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Species and ecological diversity within the Cladosporium cladosporioides complex (Davidiellaceae, Capnodiales)

Identifieur interne : 000F19 ( Pmc/Checkpoint ); précédent : 000F18; suivant : 000F20

Species and ecological diversity within the Cladosporium cladosporioides complex (Davidiellaceae, Capnodiales)

Auteurs : K. Bensch ; J. Z. Groenewald ; J. Dijksterhuis ; M. Starink-Willemse ; B. Andersen ; B. A. Summerell ; H.-D. Shin ; F. M. Dugan ; H.-J. Schroers ; U. Braun ; P. W. Crous

Source :

RBID : PMC:2945380

Abstract

The genus Cladosporium is one of the largest genera of dematiaceous hyphomycetes, and is characterised by a coronate scar structure, conidia in acropetal chains and Davidiella teleomorphs. Based on morphology and DNA phylogeny, the species complexes of C. herbarumand C. sphaerospermum have been resolved, resulting in the elucidation of numerous new taxa. In the present study, more than 200 isolates belonging to the C. cladosporioides complex were examined and phylogenetically analysed on the basis of DNA sequences of the nuclear ribosomal RNA gene operon, including the internal transcribed spacer regions ITS1 and ITS2, the 5.8S nrDNA, as well as partial actin and translation elongation factor 1-α gene sequences. For the saprobic, widely distributed species Cladosporium cladosporioides, both a neotype and epitype are designated in order to specify a well established circumscription and concept of this species. Cladosporium tenuissimum and C. oxysporum, two saprobes abundant in the tropics, are epitypified and shown to be allied to, but distinct from C. cladosporioides. Twenty-two species are newly described on the basis of phylogenetic characters and cryptic morphological differences. The most important phenotypic characters for distinguishing species within the C. cladosporioidescomplex, which represents a monophyletic subclade within the genus, are shape, width, length, septation and surface ornamentation of conidia and conidiophores; length and branching patterns of conidial chains and hyphal shape, width and arrangement. Many of the treated species, e.g., C. acalyphae, C. angustisporum, C. australiense, C. basiinflatum, C. chalastosporoides, C. colocasiae, C. cucumerinum, C. exasperatum, C. exile, C. flabelliforme, C. gamsianum, and C. globisporumare currently known only from specific hosts, or have a restricted geographical distribution. A key to all species recognised within the C. cladosporioides complex is provided.


Url:
DOI: 10.3114/sim.2010.67.01
PubMed: 20877444
PubMed Central: 2945380


Affiliations:


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PMC:2945380

Le document en format XML

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<title xml:lang="en" level="a" type="main">Species and ecological diversity within the
<italic>Cladosporium cladosporioide</italic>
s complex (
<italic>Davidiellaceae</italic>
,
<italic>Capnodiales</italic>
)</title>
<author>
<name sortKey="Bensch, K" sort="Bensch, K" uniqKey="Bensch K" first="K." last="Bensch">K. Bensch</name>
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<nlm:aff id="aff1">
<italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
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<affiliation>
<nlm:aff id="aff2">
<italic>Botanische Staatssammlung München, Menzinger Strasse 67, D-80638 München, Germany</italic>
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<affiliation>
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<italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
<author>
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<italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
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<name sortKey="Summerell, B A" sort="Summerell, B A" uniqKey="Summerell B" first="B. A." last="Summerell">B. A. Summerell</name>
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<name sortKey="Braun, U" sort="Braun, U" uniqKey="Braun U" first="U." last="Braun">U. Braun</name>
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<div type="abstract" xml:lang="en">
<p>The genus
<italic>Cladosporium</italic>
is one of the largest genera of dematiaceous hyphomycetes, and is characterised by a coronate scar structure, conidia in acropetal chains and
<italic>Davidiella</italic>
teleomorphs. Based on morphology and DNA phylogeny, the species complexes of
<italic>C. herbarum</italic>
and
<italic>C. sphaerospermum</italic>
have been resolved, resulting in the elucidation of numerous new taxa. In the present study, more than 200 isolates belonging to the
<italic>C. cladosporioides</italic>
complex were examined and phylogenetically analysed on the basis of DNA sequences of the nuclear ribosomal RNA gene operon, including the internal transcribed spacer regions ITS1 and ITS2, the 5.8S nrDNA, as well as partial actin and translation elongation factor 1-α gene sequences. For the saprobic, widely distributed species
<italic>Cladosporium cladosporioides,</italic>
both a neotype and epitype are designated in order to specify a well established circumscription and concept of this species.
<italic>Cladosporium tenuissimum</italic>
and
<italic>C. oxysporum</italic>
, two saprobes abundant in the tropics, are epitypified and shown to be allied to, but distinct from
<italic>C. cladosporioides</italic>
. Twenty-two species are newly described on the basis of phylogenetic characters and cryptic morphological differences. The most important phenotypic characters for distinguishing species within the
<italic>C. cladosporioides</italic>
complex, which represents a monophyletic subclade within the genus, are shape, width, length, septation and surface ornamentation of conidia and conidiophores; length and branching patterns of conidial chains and hyphal shape, width and arrangement. Many of the treated species,
<italic>e.g.</italic>
,
<italic>C. acalyphae</italic>
,
<italic>C. angustisporum</italic>
,
<italic>C. australiense</italic>
,
<italic>C. basiinflatum</italic>
,
<italic>C. chalastosporoides</italic>
,
<italic>C. colocasiae</italic>
,
<italic>C. cucumerinum, C. exasperatum</italic>
,
<italic>C. exile</italic>
,
<italic>C. flabelliforme</italic>
,
<italic>C. gamsianum</italic>
, and
<italic>C. globisporum</italic>
are currently known only from specific hosts, or have a restricted geographical distribution. A key to all species recognised within the
<italic>C. cladosporioides</italic>
complex is provided.</p>
</div>
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<journal-id journal-id-type="publisher-id">simycol</journal-id>
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<journal-title>Studies in Mycology</journal-title>
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<issn pub-type="epub">1872-9797</issn>
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<subject>Articles</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>Species and ecological diversity within the
<italic>Cladosporium cladosporioide</italic>
s complex (
<italic>Davidiellaceae</italic>
,
<italic>Capnodiales</italic>
)</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Bensch</surname>
<given-names>K.</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
<xref ref-type="aff" rid="aff2">2</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Groenewald</surname>
<given-names>J.Z.</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Dijksterhuis</surname>
<given-names>J.</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Starink-Willemse</surname>
<given-names>M.</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Andersen</surname>
<given-names>B.</given-names>
</name>
<xref ref-type="aff" rid="aff3">3</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Summerell</surname>
<given-names>B.A.</given-names>
</name>
<xref ref-type="aff" rid="aff4">4</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Shin</surname>
<given-names>H.-D.</given-names>
</name>
<xref ref-type="aff" rid="aff5">5</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Dugan</surname>
<given-names>F.M.</given-names>
</name>
<xref ref-type="aff" rid="aff6">6</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Schroers</surname>
<given-names>H.-J.</given-names>
</name>
<xref ref-type="aff" rid="aff7">7</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Braun</surname>
<given-names>U.</given-names>
</name>
<xref ref-type="aff" rid="aff8">8</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Crous</surname>
<given-names>P.W.</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
<xref ref-type="aff" rid="aff9">9</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<label>1</label>
<italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</aff>
<aff id="aff2">
<label>2</label>
<italic>Botanische Staatssammlung München, Menzinger Strasse 67, D-80638 München, Germany</italic>
</aff>
<aff id="aff3">
<label>3</label>
<italic>DTU Systems Biology, Søltofts Plads, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark</italic>
</aff>
<aff id="aff4">
<label>4</label>
<italic>Royal Botanic Gardens and Domain Trust, Mrs. Macquaries Road, Sydney, NSW 2000, Australia</italic>
</aff>
<aff id="aff5">
<label>5</label>
<italic>Division of Environmental Science & Ecological Engineering, Korea University, Seoul 136-701, South Korea</italic>
</aff>
<aff id="aff6">
<label>6</label>
<italic>USDA-ARS Western Regional Plant Introduction Station and Department of Plant Pathology, Washington State University, Pullman, WA 99164, U.S.A.</italic>
</aff>
<aff id="aff7">
<label>7</label>
<italic>Agricultural Institute of Slovenia, Hacquetova 17, p.p. 2553, 1001 Ljubljana, Slovenia</italic>
</aff>
<aff id="aff8">
<label>8</label>
<italic>Martin-Luther-Universität, Institut für Biologie, Bereich Geobotanik und Botanischer Garten, Herbarium, Neuwerk 21, D-06099 Halle (Saale), Germany</italic>
</aff>
<aff id="aff9">
<label>9</label>
<italic>Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands.</italic>
</aff>
<author-notes>
<corresp> *
<italic>Correspondence</italic>
: Konstanze Bensch,
<email>konstanze.schubert@gmx.de</email>
</corresp>
</author-notes>
<pub-date pub-type="ppub">
<year>2010</year>
</pub-date>
<volume>67</volume>
<issue-title>
<bold>Species and ecological diversity within the
<italic>Cladosporium cladosporioides</italic>
complex (
<italic>Davidiellaceae</italic>
,
<italic>Capnodiales</italic>
)</bold>
</issue-title>
<fpage>1</fpage>
<lpage>94</lpage>
<permissions>
<copyright-statement>Copyright © Copyright 2010 CBS-KNAW Fungal Biodiversity Centre</copyright-statement>
<copyright-year>2010</copyright-year>
<license>
<license-p>You are free to share - to copy, distribute and transmit the work, under the following conditions:</license-p>
<license-p>
<bold>Attribution:</bold>
  You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work).</license-p>
<license-p>
<bold>Non-commercial:</bold>
  You may not use this work for commercial purposes.</license-p>
<license-p>
<bold>No derivative works:</bold>
  You may not alter, transform, or build upon this work.</license-p>
<license-p>For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at
<ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode">http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode.</ext-link>
Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author's moral rights.</license-p>
</license>
</permissions>
<self-uri xlink:title="pdf" xlink:href="1.pdf"></self-uri>
<abstract>
<p>The genus
<italic>Cladosporium</italic>
is one of the largest genera of dematiaceous hyphomycetes, and is characterised by a coronate scar structure, conidia in acropetal chains and
<italic>Davidiella</italic>
teleomorphs. Based on morphology and DNA phylogeny, the species complexes of
<italic>C. herbarum</italic>
and
<italic>C. sphaerospermum</italic>
have been resolved, resulting in the elucidation of numerous new taxa. In the present study, more than 200 isolates belonging to the
<italic>C. cladosporioides</italic>
complex were examined and phylogenetically analysed on the basis of DNA sequences of the nuclear ribosomal RNA gene operon, including the internal transcribed spacer regions ITS1 and ITS2, the 5.8S nrDNA, as well as partial actin and translation elongation factor 1-α gene sequences. For the saprobic, widely distributed species
<italic>Cladosporium cladosporioides,</italic>
both a neotype and epitype are designated in order to specify a well established circumscription and concept of this species.
<italic>Cladosporium tenuissimum</italic>
and
<italic>C. oxysporum</italic>
, two saprobes abundant in the tropics, are epitypified and shown to be allied to, but distinct from
<italic>C. cladosporioides</italic>
. Twenty-two species are newly described on the basis of phylogenetic characters and cryptic morphological differences. The most important phenotypic characters for distinguishing species within the
<italic>C. cladosporioides</italic>
complex, which represents a monophyletic subclade within the genus, are shape, width, length, septation and surface ornamentation of conidia and conidiophores; length and branching patterns of conidial chains and hyphal shape, width and arrangement. Many of the treated species,
<italic>e.g.</italic>
,
<italic>C. acalyphae</italic>
,
<italic>C. angustisporum</italic>
,
<italic>C. australiense</italic>
,
<italic>C. basiinflatum</italic>
,
<italic>C. chalastosporoides</italic>
,
<italic>C. colocasiae</italic>
,
<italic>C. cucumerinum, C. exasperatum</italic>
,
<italic>C. exile</italic>
,
<italic>C. flabelliforme</italic>
,
<italic>C. gamsianum</italic>
, and
<italic>C. globisporum</italic>
are currently known only from specific hosts, or have a restricted geographical distribution. A key to all species recognised within the
<italic>C. cladosporioides</italic>
complex is provided.</p>
</abstract>
<kwd-group>
<kwd>
<italic>Cladosporium oxysporum</italic>
</kwd>
<kwd>
<italic>Cladosporium tenuissimum</italic>
</kwd>
<kwd>epitypification</kwd>
<kwd>new species</kwd>
<kwd>phylogeny</kwd>
<kwd>taxonomy</kwd>
</kwd-group>
</article-meta>
<notes>
<fn-group>
<fn>
<p>
<bold>Taxonomic novelties:</bold>
<italic>Cladosporium acalyphae</italic>
Bensch, H.D. Shin, Crous & U. Braun, sp. nov.,
<italic>C. angustisporum</italic>
Bensch, Summerell, Crous & U. Braun, sp. nov.,
<italic>C. asperulatum</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. australiense</italic>
Bensch, Summerell, Crous & U. Braun, sp. nov.,
<italic>C. basiinflatum</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. chalastosporoides</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. exasperatum</italic>
Bensch, Summerell, Crous & U. Braun, sp. nov.,
<italic>C. exile</italic>
Bensch, Glawe, Crous & U. Braun, sp. nov.,
<italic>C. flabelliforme</italic>
Bensch, Summerell, Crous & U. Braun, sp. nov.,
<italic>C. globisporum</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. hillianum</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. inversicolor</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. iranicum</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. paracladosporioides</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. perangustum</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. phyllactiniicola</italic>
Bensch, Glawe, Crous & U. Braun, sp. nov.,
<italic>C. pseudocladosporioides</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. rectoides</italic>
Bensch, H.D. Shin, Crous & U. Braun, sp. nov.,
<italic>C. scabrellum</italic>
Bensch, Schroers, Crous & U. Braun, sp. nov.,
<italic>C. subuliforme</italic>
Bensch, Crous & U. Braun, sp. nov.,
<italic>C. verrucocladosporioides</italic>
Bensch, H.D. Shin, Crous & U. Braun, sp. nov.,
<italic>C. xylophilum</italic>
Bensch, Shabunin, Crous & U. Braun, sp. nov.</p>
</fn>
</fn-group>
</notes>
</front>
</pmc>
<affiliations>
<list></list>
<tree>
<noCountry>
<name sortKey="Andersen, B" sort="Andersen, B" uniqKey="Andersen B" first="B." last="Andersen">B. Andersen</name>
<name sortKey="Bensch, K" sort="Bensch, K" uniqKey="Bensch K" first="K." last="Bensch">K. Bensch</name>
<name sortKey="Braun, U" sort="Braun, U" uniqKey="Braun U" first="U." last="Braun">U. Braun</name>
<name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name>
<name sortKey="Dijksterhuis, J" sort="Dijksterhuis, J" uniqKey="Dijksterhuis J" first="J." last="Dijksterhuis">J. Dijksterhuis</name>
<name sortKey="Dugan, F M" sort="Dugan, F M" uniqKey="Dugan F" first="F. M." last="Dugan">F. M. Dugan</name>
<name sortKey="Groenewald, J Z" sort="Groenewald, J Z" uniqKey="Groenewald J" first="J. Z." last="Groenewald">J. Z. Groenewald</name>
<name sortKey="Schroers, H J" sort="Schroers, H J" uniqKey="Schroers H" first="H.-J." last="Schroers">H.-J. Schroers</name>
<name sortKey="Shin, H D" sort="Shin, H D" uniqKey="Shin H" first="H.-D." last="Shin">H.-D. Shin</name>
<name sortKey="Starink Willemse, M" sort="Starink Willemse, M" uniqKey="Starink Willemse M" first="M." last="Starink-Willemse">M. Starink-Willemse</name>
<name sortKey="Summerell, B A" sort="Summerell, B A" uniqKey="Summerell B" first="B. A." last="Summerell">B. A. Summerell</name>
</noCountry>
</tree>
</affiliations>
</record>

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