Genome-Wide Small RNA Analysis of Soybean Reveals Auxin-Responsive microRNAs that are Differentially Expressed in Response to Salt Stress in Root Apex
Identifieur interne : 001E93 ( Ncbi/Merge ); précédent : 001E92; suivant : 001E94Genome-Wide Small RNA Analysis of Soybean Reveals Auxin-Responsive microRNAs that are Differentially Expressed in Response to Salt Stress in Root Apex
Auteurs : Zhengxi Sun [République populaire de Chine] ; Youning Wang [République populaire de Chine] ; Fupeng Mou [République populaire de Chine] ; Yinping Tian [République populaire de Chine] ; Liang Chen [République populaire de Chine] ; Senlei Zhang [République populaire de Chine] ; Qiong Jiang [République populaire de Chine] ; Xia Li [République populaire de Chine]Source :
- Frontiers in Plant Science [ 1664-462X ] ; 2016.
Abstract
Root growth and the architecture of the root system in
Url:
DOI: 10.3389/fpls.2015.01273
PubMed: 26834773
PubMed Central: 4716665
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genome-Wide Small RNA Analysis of Soybean Reveals Auxin-Responsive microRNAs that are Differentially Expressed in Response to Salt Stress in Root Apex</title><author><name sortKey="Sun, Zhengxi" sort="Sun, Zhengxi" uniqKey="Sun Z" first="Zhengxi" last="Sun">Zhengxi Sun</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="aff2"><institution>University of Chinese Academy of Sciences</institution><country>Beijing, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Wang, Youning" sort="Wang, Youning" uniqKey="Wang Y" first="Youning" last="Wang">Youning Wang</name><affiliation wicri:level="1"><nlm:aff id="aff3"><institution>State Key Laboratory of Agricultural Microbiology, College of Plant Science and Technology, Huazhong Agricultural University</institution><country>Wuhan, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Mou, Fupeng" sort="Mou, Fupeng" uniqKey="Mou F" first="Fupeng" last="Mou">Fupeng Mou</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Tian, Yinping" sort="Tian, Yinping" uniqKey="Tian Y" first="Yinping" last="Tian">Yinping Tian</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Chen, Liang" sort="Chen, Liang" uniqKey="Chen L" first="Liang" last="Chen">Liang Chen</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Zhang, Senlei" sort="Zhang, Senlei" uniqKey="Zhang S" first="Senlei" last="Zhang">Senlei Zhang</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Jiang, Qiong" sort="Jiang, Qiong" uniqKey="Jiang Q" first="Qiong" last="Jiang">Qiong Jiang</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Li, Xia" sort="Li, Xia" uniqKey="Li X" first="Xia" last="Li">Xia Li</name><affiliation wicri:level="1"><nlm:aff id="aff3"><institution>State Key Laboratory of Agricultural Microbiology, College of Plant Science and Technology, Huazhong Agricultural University</institution><country>Wuhan, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26834773</idno><idno type="pmc">4716665</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4716665</idno><idno type="RBID">PMC:4716665</idno><idno type="doi">10.3389/fpls.2015.01273</idno><date when="2016">2016</date><idno type="wicri:Area/Pmc/Corpus">000295</idno><idno type="wicri:Area/Pmc/Curation">000294</idno><idno type="wicri:Area/Pmc/Checkpoint">000162</idno><idno type="wicri:Area/Ncbi/Merge">001E93</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genome-Wide Small RNA Analysis of Soybean Reveals Auxin-Responsive microRNAs that are Differentially Expressed in Response to Salt Stress in Root Apex</title><author><name sortKey="Sun, Zhengxi" sort="Sun, Zhengxi" uniqKey="Sun Z" first="Zhengxi" last="Sun">Zhengxi Sun</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="aff2"><institution>University of Chinese Academy of Sciences</institution><country>Beijing, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Wang, Youning" sort="Wang, Youning" uniqKey="Wang Y" first="Youning" last="Wang">Youning Wang</name><affiliation wicri:level="1"><nlm:aff id="aff3"><institution>State Key Laboratory of Agricultural Microbiology, College of Plant Science and Technology, Huazhong Agricultural University</institution><country>Wuhan, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Mou, Fupeng" sort="Mou, Fupeng" uniqKey="Mou F" first="Fupeng" last="Mou">Fupeng Mou</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Tian, Yinping" sort="Tian, Yinping" uniqKey="Tian Y" first="Yinping" last="Tian">Yinping Tian</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Chen, Liang" sort="Chen, Liang" uniqKey="Chen L" first="Liang" last="Chen">Liang Chen</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Zhang, Senlei" sort="Zhang, Senlei" uniqKey="Zhang S" first="Senlei" last="Zhang">Senlei Zhang</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Jiang, Qiong" sort="Jiang, Qiong" uniqKey="Jiang Q" first="Qiong" last="Jiang">Qiong Jiang</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Li, Xia" sort="Li, Xia" uniqKey="Li X" first="Xia" last="Li">Xia Li</name><affiliation wicri:level="1"><nlm:aff id="aff3"><institution>State Key Laboratory of Agricultural Microbiology, College of Plant Science and Technology, Huazhong Agricultural University</institution><country>Wuhan, China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea></wicri:regionArea></affiliation></author></analytic><series><title level="j">Frontiers in Plant Science</title><idno type="eISSN">1664-462X</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Root growth and the architecture of the root system in <italic>Arabidopsis</italic> are largely determined by root meristematic activity. Legume roots show strong developmental plasticity in response to both abiotic and biotic stimuli, including symbiotic rhizobia. However, a global analysis of gene regulation in the root meristem of soybean plants is lacking. In this study, we performed a global analysis of the small RNA transcriptome of root tips from soybean seedlings grown under normal and salt stress conditions. In total, 71 miRNA candidates, including known and novel variants of 59 miRNA families, were identified. We found 66 salt-responsive miRNAs in the soybean root meristem; among them, 22 are novel miRNAs. Interestingly, we found auxin-responsive <italic>cis</italic>-elements in the promoters of many salt-responsive miRNAs, implying that these miRNAs may be regulated by auxin and auxin signaling plays a key role in regulating the plasticity of the miRNAome and root development in soybean. A functional analysis of miR399, a salt-responsive miRNA in the root meristem, indicates the crucial role of this miRNA in modulating soybean root developmental plasticity. Our data provide novel insight into the miRNAome-mediated regulatory mechanism in soybean root growth under salt stress.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Aghaei, K" uniqKey="Aghaei K">K. Aghaei</name></author><author><name sortKey="Ehsanpour, A A" uniqKey="Ehsanpour A">A. A. Ehsanpour</name></author><author><name sortKey="Shah, A H" uniqKey="Shah A">A. H. Shah</name></author><author><name sortKey="Komatsu, S" uniqKey="Komatsu S">S. Komatsu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aida, M" uniqKey="Aida M">M. Aida</name></author><author><name sortKey="Beis, D" uniqKey="Beis D">D. Beis</name></author><author><name sortKey="Heidstra, R" uniqKey="Heidstra R">R. Heidstra</name></author><author><name sortKey="Willemsen, V" uniqKey="Willemsen V">V. Willemsen</name></author><author><name sortKey="Blilou, I" uniqKey="Blilou I">I. Blilou</name></author><author><name sortKey="Galinha, C" uniqKey="Galinha C">C. Galinha</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aloni, R" uniqKey="Aloni R">R. Aloni</name></author><author><name sortKey="Aloni, E" uniqKey="Aloni E">E. Aloni</name></author><author><name sortKey="Langhans, M" uniqKey="Langhans M">M. Langhans</name></author><author><name sortKey="Ullrich, C I" uniqKey="Ullrich C">C. I. Ullrich</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bari, R" uniqKey="Bari R">R. Bari</name></author><author><name sortKey="Datt Pant, B" uniqKey="Datt Pant B">B. Datt Pant</name></author><author><name sortKey="Stitt, M" uniqKey="Stitt M">M. Stitt</name></author><author><name sortKey="Scheible, W R" uniqKey="Scheible W">W. R. Scheible</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bartel, D P" uniqKey="Bartel D">D. P. Bartel</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bazin, J" uniqKey="Bazin J">J. Bazin</name></author><author><name sortKey="Khan, G A" uniqKey="Khan G">G. A. Khan</name></author><author><name sortKey="Combier, J P" uniqKey="Combier J">J. P. Combier</name></author><author><name sortKey="Bustos Sanmamed, P" uniqKey="Bustos Sanmamed P">P. Bustos-Sanmamed</name></author><author><name sortKey="Debernardi, J M" uniqKey="Debernardi J">J. M. Debernardi</name></author><author><name sortKey="Rodriguez, R" uniqKey="Rodriguez R">R. Rodriguez</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Burgos, N R" uniqKey="Burgos N">N. R. Burgos</name></author><author><name sortKey="Talbert, R E" uniqKey="Talbert R">R. E. Talbert</name></author><author><name sortKey="Kim, K S" uniqKey="Kim K">K. S. Kim</name></author><author><name sortKey="Kuk, Y I" uniqKey="Kuk Y">Y. I. Kuk</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bustos Sanmamed, P" uniqKey="Bustos Sanmamed P">P. Bustos-Sanmamed</name></author><author><name sortKey="Mao, G" uniqKey="Mao G">G. Mao</name></author><author><name sortKey="Deng, Y" uniqKey="Deng Y">Y. Deng</name></author><author><name sortKey="Elouet, M" uniqKey="Elouet M">M. Elouet</name></author><author><name sortKey="Khan, G A" uniqKey="Khan G">G. A. Khan</name></author><author><name sortKey="Bazin, J" uniqKey="Bazin J">J. Bazin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, C" uniqKey="Chen C">C. Chen</name></author><author><name sortKey="Ridzon, D A" uniqKey="Ridzon D">D. A. Ridzon</name></author><author><name sortKey="Broomer, A J" uniqKey="Broomer A">A. J. Broomer</name></author><author><name sortKey="Zhou, Z" uniqKey="Zhou Z">Z. Zhou</name></author><author><name sortKey="Lee, D H" uniqKey="Lee D">D. H. Lee</name></author><author><name sortKey="Nguyen, J T" uniqKey="Nguyen J">J. T. Nguyen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, H" uniqKey="Chen H">H. Chen</name></author><author><name sortKey="Xiong, L" uniqKey="Xiong L">L. Xiong</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cui, L G" uniqKey="Cui L">L. G. Cui</name></author><author><name sortKey="Shan, J X" uniqKey="Shan J">J. X. Shan</name></author><author><name sortKey="Shi, M" uniqKey="Shi M">M. Shi</name></author><author><name sortKey="Gao, J P" uniqKey="Gao J">J. P. Gao</name></author><author><name sortKey="Lin, H X" uniqKey="Lin H">H. X. Lin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="D Alessandro, S" uniqKey="D Alessandro S">S. D'alessandro</name></author><author><name sortKey="Golin, S" uniqKey="Golin S">S. Golin</name></author><author><name sortKey="Hardtke, C S" uniqKey="Hardtke C">C. S. Hardtke</name></author><author><name sortKey="Lo Schiavo, F" uniqKey="Lo Schiavo F">F. Lo Schiavo</name></author><author><name sortKey="Zottini, M" uniqKey="Zottini M">M. Zottini</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Depuydt, S" uniqKey="Depuydt S">S. Depuydt</name></author><author><name sortKey="Rodriguez Villalon, A" uniqKey="Rodriguez Villalon A">A. Rodriguez-Villalon</name></author><author><name sortKey="Santuari, L" uniqKey="Santuari L">L. Santuari</name></author><author><name sortKey="Wyser Rmili, C" uniqKey="Wyser Rmili C">C. Wyser-Rmili</name></author><author><name sortKey="Ragni, L" uniqKey="Ragni L">L. Ragni</name></author><author><name sortKey="Hardtke, C S" uniqKey="Hardtke C">C. S. Hardtke</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Desnos, T" uniqKey="Desnos T">T. Desnos</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="De Tullio, M C" uniqKey="De Tullio M">M. C. De Tullio</name></author><author><name sortKey="Jiang, K" uniqKey="Jiang K">K. Jiang</name></author><author><name sortKey="Feldman, L J" uniqKey="Feldman L">L. J. Feldman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ding, D" uniqKey="Ding D">D. Ding</name></author><author><name sortKey="Zhang, L" uniqKey="Zhang L">L. Zhang</name></author><author><name sortKey="Wang, H" uniqKey="Wang H">H. Wang</name></author><author><name sortKey="Liu, Z" uniqKey="Liu Z">Z. Liu</name></author><author><name sortKey="Zhang, Z" uniqKey="Zhang Z">Z. Zhang</name></author><author><name sortKey="Zheng, Y" uniqKey="Zheng Y">Y. Zheng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ding, Z" uniqKey="Ding Z">Z. Ding</name></author><author><name sortKey="Friml, J" uniqKey="Friml J">J. Friml</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dinneny, J R" uniqKey="Dinneny J">J. R. Dinneny</name></author><author><name sortKey="Benfey, P N" uniqKey="Benfey P">P. N. Benfey</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dinneny, J R" uniqKey="Dinneny J">J. R. Dinneny</name></author><author><name sortKey="Long, T A" uniqKey="Long T">T. A. Long</name></author><author><name sortKey="Wang, J Y" uniqKey="Wang J">J. Y. Wang</name></author><author><name sortKey="Jung, J W" uniqKey="Jung J">J. W. Jung</name></author><author><name sortKey="Mace, D" uniqKey="Mace D">D. Mace</name></author><author><name sortKey="Pointer, S" uniqKey="Pointer S">S. Pointer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ferguson, B J" uniqKey="Ferguson B">B. J. Ferguson</name></author><author><name sortKey="Indrasumunar, A" uniqKey="Indrasumunar A">A. Indrasumunar</name></author><author><name sortKey="Hayashi, S" uniqKey="Hayashi S">S. Hayashi</name></author><author><name sortKey="Lin, M H" uniqKey="Lin M">M. H. Lin</name></author><author><name sortKey="Lin, Y H" uniqKey="Lin Y">Y. H. Lin</name></author><author><name sortKey="Reid, D E" uniqKey="Reid D">D. E. Reid</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Fernandez Marcos, M" uniqKey="Fernandez Marcos M">M. Fernández-Marcos</name></author><author><name sortKey="Sanz, L" uniqKey="Sanz L">L. Sanz</name></author><author><name sortKey="Lewis, D R" uniqKey="Lewis D">D. R. Lewis</name></author><author><name sortKey="Muday, G K" uniqKey="Muday G">G. K. Muday</name></author><author><name sortKey="Lorenzo, O" uniqKey="Lorenzo O">O. Lorenzo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Formey, D" uniqKey="Formey D">D. Formey</name></author><author><name sortKey="Sallet, E" uniqKey="Sallet E">E. Sallet</name></author><author><name sortKey="Lelandais Briere, C" uniqKey="Lelandais Briere C">C. Lelandais-Brière</name></author><author><name sortKey="Ben, C" uniqKey="Ben C">C. Ben</name></author><author><name sortKey="Bustos Sanmamed, P" uniqKey="Bustos Sanmamed P">P. Bustos-Sanmamed</name></author><author><name sortKey="Niebel, A" uniqKey="Niebel A">A. Niebel</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Fu, J" uniqKey="Fu J">J. Fu</name></author><author><name sortKey="Chu, J" uniqKey="Chu J">J. Chu</name></author><author><name sortKey="Sun, X" uniqKey="Sun X">X. Sun</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J. Wang</name></author><author><name sortKey="Yan, C" uniqKey="Yan C">C. Yan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ge, Y" uniqKey="Ge Y">Y. Ge</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y. Li</name></author><author><name sortKey="Zhu, Y M" uniqKey="Zhu Y">Y. M. Zhu</name></author><author><name sortKey="Bai, X" uniqKey="Bai X">X. Bai</name></author><author><name sortKey="Lv, D K" uniqKey="Lv D">D. K. Lv</name></author><author><name sortKey="Guo, D" uniqKey="Guo D">D. Guo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Grunewald, W" uniqKey="Grunewald W">W. Grunewald</name></author><author><name sortKey="Smet, I D" uniqKey="Smet I">I. D. Smet</name></author><author><name sortKey="Lewis, D R" uniqKey="Lewis D">D. R. Lewis</name></author><author><name sortKey="Lofke, C" uniqKey="Lofke C">C. Löfke</name></author><author><name sortKey="Jansen, L" uniqKey="Jansen L">L. Jansen</name></author><author><name sortKey="Goeminne, G" uniqKey="Goeminne G">G. Goeminne</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Guan, R" uniqKey="Guan R">R. Guan</name></author><author><name sortKey="Qu, Y" uniqKey="Qu Y">Y. Qu</name></author><author><name sortKey="Guo, Y" uniqKey="Guo Y">Y. Guo</name></author><author><name sortKey="Yu, L" uniqKey="Yu L">L. Yu</name></author><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y. Liu</name></author><author><name sortKey="Jiang, J" uniqKey="Jiang J">J. Jiang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hackenberg, M" uniqKey="Hackenberg M">M. Hackenberg</name></author><author><name sortKey="Shi, B J" uniqKey="Shi B">B.-J. Shi</name></author><author><name sortKey="Gustafson, P" uniqKey="Gustafson P">P. Gustafson</name></author><author><name sortKey="Langridge, P" uniqKey="Langridge P">P. Langridge</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Helariutta, Y" uniqKey="Helariutta Y">Y. Helariutta</name></author><author><name sortKey="Fukaki, H" uniqKey="Fukaki H">H. Fukaki</name></author><author><name sortKey="Wysocka Diller, J" uniqKey="Wysocka Diller J">J. Wysocka-Diller</name></author><author><name sortKey="Nakajima, K" uniqKey="Nakajima K">K. Nakajima</name></author><author><name sortKey="Jung, J" uniqKey="Jung J">J. Jung</name></author><author><name sortKey="Sena, G" uniqKey="Sena G">G. Sena</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Horiguchi, G" uniqKey="Horiguchi G">G. Horiguchi</name></author><author><name sortKey="Kim, G" uniqKey="Kim G">G. Kim</name></author><author><name sortKey="Tsukaya, H" uniqKey="Tsukaya H">H. Tsukaya</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hsieh, L C" uniqKey="Hsieh L">L. C. Hsieh</name></author><author><name sortKey="Lin, S I" uniqKey="Lin S">S. I. Lin</name></author><author><name sortKey="Shih, A C" uniqKey="Shih A">A. C. Shih</name></author><author><name sortKey="Chen, J W" uniqKey="Chen J">J. W. Chen</name></author><author><name sortKey="Lin, W Y" uniqKey="Lin W">W. Y. Lin</name></author><author><name sortKey="Tseng, C Y" uniqKey="Tseng C">C. Y. Tseng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Im, J H" uniqKey="Im J">J. H. Im</name></author><author><name sortKey="Lee, H" uniqKey="Lee H">H. Lee</name></author><author><name sortKey="Kim, J" uniqKey="Kim J">J. Kim</name></author><author><name sortKey="Kim, H B" uniqKey="Kim H">H. B. Kim</name></author><author><name sortKey="An, C S" uniqKey="An C">C. S. An</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ji, H" uniqKey="Ji H">H. Ji</name></author><author><name sortKey="Liu, L" uniqKey="Liu L">L. Liu</name></author><author><name sortKey="Li, K" uniqKey="Li K">K. Li</name></author><author><name sortKey="Xie, Q" uniqKey="Xie Q">Q. Xie</name></author><author><name sortKey="Wang, Z" uniqKey="Wang Z">Z. Wang</name></author><author><name sortKey="Zhao, X" uniqKey="Zhao X">X. Zhao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jia, X" uniqKey="Jia X">X. Jia</name></author><author><name sortKey="Wang, W X" uniqKey="Wang W">W. X. Wang</name></author><author><name sortKey="Ren, L" uniqKey="Ren L">L. Ren</name></author><author><name sortKey="Chen, Q J" uniqKey="Chen Q">Q. J. Chen</name></author><author><name sortKey="Mendu, V" uniqKey="Mendu V">V. Mendu</name></author><author><name sortKey="Willcut, B" uniqKey="Willcut B">B. Willcut</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jian, B" uniqKey="Jian B">B. Jian</name></author><author><name sortKey="Hou, W" uniqKey="Hou W">W. Hou</name></author><author><name sortKey="Wu, C" uniqKey="Wu C">C. Wu</name></author><author><name sortKey="Liu, B" uniqKey="Liu B">B. Liu</name></author><author><name sortKey="Liu, W" uniqKey="Liu W">W. Liu</name></author><author><name sortKey="Song, S" uniqKey="Song S">S. Song</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jiang, K" uniqKey="Jiang K">K. Jiang</name></author><author><name sortKey="Feldman, L" uniqKey="Feldman L">L. Feldman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kereszt, A" uniqKey="Kereszt A">A. Kereszt</name></author><author><name sortKey="Li, D" uniqKey="Li D">D. Li</name></author><author><name sortKey="Indrasumunar, A" uniqKey="Indrasumunar A">A. Indrasumunar</name></author><author><name sortKey="Nguyen, C D T" uniqKey="Nguyen C">C. D. T. Nguyen</name></author><author><name sortKey="Nontachaiyapoom, S" uniqKey="Nontachaiyapoom S">S. Nontachaiyapoom</name></author><author><name sortKey="Kinkema, M" uniqKey="Kinkema M">M. Kinkema</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kerk, N M" uniqKey="Kerk N">N. M. Kerk</name></author><author><name sortKey="Jiang, K" uniqKey="Jiang K">K. Jiang</name></author><author><name sortKey="Feldman, L J" uniqKey="Feldman L">L. J. Feldman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Khraiwesh, B" uniqKey="Khraiwesh B">B. Khraiwesh</name></author><author><name sortKey="Zhu, J K" uniqKey="Zhu J">J. K. Zhu</name></author><author><name sortKey="Zhu, J" uniqKey="Zhu J">J. Zhu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kulcheski, F R" uniqKey="Kulcheski F">F. R. Kulcheski</name></author><author><name sortKey="Marcelino Guimaraes, F C" uniqKey="Marcelino Guimaraes F">F. C. Marcelino-Guimaraes</name></author><author><name sortKey="Nepomuceno, A L" uniqKey="Nepomuceno A">A. L. Nepomuceno</name></author><author><name sortKey="Abdelnoor, R V" uniqKey="Abdelnoor R">R. V. Abdelnoor</name></author><author><name sortKey="Margis, R" uniqKey="Margis R">R. Margis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kuo, H F" uniqKey="Kuo H">H. F. Kuo</name></author><author><name sortKey="Chiou, T J" uniqKey="Chiou T">T. J. Chiou</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lavenus, J" uniqKey="Lavenus J">J. Lavenus</name></author><author><name sortKey="Goh, T" uniqKey="Goh T">T. Goh</name></author><author><name sortKey="Roberts, I" uniqKey="Roberts I">I. Roberts</name></author><author><name sortKey="Guyomarc H, S" uniqKey="Guyomarc H S">S. Guyomarc'h</name></author><author><name sortKey="Lucas, M" uniqKey="Lucas M">M. Lucas</name></author><author><name sortKey="De Smet, I" uniqKey="De Smet I">I. De Smet</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lelandais Briere, C" uniqKey="Lelandais Briere C">C. Lelandais-Briere</name></author><author><name sortKey="Naya, L" uniqKey="Naya L">L. Naya</name></author><author><name sortKey="Sallet, E" uniqKey="Sallet E">E. Sallet</name></author><author><name sortKey="Calenge, F" uniqKey="Calenge F">F. Calenge</name></author><author><name sortKey="Frugier, F" uniqKey="Frugier F">F. Frugier</name></author><author><name sortKey="Hartmann, C" uniqKey="Hartmann C">C. Hartmann</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Li, H" uniqKey="Li H">H. Li</name></author><author><name sortKey="Deng, Y" uniqKey="Deng Y">Y. Deng</name></author><author><name sortKey="Wu, T" uniqKey="Wu T">T. Wu</name></author><author><name sortKey="Subramanian, S" uniqKey="Subramanian S">S. Subramanian</name></author><author><name sortKey="Yu, O" uniqKey="Yu O">O. Yu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Li, W" uniqKey="Li W">W. Li</name></author><author><name sortKey="Wang, T" uniqKey="Wang T">T. Wang</name></author><author><name sortKey="Zhang, Y" uniqKey="Zhang Y">Y. Zhang</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y. Li</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, W" uniqKey="Liu W">W. Liu</name></author><author><name sortKey="Li, R J" uniqKey="Li R">R. J. Li</name></author><author><name sortKey="Han, T T" uniqKey="Han T">T. T. Han</name></author><author><name sortKey="Cai, W" uniqKey="Cai W">W. Cai</name></author><author><name sortKey="Fu, Z W" uniqKey="Fu Z">Z. W. Fu</name></author><author><name sortKey="Lu, Y T" uniqKey="Lu Y">Y. T. Lu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y. Liu</name></author><author><name sortKey="Lai, N" uniqKey="Lai N">N. Lai</name></author><author><name sortKey="Gao, K" uniqKey="Gao K">K. Gao</name></author><author><name sortKey="Chen, F" uniqKey="Chen F">F. Chen</name></author><author><name sortKey="Yuan, L" uniqKey="Yuan L">L. Yuan</name></author><author><name sortKey="Mi, G" uniqKey="Mi G">G. Mi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lu, Y B" uniqKey="Lu Y">Y. B. Lu</name></author><author><name sortKey="Yang, L T" uniqKey="Yang L">L. T. Yang</name></author><author><name sortKey="Qi, Y P" uniqKey="Qi Y">Y. P. Qi</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y. Li</name></author><author><name sortKey="Li, Z" uniqKey="Li Z">Z. Li</name></author><author><name sortKey="Chen, Y B" uniqKey="Chen Y">Y. B. Chen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Marchant, A" uniqKey="Marchant A">A. Marchant</name></author><author><name sortKey="Bhalerao, R" uniqKey="Bhalerao R">R. Bhalerao</name></author><author><name sortKey="Casimiro, I" uniqKey="Casimiro I">I. Casimiro</name></author><author><name sortKey="Eklof, J" uniqKey="Eklof J">J. Eklöf</name></author><author><name sortKey="Casero, P J" uniqKey="Casero P">P. J. Casero</name></author><author><name sortKey="Bennett, M" uniqKey="Bennett M">M. Bennett</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Marin, E" uniqKey="Marin E">E. Marin</name></author><author><name sortKey="Jouannet, V" uniqKey="Jouannet V">V. Jouannet</name></author><author><name sortKey="Herz, A" uniqKey="Herz A">A. Herz</name></author><author><name sortKey="Lokerse, A S" uniqKey="Lokerse A">A. S. Lokerse</name></author><author><name sortKey="Weijers, D" uniqKey="Weijers D">D. Weijers</name></author><author><name sortKey="Vaucheret, H" uniqKey="Vaucheret H">H. Vaucheret</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Meyers, B C" uniqKey="Meyers B">B. C. Meyers</name></author><author><name sortKey="Axtell, M J" uniqKey="Axtell M">M. J. Axtell</name></author><author><name sortKey="Bartel, B" uniqKey="Bartel B">B. Bartel</name></author><author><name sortKey="Bartel, D P" uniqKey="Bartel D">D. P. Bartel</name></author><author><name sortKey="Baulcombe, D" uniqKey="Baulcombe D">D. Baulcombe</name></author><author><name sortKey="Bowman, J L" uniqKey="Bowman J">J. L. Bowman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Perilli, S" uniqKey="Perilli S">S. Perilli</name></author><author><name sortKey="Di Mambro, R" uniqKey="Di Mambro R">R. Di Mambro</name></author><author><name sortKey="Sabatini, S" uniqKey="Sabatini S">S. Sabatini</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Petricka, J J" uniqKey="Petricka J">J. J. Petricka</name></author><author><name sortKey="Winter, C M" uniqKey="Winter C">C. M. Winter</name></author><author><name sortKey="Benfey, P N" uniqKey="Benfey P">P. N. Benfey</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rao, S S" uniqKey="Rao S">S. S. Rao</name></author><author><name sortKey="El Habbak, M H" uniqKey="El Habbak M">M. H. El-Habbak</name></author><author><name sortKey="Havens, W M" uniqKey="Havens W">W. M. Havens</name></author><author><name sortKey="Singh, A" uniqKey="Singh A">A. Singh</name></author><author><name sortKey="Zheng, D" uniqKey="Zheng D">D. Zheng</name></author><author><name sortKey="Vaughn, L" uniqKey="Vaughn L">L. Vaughn</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Singh, A" uniqKey="Singh A">A. Singh</name></author><author><name sortKey="Singh, S" uniqKey="Singh S">S. Singh</name></author><author><name sortKey="Panigrahi, K C" uniqKey="Panigrahi K">K. C. Panigrahi</name></author><author><name sortKey="Reski, R" uniqKey="Reski R">R. Reski</name></author><author><name sortKey="Sarkar, A K" uniqKey="Sarkar A">A. K. Sarkar</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sobhanian, H" uniqKey="Sobhanian H">H. Sobhanian</name></author><author><name sortKey="Razavizadeh, R" uniqKey="Razavizadeh R">R. Razavizadeh</name></author><author><name sortKey="Nanjo, Y" uniqKey="Nanjo Y">Y. Nanjo</name></author><author><name sortKey="Ehsanpour, A A" uniqKey="Ehsanpour A">A. A. Ehsanpour</name></author><author><name sortKey="Jazii, F R" uniqKey="Jazii F">F. R. Jazii</name></author><author><name sortKey="Motamed, N" uniqKey="Motamed N">N. Motamed</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sunkar, R" uniqKey="Sunkar R">R. Sunkar</name></author><author><name sortKey="Li, Y F" uniqKey="Li Y">Y. F. Li</name></author><author><name sortKey="Jagadeeswaran, G" uniqKey="Jagadeeswaran G">G. Jagadeeswaran</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Svistoonoff, S" uniqKey="Svistoonoff S">S. Svistoonoff</name></author><author><name sortKey="Creff, A" uniqKey="Creff A">A. Creff</name></author><author><name sortKey="Reymond, M" uniqKey="Reymond M">M. Reymond</name></author><author><name sortKey="Sigoillot Claude, C" uniqKey="Sigoillot Claude C">C. Sigoillot-Claude</name></author><author><name sortKey="Ricaud, L" uniqKey="Ricaud L">L. Ricaud</name></author><author><name sortKey="Blanchet, A" uniqKey="Blanchet A">A. Blanchet</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Turner, M" uniqKey="Turner M">M. Turner</name></author><author><name sortKey="Adhikari, S" uniqKey="Adhikari S">S. Adhikari</name></author><author><name sortKey="Subramanian, S" uniqKey="Subramanian S">S. Subramanian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ubeda Tomas, S" uniqKey="Ubeda Tomas S">S. Ubeda-Tomas</name></author><author><name sortKey="Bennett, M J" uniqKey="Bennett M">M. J. Bennett</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, Z" uniqKey="Wang Z">Z. Wang</name></author><author><name sortKey="Hu, H" uniqKey="Hu H">H. Hu</name></author><author><name sortKey="Huang, H" uniqKey="Huang H">H. Huang</name></author><author><name sortKey="Duan, K" uniqKey="Duan K">K. Duan</name></author><author><name sortKey="Wu, Z" uniqKey="Wu Z">Z. Wu</name></author><author><name sortKey="Wu, P" uniqKey="Wu P">P. Wu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="West, G" uniqKey="West G">G. West</name></author><author><name sortKey="Inze, D" uniqKey="Inze D">D. Inzé</name></author><author><name sortKey="Beemster, G T" uniqKey="Beemster G">G. T. Beemster</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Xie, F" uniqKey="Xie F">F. Xie</name></author><author><name sortKey="Stewart, C N" uniqKey="Stewart C">C. N. Stewart</name></author><author><name sortKey="Taki, F A" uniqKey="Taki F">F. A. Taki</name></author><author><name sortKey="He, Q" uniqKey="He Q">Q. He</name></author><author><name sortKey="Liu, H" uniqKey="Liu H">H. Liu</name></author><author><name sortKey="Zhang, B" uniqKey="Zhang B">B. Zhang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Xu, F" uniqKey="Xu F">F. Xu</name></author><author><name sortKey="Liu, Q" uniqKey="Liu Q">Q. Liu</name></author><author><name sortKey="Chen, L" uniqKey="Chen L">L. Chen</name></author><author><name sortKey="Kuang, J" uniqKey="Kuang J">J. Kuang</name></author><author><name sortKey="Walk, T" uniqKey="Walk T">T. Walk</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J. Wang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yasuta, Y" uniqKey="Yasuta Y">Y. Yasuta</name></author><author><name sortKey="Kokubun, M" uniqKey="Kokubun M">M. Kokubun</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhang, W" uniqKey="Zhang W">W. Zhang</name></author><author><name sortKey="Swarup, R" uniqKey="Swarup R">R. Swarup</name></author><author><name sortKey="Bennett, M" uniqKey="Bennett M">M. Bennett</name></author><author><name sortKey="Schaller, G E" uniqKey="Schaller G">G. E. Schaller</name></author><author><name sortKey="Kieber, J J" uniqKey="Kieber J">J. J. Kieber</name></author></analytic></biblStruct></listBibl></div1></back></TEI><pmc article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Front Plant Sci</journal-id><journal-id journal-id-type="iso-abbrev">Front Plant Sci</journal-id><journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id><journal-title-group><journal-title>Frontiers in Plant Science</journal-title></journal-title-group><issn pub-type="epub">1664-462X</issn><publisher><publisher-name>Frontiers Media S.A.</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">26834773</article-id><article-id pub-id-type="pmc">4716665</article-id><article-id pub-id-type="doi">10.3389/fpls.2015.01273</article-id><article-categories><subj-group subj-group-type="heading"><subject>Plant Science</subject><subj-group><subject>Original Research</subject></subj-group></subj-group></article-categories><title-group><article-title>Genome-Wide Small RNA Analysis of Soybean Reveals Auxin-Responsive microRNAs that are Differentially Expressed in Response to Salt Stress in Root Apex</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Sun</surname><given-names>Zhengxi</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><xref ref-type="aff" rid="aff2"><sup>2</sup></xref><xref ref-type="author-notes" rid="fn003"><sup>†</sup></xref><uri xlink:type="simple" xlink:href="http://loop.frontiersin.org/people/306882/overview"></uri></contrib><contrib contrib-type="author"><name><surname>Wang</surname><given-names>Youning</given-names></name><xref ref-type="aff" rid="aff3"><sup>3</sup></xref><xref ref-type="author-notes" rid="fn003"><sup>†</sup></xref></contrib><contrib contrib-type="author"><name><surname>Mou</surname><given-names>Fupeng</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><uri xlink:type="simple" xlink:href="http://loop.frontiersin.org/people/289023/overview"></uri></contrib><contrib contrib-type="author"><name><surname>Tian</surname><given-names>Yinping</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author"><name><surname>Chen</surname><given-names>Liang</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author"><name><surname>Zhang</surname><given-names>Senlei</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author"><name><surname>Jiang</surname><given-names>Qiong</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author"><name><surname>Li</surname><given-names>Xia</given-names></name><xref ref-type="aff" rid="aff3"><sup>3</sup></xref><xref ref-type="author-notes" rid="fn001"><sup>*</sup></xref><uri xlink:type="simple" xlink:href="http://loop.frontiersin.org/people/110076/overview"></uri></contrib></contrib-group><aff id="aff1"><sup>1</sup><institution>State Key Laboratory of Plant Cell and Chromosome Engineering, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences</institution><country>Shijiazhuang, China</country></aff><aff id="aff2"><sup>2</sup><institution>University of Chinese Academy of Sciences</institution><country>Beijing, China</country></aff><aff id="aff3"><sup>3</sup><institution>State Key Laboratory of Agricultural Microbiology, College of Plant Science and Technology, Huazhong Agricultural University</institution><country>Wuhan, China</country></aff><author-notes><fn fn-type="edited-by"><p>Edited by: Frantisek Baluska, University of Bonn, Germany</p></fn><fn fn-type="edited-by"><p>Reviewed by: Kriton Kalantidis, Foundation for Research and Technology-Hellas, Greece; Alok Krishna Sinha, National Institute of Plant Genome Research, India</p></fn><corresp id="fn001">*Correspondence: Xia Li <email xlink:type="simple">xli@mail.hzau.edu.cn</email></corresp><fn fn-type="other" id="fn002"><p>This article was submitted to Plant Evolution and Development, a section of the journal Frontiers in Plant Science</p></fn><fn fn-type="other" id="fn003"><p>†These authors have contributed equally to this work.</p></fn></author-notes><pub-date pub-type="epub"><day>18</day><month>1</month><year>2016</year></pub-date><pub-date pub-type="collection"><year>2015</year></pub-date><volume>6</volume><elocation-id>1273</elocation-id><history><date date-type="received"><day>29</day><month>10</month><year>2015</year></date><date date-type="accepted"><day>28</day><month>12</month><year>2015</year></date></history><permissions><copyright-statement>Copyright © 2016 Sun, Wang, Mou, Tian, Chen, Zhang, Jiang and Li.</copyright-statement><copyright-year>2016</copyright-year><copyright-holder>Sun, Wang, Mou, Tian, Chen, Zhang, Jiang and Li</copyright-holder><license xlink:href="http://creativecommons.org/licenses/by/4.0/"><license-p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</license-p></license></permissions><abstract><p>Root growth and the architecture of the root system in <italic>Arabidopsis</italic> are largely determined by root meristematic activity. Legume roots show strong developmental plasticity in response to both abiotic and biotic stimuli, including symbiotic rhizobia. However, a global analysis of gene regulation in the root meristem of soybean plants is lacking. In this study, we performed a global analysis of the small RNA transcriptome of root tips from soybean seedlings grown under normal and salt stress conditions. In total, 71 miRNA candidates, including known and novel variants of 59 miRNA families, were identified. We found 66 salt-responsive miRNAs in the soybean root meristem; among them, 22 are novel miRNAs. Interestingly, we found auxin-responsive <italic>cis</italic>-elements in the promoters of many salt-responsive miRNAs, implying that these miRNAs may be regulated by auxin and auxin signaling plays a key role in regulating the plasticity of the miRNAome and root development in soybean. A functional analysis of miR399, a salt-responsive miRNA in the root meristem, indicates the crucial role of this miRNA in modulating soybean root developmental plasticity. Our data provide novel insight into the miRNAome-mediated regulatory mechanism in soybean root growth under salt stress.</p></abstract><kwd-group><kwd><italic>Glycine max</italic></kwd><kwd>root meristem</kwd><kwd>microRNA (miRNA)</kwd><kwd>salt stress</kwd><kwd>auxin</kwd></kwd-group><funding-group><award-group><funding-source id="cn001">National Natural Science Foundation of China<named-content content-type="fundref-id">10.13039/501100001809</named-content></funding-source></award-group><award-group><funding-source id="cn002">Ministry of Agriculture of the People's Republic of China<named-content content-type="fundref-id">10.13039/501100004573</named-content></funding-source></award-group><award-group><funding-source id="cn003">Youth Innovation Promotion Association of the Chinese Academy of Sciences<named-content content-type="fundref-id">10.13039/501100004739</named-content></funding-source></award-group></funding-group><counts><fig-count count="8"></fig-count><table-count count="1"></table-count><equation-count count="0"></equation-count><ref-count count="65"></ref-count><page-count count="12"></page-count><word-count count="8721"></word-count></counts></article-meta></front></pmc><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Sun, Zhengxi" sort="Sun, Zhengxi" uniqKey="Sun Z" first="Zhengxi" last="Sun">Zhengxi Sun</name></noRegion><name sortKey="Chen, Liang" sort="Chen, Liang" uniqKey="Chen L" first="Liang" last="Chen">Liang Chen</name><name sortKey="Jiang, Qiong" sort="Jiang, Qiong" uniqKey="Jiang Q" first="Qiong" last="Jiang">Qiong Jiang</name><name sortKey="Li, Xia" sort="Li, Xia" uniqKey="Li X" first="Xia" last="Li">Xia Li</name><name sortKey="Mou, Fupeng" sort="Mou, Fupeng" uniqKey="Mou F" first="Fupeng" last="Mou">Fupeng Mou</name><name sortKey="Sun, Zhengxi" sort="Sun, Zhengxi" uniqKey="Sun Z" first="Zhengxi" last="Sun">Zhengxi Sun</name><name sortKey="Tian, Yinping" sort="Tian, Yinping" uniqKey="Tian Y" first="Yinping" last="Tian">Yinping Tian</name><name sortKey="Wang, Youning" sort="Wang, Youning" uniqKey="Wang Y" first="Youning" last="Wang">Youning Wang</name><name sortKey="Zhang, Senlei" sort="Zhang, Senlei" uniqKey="Zhang S" first="Senlei" last="Zhang">Senlei Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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