Proteomic analysis highlights the role of detoxification pathways in increased tolerance to Huanglongbing disease
Identifieur interne : 000646 ( Pmc/Curation ); précédent : 000645; suivant : 000647Proteomic analysis highlights the role of detoxification pathways in increased tolerance to Huanglongbing disease
Auteurs : Federico Martinelli [Italie] ; Russell L. Reagan [États-Unis] ; David Dolan [États-Unis] ; Veronica Fileccia [Italie] ; Abhaya M. Dandekar [États-Unis]Source :
- BMC Plant Biology [ 1471-2229 ] ; 2016.
Abstract
Huanglongbing (HLB) disease is still the greatest threat to citriculture worldwide. Although there is not any resistance source in the
In this work we have conducted a proteomic analysis of mature leaves of two
Upregulation of proteins involved in radical ion detoxification should be considered as an important mechanism of increased tolerance to HLB.
The online version of this article (doi:10.1186/s12870-016-0858-5) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1186/s12870-016-0858-5
PubMed: 27465111
PubMed Central: 4963945
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Proteomic analysis highlights the role of detoxification pathways in increased tolerance to Huanglongbing disease</title><author><name sortKey="Martinelli, Federico" sort="Martinelli, Federico" uniqKey="Martinelli F" first="Federico" last="Martinelli">Federico Martinelli</name><affiliation wicri:level="1"><nlm:aff id="Aff1">Department of Agricultural and Forest Sciences, University of Palermo, viale delle scienze ed. 4, 90128 Palermo, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Agricultural and Forest Sciences, University of Palermo, viale delle scienze ed. 4, 90128 Palermo</wicri:regionArea></affiliation></author><author><name sortKey="Reagan, Russell L" sort="Reagan, Russell L" uniqKey="Reagan R" first="Russell L." last="Reagan">Russell L. Reagan</name><affiliation wicri:level="2"><nlm:aff id="Aff2">Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis, CA USA</nlm:aff><country>États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis</wicri:cityArea></affiliation></author><author><name sortKey="Dolan, David" sort="Dolan, David" uniqKey="Dolan D" first="David" last="Dolan">David Dolan</name><affiliation wicri:level="2"><nlm:aff id="Aff2">Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis, CA USA</nlm:aff><country>États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis</wicri:cityArea></affiliation></author><author><name sortKey="Fileccia, Veronica" sort="Fileccia, Veronica" uniqKey="Fileccia V" first="Veronica" last="Fileccia">Veronica Fileccia</name><affiliation wicri:level="1"><nlm:aff id="Aff1">Department of Agricultural and Forest Sciences, University of Palermo, viale delle scienze ed. 4, 90128 Palermo, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Agricultural and Forest Sciences, University of Palermo, viale delle scienze ed. 4, 90128 Palermo</wicri:regionArea></affiliation></author><author><name sortKey="Dandekar, Abhaya M" sort="Dandekar, Abhaya M" uniqKey="Dandekar A" first="Abhaya M." last="Dandekar">Abhaya M. Dandekar</name><affiliation wicri:level="2"><nlm:aff id="Aff2">Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis, CA USA</nlm:aff><country>États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis</wicri:cityArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">27465111</idno><idno type="pmc">4963945</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4963945</idno><idno type="RBID">PMC:4963945</idno><idno type="doi">10.1186/s12870-016-0858-5</idno><date when="2016">2016</date><idno type="wicri:Area/Pmc/Corpus">000647</idno><idno type="wicri:Area/Pmc/Curation">000646</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Proteomic analysis highlights the role of detoxification pathways in increased tolerance to Huanglongbing disease</title><author><name sortKey="Martinelli, Federico" sort="Martinelli, Federico" uniqKey="Martinelli F" first="Federico" last="Martinelli">Federico Martinelli</name><affiliation wicri:level="1"><nlm:aff id="Aff1">Department of Agricultural and Forest Sciences, University of Palermo, viale delle scienze ed. 4, 90128 Palermo, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Agricultural and Forest Sciences, University of Palermo, viale delle scienze ed. 4, 90128 Palermo</wicri:regionArea></affiliation></author><author><name sortKey="Reagan, Russell L" sort="Reagan, Russell L" uniqKey="Reagan R" first="Russell L." last="Reagan">Russell L. Reagan</name><affiliation wicri:level="2"><nlm:aff id="Aff2">Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis, CA USA</nlm:aff><country>États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis</wicri:cityArea></affiliation></author><author><name sortKey="Dolan, David" sort="Dolan, David" uniqKey="Dolan D" first="David" last="Dolan">David Dolan</name><affiliation wicri:level="2"><nlm:aff id="Aff2">Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis, CA USA</nlm:aff><country>États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis</wicri:cityArea></affiliation></author><author><name sortKey="Fileccia, Veronica" sort="Fileccia, Veronica" uniqKey="Fileccia V" first="Veronica" last="Fileccia">Veronica Fileccia</name><affiliation wicri:level="1"><nlm:aff id="Aff1">Department of Agricultural and Forest Sciences, University of Palermo, viale delle scienze ed. 4, 90128 Palermo, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Agricultural and Forest Sciences, University of Palermo, viale delle scienze ed. 4, 90128 Palermo</wicri:regionArea></affiliation></author><author><name sortKey="Dandekar, Abhaya M" sort="Dandekar, Abhaya M" uniqKey="Dandekar A" first="Abhaya M." last="Dandekar">Abhaya M. Dandekar</name><affiliation wicri:level="2"><nlm:aff id="Aff2">Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis, CA USA</nlm:aff><country>États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis</wicri:cityArea></affiliation></author></analytic><series><title level="j">BMC Plant Biology</title><idno type="eISSN">1471-2229</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><sec><title>Background</title><p>Huanglongbing (HLB) disease is still the greatest threat to citriculture worldwide. Although there is not any resistance source in the <italic>Citrus</italic> germplasm, a certain level of moderated tolerance is present. A large-scale analysis of proteomic responses of <italic>Citrus</italic> may help: 1) clarifying physiological and molecular effects of disease progression, 2) validating previous data at transcriptomic level, and 3) identifying biomarkers for development of early diagnostics, short-term therapeutics and long-term genetic resistance.</p></sec><sec><title>Results</title><p>In this work we have conducted a proteomic analysis of mature leaves of two <italic>Citrus</italic> genotypes with well-known differing tolerances to HLB: Navel orange (highly susceptible) and Volkameriana (moderately tolerant). Pathway enrichment analysis showed that amino acid degradation processes occurred to a larger degree in the Navel orange. No clear differences between the two genotypes were observed for primary metabolic pathways. The most important finding was that four glutathione-S-transferases were upregulated in Volkameriana and not in Navel orange. These proteins are involved in radical ion detoxification.</p></sec><sec><title>Conclusions</title><p>Upregulation of proteins involved in radical ion detoxification should be considered as an important mechanism of increased tolerance to HLB.</p></sec><sec><title>Electronic supplementary material</title><p>The online version of this article (doi:10.1186/s12870-016-0858-5) contains supplementary material, which is available to authorized users.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Bove, Jm" uniqKey="Bove J">JM Bové</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Folimonova, Sy" uniqKey="Folimonova S">SY Folimonova</name></author><author><name sortKey="Achor, D" uniqKey="Achor D">D Achor</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jagoueix, S" uniqKey="Jagoueix S">S Jagoueix</name></author><author><name sortKey="Bove, Jm" uniqKey="Bove 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article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">BMC Plant Biol</journal-id><journal-id journal-id-type="iso-abbrev">BMC Plant Biol</journal-id><journal-title-group><journal-title>BMC Plant Biology</journal-title></journal-title-group><issn pub-type="epub">1471-2229</issn><publisher><publisher-name>BioMed Central</publisher-name><publisher-loc>London</publisher-loc></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">27465111</article-id><article-id pub-id-type="pmc">4963945</article-id><article-id pub-id-type="publisher-id">858</article-id><article-id pub-id-type="doi">10.1186/s12870-016-0858-5</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title>Proteomic analysis highlights the role of detoxification pathways in increased tolerance to Huanglongbing disease</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Martinelli</surname><given-names>Federico</given-names></name><address><email>federico.martinelli@unipa.it</email></address><xref ref-type="aff" rid="Aff1">1</xref></contrib><contrib contrib-type="author"><name><surname>Reagan</surname><given-names>Russell L.</given-names></name><address><email>russell.reagan@gmail.com</email></address><xref ref-type="aff" rid="Aff2">2</xref></contrib><contrib contrib-type="author"><name><surname>Dolan</surname><given-names>David</given-names></name><address><email>david.dolander@gmail.com</email></address><xref ref-type="aff" rid="Aff2">2</xref></contrib><contrib contrib-type="author"><name><surname>Fileccia</surname><given-names>Veronica</given-names></name><address><email>veronica.fileccia@unipa.it</email></address><xref ref-type="aff" rid="Aff1">1</xref></contrib><contrib contrib-type="author" corresp="yes"><name><surname>Dandekar</surname><given-names>Abhaya M.</given-names></name><address><phone>+15307527784</phone><email>amdandekar@ucdavis.edu</email></address><xref ref-type="aff" rid="Aff2">2</xref></contrib><aff id="Aff1"><label>1</label>Department of Agricultural and Forest Sciences, University of Palermo, viale delle scienze ed. 4, 90128 Palermo, Italy</aff><aff id="Aff2"><label>2</label>Plant Sciences Department, University of California, One Shields Avenue, 95616 Davis, CA USA</aff></contrib-group><pub-date pub-type="epub"><day>28</day><month>7</month><year>2016</year></pub-date><pub-date pub-type="pmc-release"><day>28</day><month>7</month><year>2016</year></pub-date><pub-date pub-type="collection"><year>2016</year></pub-date><volume>16</volume><elocation-id>167</elocation-id><history><date date-type="received"><day>25</day><month>2</month><year>2016</year></date><date date-type="accepted"><day>20</day><month>7</month><year>2016</year></date></history><permissions><copyright-statement>© The Author(s). 2016</copyright-statement><license license-type="OpenAccess"><license-p><bold>Open Access</bold>This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (<ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/">http://creativecommons.org/licenses/by/4.0/</ext-link>), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (<ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/publicdomain/zero/1.0/">http://creativecommons.org/publicdomain/zero/1.0/</ext-link>) applies to the data made available in this article, unless otherwise stated.</license-p></license></permissions><abstract id="Abs1"><sec><title>Background</title><p>Huanglongbing (HLB) disease is still the greatest threat to citriculture worldwide. Although there is not any resistance source in the <italic>Citrus</italic> germplasm, a certain level of moderated tolerance is present. A large-scale analysis of proteomic responses of <italic>Citrus</italic> may help: 1) clarifying physiological and molecular effects of disease progression, 2) validating previous data at transcriptomic level, and 3) identifying biomarkers for development of early diagnostics, short-term therapeutics and long-term genetic resistance.</p></sec><sec><title>Results</title><p>In this work we have conducted a proteomic analysis of mature leaves of two <italic>Citrus</italic> genotypes with well-known differing tolerances to HLB: Navel orange (highly susceptible) and Volkameriana (moderately tolerant). Pathway enrichment analysis showed that amino acid degradation processes occurred to a larger degree in the Navel orange. No clear differences between the two genotypes were observed for primary metabolic pathways. The most important finding was that four glutathione-S-transferases were upregulated in Volkameriana and not in Navel orange. These proteins are involved in radical ion detoxification.</p></sec><sec><title>Conclusions</title><p>Upregulation of proteins involved in radical ion detoxification should be considered as an important mechanism of increased tolerance to HLB.</p></sec><sec><title>Electronic supplementary material</title><p>The online version of this article (doi:10.1186/s12870-016-0858-5) contains supplementary material, which is available to authorized users.</p></sec></abstract><kwd-group xml:lang="en"><title>Keywords</title><kwd><italic>Citrus</italic></kwd><kwd>Huanglongbing</kwd><kwd><italic>Candidatus liberibacter</italic></kwd><kwd>iTRAQ</kwd><kwd>Proteome</kwd><kwd>Proteomic</kwd></kwd-group><funding-group><award-group><funding-source><institution-wrap><institution-id institution-id-type="FundRef">http://dx.doi.org/http://dx.doi.org/10.13039/100007565</institution-id><institution>Citrus Research and Development Foundation</institution></institution-wrap></funding-source></award-group></funding-group><custom-meta-group><custom-meta><meta-name>issue-copyright-statement</meta-name><meta-value>© The Author(s) 2016</meta-value></custom-meta></custom-meta-group></article-meta></front></pmc></record>Pour manipuler ce document sous Unix (Dilib)
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