Fragile Sites of 'Valencia' Sweet Orange (Citrus sinensis) Chromosomes Are Related with Active 45s rDNA.
Identifieur interne : 000051 ( PubMed/Checkpoint ); précédent : 000050; suivant : 000052Fragile Sites of 'Valencia' Sweet Orange (Citrus sinensis) Chromosomes Are Related with Active 45s rDNA.
Auteurs : Hong Lan [République populaire de Chine] ; Chun-Li Chen [République populaire de Chine] ; Yin Miao [République populaire de Chine] ; Chang-Xiu Yu [République populaire de Chine] ; Wen-Wu Guo [République populaire de Chine] ; Qiang Xu [République populaire de Chine] ; Xiu-Xin Deng [République populaire de Chine]Source :
- PloS one [ 1932-6203 ] ; 2016.
English descriptors
- KwdEn :
- Chromosome Banding, Chromosome Fragile Sites (genetics), Chromosomes, Plant (genetics), Chromosomes, Plant (ultrastructure), Citrus sinensis (genetics), DNA, Plant (genetics), DNA, Ribosomal (genetics), In Situ Hybridization, Fluorescence, Meiosis, Meristem, Mitosis, Nucleolus Organizer Region (ultrastructure), Organoids, Ploidies, RNA, Plant (genetics), RNA, Ribosomal (genetics), Silver Staining, Telomere (ultrastructure), Translocation, Genetic.
- MESH :
- chemical , genetics : DNA, Plant, DNA, Ribosomal, RNA, Plant, RNA, Ribosomal.
- genetics : Chromosome Fragile Sites, Chromosomes, Plant, Citrus sinensis.
- ultrastructure : Chromosomes, Plant, Nucleolus Organizer Region, Telomere.
- Chromosome Banding, In Situ Hybridization, Fluorescence, Meiosis, Meristem, Mitosis, Organoids, Ploidies, Silver Staining, Translocation, Genetic.
Abstract
Citrus sinensis chromosomes present a morphological differentiation of bands after staining by the fluorochromes CMA and DAPI, but there is still little information on its chromosomal characteristics. In this study, the chromosomes in 'Valencia' C. sinensis were analyzed by fluorescence in situ hybridization (FISH) using telomere DNA and the 45S rDNA gene as probes combining CMA/DAPI staining, which showed that there were two fragile sites in sweet orange chromosomes co-localizing at distended 45S rDNA regions, one proximally locating on B-type chromosome and the other subterminally locating on D-type chromosome. While the chromosomal CMA banding and 45S rDNA FISH mapping in the doubled haploid line of 'Valencia' C. sinensis indicated six 45S rDNA regions, four were identified as fragile sites as doubled comparing its parental line, which confirmed the cytological heterozygosity and chromosomal heteromorphisms in sweet orange. Furthermore, Ag-NOR identified two distended 45S rDNA regions to be active nucleolar organizing regions (NORs) in diploid 'Valencia' C. sinensis. The occurrence of quadrivalent in meiosis of pollen mother cells (PMCs) in 'Valencia' sweet orange further confirmed it was a chromosomal reciprocal translocation line. We speculated this chromosome translocation was probably related to fragile sites. Our data provide insights into the chromosomal characteristics of the fragile sites in 'Valencia' sweet orange and are expected to facilitate the further investigation of the possible functions of fragile sites.
DOI: 10.1371/journal.pone.0151512
PubMed: 26977938
Affiliations:
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pubmed:26977938Le document en format XML
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<front><div type="abstract" xml:lang="en">Citrus sinensis chromosomes present a morphological differentiation of bands after staining by the fluorochromes CMA and DAPI, but there is still little information on its chromosomal characteristics. In this study, the chromosomes in 'Valencia' C. sinensis were analyzed by fluorescence in situ hybridization (FISH) using telomere DNA and the 45S rDNA gene as probes combining CMA/DAPI staining, which showed that there were two fragile sites in sweet orange chromosomes co-localizing at distended 45S rDNA regions, one proximally locating on B-type chromosome and the other subterminally locating on D-type chromosome. While the chromosomal CMA banding and 45S rDNA FISH mapping in the doubled haploid line of 'Valencia' C. sinensis indicated six 45S rDNA regions, four were identified as fragile sites as doubled comparing its parental line, which confirmed the cytological heterozygosity and chromosomal heteromorphisms in sweet orange. Furthermore, Ag-NOR identified two distended 45S rDNA regions to be active nucleolar organizing regions (NORs) in diploid 'Valencia' C. sinensis. The occurrence of quadrivalent in meiosis of pollen mother cells (PMCs) in 'Valencia' sweet orange further confirmed it was a chromosomal reciprocal translocation line. We speculated this chromosome translocation was probably related to fragile sites. Our data provide insights into the chromosomal characteristics of the fragile sites in 'Valencia' sweet orange and are expected to facilitate the further investigation of the possible functions of fragile sites.</div>
</front>
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<Abstract><AbstractText>Citrus sinensis chromosomes present a morphological differentiation of bands after staining by the fluorochromes CMA and DAPI, but there is still little information on its chromosomal characteristics. In this study, the chromosomes in 'Valencia' C. sinensis were analyzed by fluorescence in situ hybridization (FISH) using telomere DNA and the 45S rDNA gene as probes combining CMA/DAPI staining, which showed that there were two fragile sites in sweet orange chromosomes co-localizing at distended 45S rDNA regions, one proximally locating on B-type chromosome and the other subterminally locating on D-type chromosome. While the chromosomal CMA banding and 45S rDNA FISH mapping in the doubled haploid line of 'Valencia' C. sinensis indicated six 45S rDNA regions, four were identified as fragile sites as doubled comparing its parental line, which confirmed the cytological heterozygosity and chromosomal heteromorphisms in sweet orange. Furthermore, Ag-NOR identified two distended 45S rDNA regions to be active nucleolar organizing regions (NORs) in diploid 'Valencia' C. sinensis. The occurrence of quadrivalent in meiosis of pollen mother cells (PMCs) in 'Valencia' sweet orange further confirmed it was a chromosomal reciprocal translocation line. We speculated this chromosome translocation was probably related to fragile sites. Our data provide insights into the chromosomal characteristics of the fragile sites in 'Valencia' sweet orange and are expected to facilitate the further investigation of the possible functions of fragile sites.</AbstractText>
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<MeshHeadingList><MeshHeading><DescriptorName UI="D002871" MajorTopicYN="N">Chromosome Banding</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D043283" MajorTopicYN="N">Chromosome Fragile Sites</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D032461" MajorTopicYN="N">Chromosomes, Plant</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000648" MajorTopicYN="Y">ultrastructure</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D032084" MajorTopicYN="N">Citrus sinensis</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018744" MajorTopicYN="N">DNA, Plant</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D004275" MajorTopicYN="N">DNA, Ribosomal</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017404" MajorTopicYN="N">In Situ Hybridization, Fluorescence</DescriptorName>
</MeshHeading>
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</MeshHeading>
<MeshHeading><DescriptorName UI="D018519" MajorTopicYN="N">Meristem</DescriptorName>
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</MeshHeading>
<MeshHeading><DescriptorName UI="D009697" MajorTopicYN="N">Nucleolus Organizer Region</DescriptorName>
<QualifierName UI="Q000648" MajorTopicYN="N">ultrastructure</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D009940" MajorTopicYN="N">Organoids</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D011003" MajorTopicYN="N">Ploidies</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018749" MajorTopicYN="N">RNA, Plant</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012335" MajorTopicYN="N">RNA, Ribosomal</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016622" MajorTopicYN="N">Silver Staining</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016615" MajorTopicYN="N">Telomere</DescriptorName>
<QualifierName UI="Q000648" MajorTopicYN="N">ultrastructure</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D014178" MajorTopicYN="N">Translocation, Genetic</DescriptorName>
</MeshHeading>
</MeshHeadingList>
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<Month>12</Month>
<Day>31</Day>
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<PubMedPubDate PubStatus="accepted"><Year>2016</Year>
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<affiliations><list><country><li>République populaire de Chine</li>
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<tree><country name="République populaire de Chine"><noRegion><name sortKey="Lan, Hong" sort="Lan, Hong" uniqKey="Lan H" first="Hong" last="Lan">Hong Lan</name>
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<name sortKey="Chen, Chun Li" sort="Chen, Chun Li" uniqKey="Chen C" first="Chun-Li" last="Chen">Chun-Li Chen</name>
<name sortKey="Deng, Xiu Xin" sort="Deng, Xiu Xin" uniqKey="Deng X" first="Xiu-Xin" last="Deng">Xiu-Xin Deng</name>
<name sortKey="Guo, Wen Wu" sort="Guo, Wen Wu" uniqKey="Guo W" first="Wen-Wu" last="Guo">Wen-Wu Guo</name>
<name sortKey="Miao, Yin" sort="Miao, Yin" uniqKey="Miao Y" first="Yin" last="Miao">Yin Miao</name>
<name sortKey="Xu, Qiang" sort="Xu, Qiang" uniqKey="Xu Q" first="Qiang" last="Xu">Qiang Xu</name>
<name sortKey="Yu, Chang Xiu" sort="Yu, Chang Xiu" uniqKey="Yu C" first="Chang-Xiu" last="Yu">Chang-Xiu Yu</name>
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