Prediction and functional analysis of the sweet orange protein-protein interaction network.
Identifieur interne : 000295 ( PubMed/Checkpoint ); précédent : 000294; suivant : 000296Prediction and functional analysis of the sweet orange protein-protein interaction network.
Auteurs : Yu-Duan Ding ; Ji-Wei Chang ; Jing Guo ; Dijun Chen ; Sen Li ; Qiang Xu ; Xiu-Xin Deng ; Yun-Jiang Cheng [République populaire de Chine] ; Ling-Ling ChenSource :
- BMC plant biology [ 1471-2229 ] ; 2014.
English descriptors
- KwdEn :
- MESH :
- chemical , metabolism : Plant Growth Regulators.
- genetics : Citrus sinensis.
- metabolism : Citrus sinensis.
- Genome, Plant, Protein Interaction Maps, Sequence Analysis, RNA.
Abstract
Sweet orange (Citrus sinensis) is one of the most important fruits world-wide. Because it is a woody plant with a long growth cycle, genetic studies of sweet orange are lagging behind those of other species.
DOI: 10.1186/s12870-014-0213-7
PubMed: 25091279
Affiliations:
Links toward previous steps (curation, corpus...)
Links to Exploration step
pubmed:25091279Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Prediction and functional analysis of the sweet orange protein-protein interaction network.</title><author><name sortKey="Ding, Yu Duan" sort="Ding, Yu Duan" uniqKey="Ding Y" first="Yu-Duan" last="Ding">Yu-Duan Ding</name></author><author><name sortKey="Chang, Ji Wei" sort="Chang, Ji Wei" uniqKey="Chang J" first="Ji-Wei" last="Chang">Ji-Wei Chang</name></author><author><name sortKey="Guo, Jing" sort="Guo, Jing" uniqKey="Guo J" first="Jing" last="Guo">Jing Guo</name></author><author><name sortKey="Chen, Dijun" sort="Chen, Dijun" uniqKey="Chen D" first="Dijun" last="Chen">Dijun Chen</name></author><author><name sortKey="Li, Sen" sort="Li, Sen" uniqKey="Li S" first="Sen" last="Li">Sen Li</name></author><author><name sortKey="Xu, Qiang" sort="Xu, Qiang" uniqKey="Xu Q" first="Qiang" last="Xu">Qiang Xu</name></author><author><name sortKey="Deng, Xiu Xin" sort="Deng, Xiu Xin" uniqKey="Deng X" first="Xiu-Xin" last="Deng">Xiu-Xin Deng</name></author><author><name sortKey="Cheng, Yun Jiang" sort="Cheng, Yun Jiang" uniqKey="Cheng Y" first="Yun-Jiang" last="Cheng">Yun-Jiang Cheng</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology of Ministry of Education, Huazhong Agricultural University, Wuhan 430070, People's Republic of China. yjcheng@mail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology of Ministry of Education, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><wicri:noRegion>Wuhan 430070</wicri:noRegion></affiliation></author><author><name sortKey="Chen, Ling Ling" sort="Chen, Ling Ling" uniqKey="Chen L" first="Ling-Ling" last="Chen">Ling-Ling Chen</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2014">2014</date><idno type="RBID">pubmed:25091279</idno><idno type="pmid">25091279</idno><idno type="doi">10.1186/s12870-014-0213-7</idno><idno type="wicri:Area/PubMed/Corpus">000314</idno><idno type="wicri:Area/PubMed/Curation">000314</idno><idno type="wicri:Area/PubMed/Checkpoint">000314</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Prediction and functional analysis of the sweet orange protein-protein interaction network.</title><author><name sortKey="Ding, Yu Duan" sort="Ding, Yu Duan" uniqKey="Ding Y" first="Yu-Duan" last="Ding">Yu-Duan Ding</name></author><author><name sortKey="Chang, Ji Wei" sort="Chang, Ji Wei" uniqKey="Chang J" first="Ji-Wei" last="Chang">Ji-Wei Chang</name></author><author><name sortKey="Guo, Jing" sort="Guo, Jing" uniqKey="Guo J" first="Jing" last="Guo">Jing Guo</name></author><author><name sortKey="Chen, Dijun" sort="Chen, Dijun" uniqKey="Chen D" first="Dijun" last="Chen">Dijun Chen</name></author><author><name sortKey="Li, Sen" sort="Li, Sen" uniqKey="Li S" first="Sen" last="Li">Sen Li</name></author><author><name sortKey="Xu, Qiang" sort="Xu, Qiang" uniqKey="Xu Q" first="Qiang" last="Xu">Qiang Xu</name></author><author><name sortKey="Deng, Xiu Xin" sort="Deng, Xiu Xin" uniqKey="Deng X" first="Xiu-Xin" last="Deng">Xiu-Xin Deng</name></author><author><name sortKey="Cheng, Yun Jiang" sort="Cheng, Yun Jiang" uniqKey="Cheng Y" first="Yun-Jiang" last="Cheng">Yun-Jiang Cheng</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology of Ministry of Education, Huazhong Agricultural University, Wuhan 430070, People's Republic of China. yjcheng@mail.hzau.edu.cn.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology of Ministry of Education, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><wicri:noRegion>Wuhan 430070</wicri:noRegion></affiliation></author><author><name sortKey="Chen, Ling Ling" sort="Chen, Ling Ling" uniqKey="Chen L" first="Ling-Ling" last="Chen">Ling-Ling Chen</name></author></analytic><series><title level="j">BMC plant biology</title><idno type="eISSN">1471-2229</idno><imprint><date when="2014" type="published">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Citrus sinensis (genetics)</term><term>Citrus sinensis (metabolism)</term><term>Genome, Plant</term><term>Plant Growth Regulators (metabolism)</term><term>Protein Interaction Maps</term><term>Sequence Analysis, RNA</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Plant Growth Regulators</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Citrus sinensis</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Citrus sinensis</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Genome, Plant</term><term>Protein Interaction Maps</term><term>Sequence Analysis, RNA</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Sweet orange (Citrus sinensis) is one of the most important fruits world-wide. Because it is a woody plant with a long growth cycle, genetic studies of sweet orange are lagging behind those of other species.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">25091279</PMID><DateCreated><Year>2014</Year><Month>8</Month><Day>22</Day></DateCreated><DateCompleted><Year>2015</Year><Month>05</Month><Day>14</Day></DateCompleted><DateRevised><Year>2015</Year><Month>8</Month><Day>5</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1471-2229</ISSN><JournalIssue CitedMedium="Internet"><Volume>14</Volume><PubDate><Year>2014</Year><Month>Aug</Month><Day>05</Day></PubDate></JournalIssue><Title>BMC plant biology</Title><ISOAbbreviation>BMC Plant Biol.</ISOAbbreviation></Journal><ArticleTitle>Prediction and functional analysis of the sweet orange protein-protein interaction network.</ArticleTitle><Pagination><MedlinePgn>213</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1186/s12870-014-0213-7</ELocationID><Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Sweet orange (Citrus sinensis) is one of the most important fruits world-wide. Because it is a woody plant with a long growth cycle, genetic studies of sweet orange are lagging behind those of other species.</AbstractText><AbstractText Label="RESULTS" NlmCategory="RESULTS">In this analysis, we employed ortholog identification and domain combination methods to predict the protein-protein interaction (PPI) network for sweet orange. The K-nearest neighbors (KNN) classification method was used to verify and filter the network. The final predicted PPI network, CitrusNet, contained 8,195 proteins with 124,491 interactions. The quality of CitrusNet was evaluated using gene ontology (GO) and Mapman annotations, which confirmed the reliability of the network. In addition, we calculated the expression difference of interacting genes (EDI) in CitrusNet using RNA-seq data from four sweet orange tissues, and also analyzed the EDI distribution and variation in different sub-networks.</AbstractText><AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">Gene expression in CitrusNet has significant modular features. Target of rapamycin (TOR) protein served as the central node of the hormone-signaling sub-network. All evidence supported the idea that TOR can integrate various hormone signals and affect plant growth. CitrusNet provides valuable resources for the study of biological functions in sweet orange.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Ding</LastName><ForeName>Yu-Duan</ForeName><Initials>YD</Initials></Author><Author ValidYN="Y"><LastName>Chang</LastName><ForeName>Ji-Wei</ForeName><Initials>JW</Initials></Author><Author ValidYN="Y"><LastName>Guo</LastName><ForeName>Jing</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Chen</LastName><ForeName>Dijun</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Sen</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Xu</LastName><ForeName>Qiang</ForeName><Initials>Q</Initials></Author><Author ValidYN="Y"><LastName>Deng</LastName><ForeName>Xiu-Xin</ForeName><Initials>XX</Initials></Author><Author ValidYN="Y"><LastName>Cheng</LastName><ForeName>Yun-Jiang</ForeName><Initials>YJ</Initials><AffiliationInfo><Affiliation>Key Laboratory of Horticultural Plant Biology of Ministry of Education, Huazhong Agricultural University, Wuhan 430070, People's Republic of China. yjcheng@mail.hzau.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chen</LastName><ForeName>Ling-Ling</ForeName><Initials>LL</Initials></Author></AuthorList><Language>ENG</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2014</Year><Month>Aug</Month><Day>05</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>BMC Plant Biol</MedlineTA><NlmUniqueID>100967807</NlmUniqueID><ISSNLinking>1471-2229</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010937">Plant Growth Regulators</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="Cites"><RefSource>Nat Protoc. 2012 Mar;7(3):562-78</RefSource><PMID Version="1">22383036</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Biosyst. 2012 Feb;8(2):453-63</RefSource><PMID Version="1">22159132</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nat Rev Genet. 2013 May;14(5):360-6</RefSource><PMID Version="1">23552219</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2012 Jan;40(Database issue):D1202-10</RefSource><PMID Version="1">22140109</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nature. 1999 Nov 4;402(6757):86-90</RefSource><PMID Version="1">10573422</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Science. 2000 Jan 7;287(5450):116-22</RefSource><PMID Version="1">10615043</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nature. 2000 Feb 10;403(6770):623-7</RefSource><PMID Version="1">10688190</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nat Genet. 2000 Oct;26(2):141-2</RefSource><PMID Version="1">11017064</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Proc Natl Acad Sci U S A. 2001 Jun 19;98(13):7037-44</RefSource><PMID Version="1">11416184</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2001;17 Suppl 1:S296-305</RefSource><PMID Version="1">11473021</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2002 Jan 1;30(1):303-5</RefSource><PMID Version="1">11752321</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Genome Res. 2002 Jan;12(1):37-46</RefSource><PMID Version="1">11779829</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Curr Opin Struct Biol. 2002 Jun;12(3):368-73</RefSource><PMID Version="1">12127457</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Plant Mol Biol. 2002 Dec;50(6):855-70</RefSource><PMID Version="1">12516858</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Ann Bot. 2003 May;91(6):605-12</RefSource><PMID Version="1">12714359</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2003;19 Suppl 1:i264-71</RefSource><PMID Version="1">12855469</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2003 Nov 1;31(21):6283-9</RefSource><PMID Version="1">14576317</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Science. 2003 Dec 5;302(5651):1727-36</RefSource><PMID Version="1">14605208</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2004 Jan 1;32(Database issue):D258-61</RefSource><PMID Version="1">14681407</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Exp Bot. 2004 Jan;55(395):181-8</RefSource><PMID Version="1">14623901</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Plant J. 2004 Mar;37(6):914-39</RefSource><PMID Version="1">14996223</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Oncogene. 2004 Apr 19;23(18):3151-71</RefSource><PMID Version="1">15094765</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Science. 2004 Jul 2;305(5680):86-90</RefSource><PMID Version="1">15232106</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Cell. 1993 Feb 12;72(3):427-41</RefSource><PMID Version="1">8431946</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Curr Biol. 1998 Nov 19;8(23):1259-67</RefSource><PMID Version="1">9822578</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Curr Opin Genet Dev. 1999 Feb;9(1):49-54</RefSource><PMID Version="1">10072357</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2004 Nov 22;20(17):3273-6</RefSource><PMID Version="1">15217821</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2004;32(21):6312-20</RefSource><PMID Version="1">15576357</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Genome Inform. 2003;14:250-9</RefSource><PMID Version="1">15706539</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Tree Physiol. 2005 Jun;25(6):661-72</RefSource><PMID Version="1">15805086</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nature. 2005 Oct 20;437(7062):1173-8</RefSource><PMID Version="1">16189514</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Exp Bot. 2006;57(7):1563-71</RefSource><PMID Version="1">16551681</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Cell Proteomics. 2006 Sep;5(9):1658-66</RefSource><PMID Version="1">16825183</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>BMC Bioinformatics. 2006;7:488</RefSource><PMID Version="1">17087821</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Proc Natl Acad Sci U S A. 2007 Mar 13;104(11):4730-5</RefSource><PMID Version="1">17360592</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>EMBO Rep. 2007 Sep;8(9):864-70</RefSource><PMID Version="1">17721444</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Plant Physiol. 2007 Oct;145(2):317-29</RefSource><PMID Version="1">17675552</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2008 Jan;36(Database issue):D281-8</RefSource><PMID Version="1">18039703</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Cell Host Microbe. 2008 Jun 12;3(6):348-51</RefSource><PMID Version="1">18541211</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2008 Jun 15;24(12):1442-7</RefSource><PMID Version="1">18434343</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nat Methods. 2008 Jul;5(7):621-8</RefSource><PMID Version="1">18516045</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Autophagy. 2008 Oct;4(7):851-65</RefSource><PMID Version="1">18670193</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2009 Jan;37(Database issue):D412-6</RefSource><PMID Version="1">18940858</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>BMC Bioinformatics. 2008;9 Suppl 12:S11</RefSource><PMID Version="1">19091010</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2009 Feb;37(3):825-31</RefSource><PMID Version="1">19095691</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Proteomics. 2009 Jun;9(11):2967-85</RefSource><PMID Version="1">19452453</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nature. 2009 Jun 25;459(7250):1071-8</RefSource><PMID Version="1">19553990</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Biochem Biophys Res Commun. 2009 Dec 18;390(3):357-62</RefSource><PMID Version="1">19800868</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2010 Jan;38(Database issue):D196-203</RefSource><PMID Version="1">19892828</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>BMC Bioinformatics. 2009;10:454</RefSource><PMID Version="1">20043823</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Cell Metab. 2010 Apr 7;11(4):245-7</RefSource><PMID Version="1">20374954</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Methods Mol Biol. 2011;696:291-303</RefSource><PMID Version="1">21063955</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2011 Jan;39(Database issue):D1130-3</RefSource><PMID Version="1">21036873</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2011 Jan;39(Database issue):D1123-9</RefSource><PMID Version="1">21045062</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2011 Jan;39(Database issue):D698-704</RefSource><PMID Version="1">21071413</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2011 Jul;39(Web Server issue):W29-37</RefSource><PMID Version="1">21593126</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Science. 2011 Jul 29;333(6042):601-7</RefSource><PMID Version="1">21798944</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2012 Jan;40(Database issue):D857-61</RefSource><PMID Version="1">22096227</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2012 Jan;40(Database issue):D841-6</RefSource><PMID Version="1">22121220</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Genomics Proteomics Bioinformatics. 2011 Oct;9(4-5):128-37</RefSource><PMID Version="1">22196356</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nat Genet. 2013 Jan;45(1):59-66</RefSource><PMID Version="1">23179022</PMID></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D032084" MajorTopicYN="N">Citrus sinensis</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018745" MajorTopicYN="N">Genome, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010937" MajorTopicYN="N">Plant Growth Regulators</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D060066" MajorTopicYN="Y">Protein Interaction Maps</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017423" MajorTopicYN="N">Sequence Analysis, RNA</DescriptorName></MeshHeading></MeshHeadingList><OtherID Source="NLM">PMC4236729</OtherID></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year><Month>7</Month><Day>16</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2014</Year><Month>7</Month><Day>24</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>8</Month><Day>6</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2014</Year><Month>8</Month><Day>6</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2015</Year><Month>5</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">25091279</ArticleId><ArticleId IdType="pii">s12870-014-0213-7</ArticleId><ArticleId IdType="doi">10.1186/s12870-014-0213-7</ArticleId><ArticleId IdType="pmc">PMC4236729</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><noCountry><name sortKey="Chang, Ji Wei" sort="Chang, Ji Wei" uniqKey="Chang J" first="Ji-Wei" last="Chang">Ji-Wei Chang</name><name sortKey="Chen, Dijun" sort="Chen, Dijun" uniqKey="Chen D" first="Dijun" last="Chen">Dijun Chen</name><name sortKey="Chen, Ling Ling" sort="Chen, Ling Ling" uniqKey="Chen L" first="Ling-Ling" last="Chen">Ling-Ling Chen</name><name sortKey="Deng, Xiu Xin" sort="Deng, Xiu Xin" uniqKey="Deng X" first="Xiu-Xin" last="Deng">Xiu-Xin Deng</name><name sortKey="Ding, Yu Duan" sort="Ding, Yu Duan" uniqKey="Ding Y" first="Yu-Duan" last="Ding">Yu-Duan Ding</name><name sortKey="Guo, Jing" sort="Guo, Jing" uniqKey="Guo J" first="Jing" last="Guo">Jing Guo</name><name sortKey="Li, Sen" sort="Li, Sen" uniqKey="Li S" first="Sen" last="Li">Sen Li</name><name sortKey="Xu, Qiang" sort="Xu, Qiang" uniqKey="Xu Q" first="Qiang" last="Xu">Qiang Xu</name></noCountry><country name="République populaire de Chine"><noRegion><name sortKey="Cheng, Yun Jiang" sort="Cheng, Yun Jiang" uniqKey="Cheng Y" first="Yun-Jiang" last="Cheng">Yun-Jiang Cheng</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/PubMed/Checkpoint
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000295 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PubMed/Checkpoint/biblio.hfd -nk 000295 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Bois
|area= OrangerV1
|flux= PubMed
|étape= Checkpoint
|type= RBID
|clé= pubmed:25091279
|texte= Prediction and functional analysis of the sweet orange protein-protein interaction network.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Checkpoint/RBID.i -Sk "pubmed:25091279" \
| HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Checkpoint/biblio.hfd \
| NlmPubMed2Wicri -a OrangerV1
| This area was generated with Dilib version V0.6.25. |  |