Links to Exploration step
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genetic Variation of <italic>Citrus Tristeza Virus</italic> Isolates from California and Spain: Evidence for Mixed Infections and Recombination</title><author><name sortKey="Rubio, Luis" sort="Rubio, Luis" uniqKey="Rubio L" first="Luis" last="Rubio">Luis Rubio</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Ayll N, Maria Angeles" sort="Ayll N, Maria Angeles" uniqKey="Ayll N M" first="María Angeles" last="Ayll N">María Angeles Ayll N</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Kong, Ping" sort="Kong, Ping" uniqKey="Kong P" first="Ping" last="Kong">Ping Kong</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Fernandez, Andres" sort="Fernandez, Andres" uniqKey="Fernandez A" first="Andres" last="Fernández">Andres Fernández</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Polek, Marylou" sort="Polek, Marylou" uniqKey="Polek M" first="Marylou" last="Polek">Marylou Polek</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Guerri, Jose" sort="Guerri, Jose" uniqKey="Guerri J" first="José" last="Guerri">José Guerri</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Moreno, Pedro" sort="Moreno, Pedro" uniqKey="Moreno P" first="Pedro" last="Moreno">Pedro Moreno</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Falk, Bryce W" sort="Falk, Bryce W" uniqKey="Falk B" first="Bryce W." last="Falk">Bryce W. Falk</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">11483750</idno><idno type="pmc">115049</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC115049</idno><idno type="RBID">PMC:115049</idno><idno type="doi">10.1128/JVI.75.17.8054-8062.2001</idno><date when="2001">2001</date><idno type="wicri:Area/Pmc/Corpus">000523</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genetic Variation of <italic>Citrus Tristeza Virus</italic> Isolates from California and Spain: Evidence for Mixed Infections and Recombination</title><author><name sortKey="Rubio, Luis" sort="Rubio, Luis" uniqKey="Rubio L" first="Luis" last="Rubio">Luis Rubio</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Ayll N, Maria Angeles" sort="Ayll N, Maria Angeles" uniqKey="Ayll N M" first="María Angeles" last="Ayll N">María Angeles Ayll N</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Kong, Ping" sort="Kong, Ping" uniqKey="Kong P" first="Ping" last="Kong">Ping Kong</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Fernandez, Andres" sort="Fernandez, Andres" uniqKey="Fernandez A" first="Andres" last="Fernández">Andres Fernández</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Polek, Marylou" sort="Polek, Marylou" uniqKey="Polek M" first="Marylou" last="Polek">Marylou Polek</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Guerri, Jose" sort="Guerri, Jose" uniqKey="Guerri J" first="José" last="Guerri">José Guerri</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Moreno, Pedro" sort="Moreno, Pedro" uniqKey="Moreno P" first="Pedro" last="Moreno">Pedro Moreno</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author><author><name sortKey="Falk, Bryce W" sort="Falk, Bryce W" uniqKey="Falk B" first="Bryce W." last="Falk">Bryce W. Falk</name><affiliation><nlm:aff id="N0x8c38b68.0x8b6d5c0"></nlm:aff></affiliation></author></analytic><series><title level="j">Journal of Virology</title><idno type="ISSN">0022-538X</idno><idno type="eISSN">1098-5514</idno><imprint><date when="2001">2001</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>We examined the population structure and genetic variation of four genomic regions within and between 30 <italic>Citrus tristeza virus</italic> (CTV) isolates from Spain and California. Our analyses showed that most isolates contained a population of sequence variants, with one being predominant. Four isolates showed two major sequence variants in some genomic regions. The two major variants of three of these isolates showed very low nucleotide identity to each other but were very similar to those of other isolates, suggesting the possibility of mixed infections with two divergent isolates. Incongruencies of phylogenetic relationships in the different genomic regions and statistical analyses suggested that the genomes of some CTV sequence variants originated by recombination events between diverged sequence variants. No correlation was observed between geographic origin and nucleotide distance, and thus from a genetic view, the Spanish and Californian isolates analyzed here could be considered members of the same population.</p></div></front></TEI><pmc article-type="research-article"><pmc-comment>The publisher of this article does not allow downloading of the full text in XML form.</pmc-comment>
<front><journal-meta><journal-id journal-id-type="nlm-ta">J Virol</journal-id><journal-id journal-id-type="publisher-id">J VIROL</journal-id><journal-title>Journal of Virology</journal-title><issn pub-type="ppub">0022-538X</issn><issn pub-type="epub">1098-5514</issn><publisher><publisher-name>American Society for Microbiology</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">11483750</article-id><article-id pub-id-type="pmc">115049</article-id><article-id pub-id-type="publisher-id">0461</article-id><article-id pub-id-type="doi">10.1128/JVI.75.17.8054-8062.2001</article-id><article-categories><subj-group subj-group-type="heading"><subject>Recombination and Evolution</subject></subj-group></article-categories><title-group><article-title>Genetic Variation of <italic>Citrus Tristeza Virus</italic> Isolates from California and Spain: Evidence for Mixed Infections and Recombination</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Rubio</surname><given-names>Luis</given-names></name><xref ref-type="aff" rid="N0x8c38b68.0x8b6d5c0">1</xref></contrib><contrib contrib-type="author"><name><surname>Ayllón</surname><given-names>María Angeles</given-names></name><xref ref-type="aff" rid="N0x8c38b68.0x8b6d5c0">2</xref><xref ref-type="author-notes" rid="FN151">†</xref></contrib><contrib contrib-type="author"><name><surname>Kong</surname><given-names>Ping</given-names></name><xref ref-type="aff" rid="N0x8c38b68.0x8b6d5c0">1</xref></contrib><contrib contrib-type="author"><name><surname>Fernández</surname><given-names>Andres</given-names></name><xref ref-type="aff" rid="N0x8c38b68.0x8b6d5c0">2</xref></contrib><contrib contrib-type="author"><name><surname>Polek</surname><given-names>MaryLou</given-names></name><xref ref-type="aff" rid="N0x8c38b68.0x8b6d5c0">3</xref></contrib><contrib contrib-type="author"><name><surname>Guerri</surname><given-names>José</given-names></name><xref ref-type="aff" rid="N0x8c38b68.0x8b6d5c0">2</xref></contrib><contrib contrib-type="author"><name><surname>Moreno</surname><given-names>Pedro</given-names></name><xref ref-type="aff" rid="N0x8c38b68.0x8b6d5c0">2</xref></contrib><contrib contrib-type="author"><name><surname>Falk</surname><given-names>Bryce W.</given-names></name><xref ref-type="aff" rid="N0x8c38b68.0x8b6d5c0">1</xref><xref ref-type="author-notes" rid="FN150">*</xref></contrib></contrib-group><aff id="N0x8c38b68.0x8b6d5c0"> Plant Pathology Department, University of California, Davis, California 95616<sup>1</sup>; Instituto Valenciano de Investigaciones Agrarias, Valencia, Spain<sup>2</sup>; and Central California Tristeza Eradication Agency, Tulare, California 93224<sup>3</sup></aff><author-notes><fn id="FN150"><label>*</label><p>Corresponding author. Mailing address: Department of Plant Pathology, One Shields Ave., University of California–Davis, Davis, CA 95616. Phone: (530) 752-0302. Fax: (530) 752-5674. E-mail: <email>bwfalk@ucdavis.edu</email>.</p></fn><fn id="FN151"><label>†</label><p>Present address: Citrus Research and Education Center, Department of Plant Pathology, University of Florida, Lake Alfred, FL 33850.</p></fn></author-notes><pub-date pub-type="ppub"><month>9</month><year>2001</year></pub-date><volume>75</volume><issue>17</issue><fpage>8054</fpage><lpage>8062</lpage><history><date date-type="received"><day>9</day><month>3</month><year>2001</year></date><date date-type="accepted"><day>18</day><month>5</month><year>2001</year></date></history><copyright-statement>Copyright © 2001, American Society for Microbiology</copyright-statement><copyright-year>2001</copyright-year><abstract><p>We examined the population structure and genetic variation of four genomic regions within and between 30 <italic>Citrus tristeza virus</italic> (CTV) isolates from Spain and California. Our analyses showed that most isolates contained a population of sequence variants, with one being predominant. Four isolates showed two major sequence variants in some genomic regions. The two major variants of three of these isolates showed very low nucleotide identity to each other but were very similar to those of other isolates, suggesting the possibility of mixed infections with two divergent isolates. Incongruencies of phylogenetic relationships in the different genomic regions and statistical analyses suggested that the genomes of some CTV sequence variants originated by recombination events between diverged sequence variants. No correlation was observed between geographic origin and nucleotide distance, and thus from a genetic view, the Spanish and Californian isolates analyzed here could be considered members of the same population.</p></abstract></article-meta></front></pmc></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/Pmc/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000523 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Pmc/Corpus/biblio.hfd -nk 000523 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Bois
|area= OrangerV1
|flux= Pmc
|étape= Corpus
|type= RBID
|clé=
|texte=
}}
| This area was generated with Dilib version V0.6.25. |  |