry analysis of volatiles, sugars, organic acids and aminoacids in Valencia Late orange juice and reliability of the Automated Mass Spectral Deconvolution and Identification System for their automatic identification and quantification.
Auteurs : Manuela Cerdán-Calero [Espagne] ; José María Sendra ; Enrique SentandreuSource :
- Journal of chromatography. A [ 1873-3778 ] ; 2012.
English descriptors
- KwdEn :
- Amino Acids (analysis), Beverages (analysis), Carbohydrates (analysis), Citrus sinensis (chemistry), Gas Chromatography-Mass Spectrometry (methods), Gas Chromatography-Mass Spectrometry (standards), Odors (analysis), Organic Chemicals (analysis), Reproducibility of Results, Solid Phase Microextraction.
- MESH :
- chemical , analysis : Amino Acids, Carbohydrates, Organic Chemicals.
- analysis : Beverages, Odors.
- chemistry : Citrus sinensis.
- methods : Gas Chromatography-Mass Spectrometry.
- standards : Gas Chromatography-Mass Spectrometry.
- Reproducibility of Results, Solid Phase Microextraction.
Abstract
Neutral volatiles and non-volatile polar compounds (sugars, organics acids and aminoacids) present in Valencia Late orange juice have been analysed by Gas Chromatography coupled to Mass Spectrometry (GC-MS). Before analysis, the neutral volatiles have been extracted by Headspace-Solid Phase Microextraction (HS-SPME), and the non-volatile polar compounds have been transformed to their corresponding volatile trimethylsilyl (TMS) derivatives. From the resulting raw GC-MS data files, the reliability of the Automated Mass Spectral Deconvolution and Identification System (AMDIS) to perform accurate identification and quantification of the compounds present in the sample has been tested. Hence, both raw GC-MS data files have been processed automatically by using AMDIS and manually by using Xcalibur™, the manufacturer's data processing software for the GC-MS platform used. Results indicate that the reliability of AMDIS for accurate identification and quantification of the compounds present in the sample strongly depends on a number of operational settings, for both the MS and AMDIS, which must be optimized for the particular type of assayed sample. After optimization of these settings, AMDIS and Xcalibur™ yield practically the same results. A total of 85 volatiles and 22 polar compounds have been identified and quantified in Valencia Late orange juice.
DOI: 10.1016/j.chroma.2012.04.014
PubMed: 22533907
Affiliations:
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Agustín Escardino 7, 46980 Paterna, Valencia</wicri:regionArea><wicri:noRegion>Valencia</wicri:noRegion></affiliation></author><author><name sortKey="Sendra, Jose Maria" sort="Sendra, Jose Maria" uniqKey="Sendra J" first="José María" last="Sendra">José María Sendra</name></author><author><name sortKey="Sentandreu, Enrique" sort="Sentandreu, Enrique" uniqKey="Sentandreu E" first="Enrique" last="Sentandreu">Enrique Sentandreu</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2012">2012</date><idno type="RBID">pubmed:22533907</idno><idno type="pmid">22533907</idno><idno type="doi">10.1016/j.chroma.2012.04.014</idno><idno type="wicri:Area/PubMed/Corpus">000602</idno><idno type="wicri:Area/PubMed/Curation">000602</idno><idno type="wicri:Area/PubMed/Checkpoint">000602</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Gas chromatography coupled to mass spectrometry analysis of volatiles, sugars, organic acids and aminoacids in Valencia Late orange juice and reliability of the Automated Mass Spectral Deconvolution and Identification System for their automatic identification and quantification.</title><author><name sortKey="Cerdan Calero, Manuela" sort="Cerdan Calero, Manuela" uniqKey="Cerdan Calero M" first="Manuela" last="Cerdán-Calero">Manuela Cerdán-Calero</name><affiliation wicri:level="1"><nlm:affiliation>Instituto de Agroquímica y Tecnología de Alimentos-IATA-CSIC, Avd. Agustín Escardino 7, 46980 Paterna, Valencia, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto de Agroquímica y Tecnología de Alimentos-IATA-CSIC, Avd. Agustín Escardino 7, 46980 Paterna, Valencia</wicri:regionArea><wicri:noRegion>Valencia</wicri:noRegion></affiliation></author><author><name sortKey="Sendra, Jose Maria" sort="Sendra, Jose Maria" uniqKey="Sendra J" first="José María" last="Sendra">José María Sendra</name></author><author><name sortKey="Sentandreu, Enrique" sort="Sentandreu, Enrique" uniqKey="Sentandreu E" first="Enrique" last="Sentandreu">Enrique Sentandreu</name></author></analytic><series><title level="j">Journal of chromatography. A</title><idno type="eISSN">1873-3778</idno><imprint><date when="2012" type="published">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acids (analysis)</term><term>Beverages (analysis)</term><term>Carbohydrates (analysis)</term><term>Citrus sinensis (chemistry)</term><term>Gas Chromatography-Mass Spectrometry (methods)</term><term>Gas Chromatography-Mass Spectrometry (standards)</term><term>Odors (analysis)</term><term>Organic Chemicals (analysis)</term><term>Reproducibility of Results</term><term>Solid Phase Microextraction</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>Amino Acids</term><term>Carbohydrates</term><term>Organic Chemicals</term></keywords><keywords scheme="MESH" qualifier="analysis" xml:lang="en"><term>Beverages</term><term>Odors</term></keywords><keywords scheme="MESH" qualifier="chemistry" xml:lang="en"><term>Citrus sinensis</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Gas Chromatography-Mass Spectrometry</term></keywords><keywords scheme="MESH" qualifier="standards" xml:lang="en"><term>Gas Chromatography-Mass Spectrometry</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Reproducibility of Results</term><term>Solid Phase Microextraction</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Neutral volatiles and non-volatile polar compounds (sugars, organics acids and aminoacids) present in Valencia Late orange juice have been analysed by Gas Chromatography coupled to Mass Spectrometry (GC-MS). Before analysis, the neutral volatiles have been extracted by Headspace-Solid Phase Microextraction (HS-SPME), and the non-volatile polar compounds have been transformed to their corresponding volatile trimethylsilyl (TMS) derivatives. From the resulting raw GC-MS data files, the reliability of the Automated Mass Spectral Deconvolution and Identification System (AMDIS) to perform accurate identification and quantification of the compounds present in the sample has been tested. Hence, both raw GC-MS data files have been processed automatically by using AMDIS and manually by using Xcalibur™, the manufacturer's data processing software for the GC-MS platform used. Results indicate that the reliability of AMDIS for accurate identification and quantification of the compounds present in the sample strongly depends on a number of operational settings, for both the MS and AMDIS, which must be optimized for the particular type of assayed sample. After optimization of these settings, AMDIS and Xcalibur™ yield practically the same results. A total of 85 volatiles and 22 polar compounds have been identified and quantified in Valencia Late orange juice.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">22533907</PMID><DateCreated><Year>2012</Year><Month>5</Month><Day>14</Day></DateCreated><DateCompleted><Year>2012</Year><Month>07</Month><Day>17</Day></DateCompleted><DateRevised><Year>2012</Year><Month>5</Month><Day>14</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1873-3778</ISSN><JournalIssue CitedMedium="Internet"><Volume>1241</Volume><PubDate><Year>2012</Year><Month>Jun</Month><Day>8</Day></PubDate></JournalIssue><Title>Journal of chromatography. A</Title><ISOAbbreviation>J Chromatogr A</ISOAbbreviation></Journal><ArticleTitle>Gas chromatography coupled to mass spectrometry analysis of volatiles, sugars, organic acids and aminoacids in Valencia Late orange juice and reliability of the Automated Mass Spectral Deconvolution and Identification System for their automatic identification and quantification.</ArticleTitle><Pagination><MedlinePgn>84-95</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.chroma.2012.04.014</ELocationID><Abstract><AbstractText>Neutral volatiles and non-volatile polar compounds (sugars, organics acids and aminoacids) present in Valencia Late orange juice have been analysed by Gas Chromatography coupled to Mass Spectrometry (GC-MS). Before analysis, the neutral volatiles have been extracted by Headspace-Solid Phase Microextraction (HS-SPME), and the non-volatile polar compounds have been transformed to their corresponding volatile trimethylsilyl (TMS) derivatives. From the resulting raw GC-MS data files, the reliability of the Automated Mass Spectral Deconvolution and Identification System (AMDIS) to perform accurate identification and quantification of the compounds present in the sample has been tested. Hence, both raw GC-MS data files have been processed automatically by using AMDIS and manually by using Xcalibur™, the manufacturer's data processing software for the GC-MS platform used. Results indicate that the reliability of AMDIS for accurate identification and quantification of the compounds present in the sample strongly depends on a number of operational settings, for both the MS and AMDIS, which must be optimized for the particular type of assayed sample. After optimization of these settings, AMDIS and Xcalibur™ yield practically the same results. A total of 85 volatiles and 22 polar compounds have been identified and quantified in Valencia Late orange juice.</AbstractText><CopyrightInformation>Copyright © 2012 Elsevier B.V. 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