Diversity in the Architecture of ATLs, a Family of Plant Ubiquitin-Ligases, Leads to Recognition and Targeting of Substrates in Different Cellular Environments
Identifieur interne : 000E11 ( Ncbi/Checkpoint ); précédent : 000E10; suivant : 000E12Diversity in the Architecture of ATLs, a Family of Plant Ubiquitin-Ligases, Leads to Recognition and Targeting of Substrates in Different Cellular Environments
Auteurs : Victor Aguilar-Hernández ; Laura Aguilar-Henonin ; Plinio GuzmánSource :
- PLoS ONE [ 1932-6203 ] ; 2011.
Abstract
Ubiquitin-ligases or E3s are components of the ubiquitin proteasome system (UPS) that coordinate the transfer of ubiquitin to the target protein. A major class of ubiquitin-ligases consists of RING-finger domain proteins that include the substrate recognition sequences in the same polypeptide; these are known as single-subunit RING finger E3s. We are studying a particular family of RING finger E3s, named ATL, that contain a transmembrane domain and the RING-H2 finger domain; none of the member of the family contains any other previously described domain. Although the study of a few members in
Url:
DOI: 10.1371/journal.pone.0023934
PubMed: 21887349
PubMed Central: 3161093
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Diversity in the Architecture of ATLs, a Family of Plant Ubiquitin-Ligases, Leads to Recognition and Targeting of Substrates in Different Cellular Environments</title><author><name sortKey="Aguilar Hernandez, Victor" sort="Aguilar Hernandez, Victor" uniqKey="Aguilar Hernandez V" first="Victor" last="Aguilar-Hernández">Victor Aguilar-Hernández</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Aguilar Henonin, Laura" sort="Aguilar Henonin, Laura" uniqKey="Aguilar Henonin L" first="Laura" last="Aguilar-Henonin">Laura Aguilar-Henonin</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Guzman, Plinio" sort="Guzman, Plinio" uniqKey="Guzman P" first="Plinio" last="Guzmán">Plinio Guzmán</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">21887349</idno><idno type="pmc">3161093</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3161093</idno><idno type="RBID">PMC:3161093</idno><idno type="doi">10.1371/journal.pone.0023934</idno><date when="2011">2011</date><idno type="wicri:Area/Pmc/Corpus">001223</idno><idno type="wicri:Area/Pmc/Curation">001222</idno><idno type="wicri:Area/Pmc/Checkpoint">000E67</idno><idno type="wicri:Area/Ncbi/Merge">000E11</idno><idno type="wicri:Area/Ncbi/Curation">000E11</idno><idno type="wicri:Area/Ncbi/Checkpoint">000E11</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Diversity in the Architecture of ATLs, a Family of Plant Ubiquitin-Ligases, Leads to Recognition and Targeting of Substrates in Different Cellular Environments</title><author><name sortKey="Aguilar Hernandez, Victor" sort="Aguilar Hernandez, Victor" uniqKey="Aguilar Hernandez V" first="Victor" last="Aguilar-Hernández">Victor Aguilar-Hernández</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Aguilar Henonin, Laura" sort="Aguilar Henonin, Laura" uniqKey="Aguilar Henonin L" first="Laura" last="Aguilar-Henonin">Laura Aguilar-Henonin</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Guzman, Plinio" sort="Guzman, Plinio" uniqKey="Guzman P" first="Plinio" last="Guzmán">Plinio Guzmán</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2011">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Ubiquitin-ligases or E3s are components of the ubiquitin proteasome system (UPS) that coordinate the transfer of ubiquitin to the target protein. A major class of ubiquitin-ligases consists of RING-finger domain proteins that include the substrate recognition sequences in the same polypeptide; these are known as single-subunit RING finger E3s. We are studying a particular family of RING finger E3s, named ATL, that contain a transmembrane domain and the RING-H2 finger domain; none of the member of the family contains any other previously described domain. Although the study of a few members in <italic>A. thaliana</italic> and <italic>O. sativa</italic> has been reported, the role of this family in the life cycle of a plant is still vague. To provide tools to advance on the functional analysis of this family we have undertaken a phylogenetic analysis of ATLs in twenty-four plant genomes. <italic>ATL</italic>s were found in all the 24 plant species analyzed, in numbers ranging from 20–28 in two basal species to 162 in soybean. Analysis of <italic>ATL</italic>s arrayed in tandem indicates that sets of genes are expanding in a species-specific manner. To get insights into the domain architecture of ATLs we generated 75 pHMM LOGOs from 1815 ATLs, and unraveled potential protein-protein interaction regions by means of yeast two-hybrid assays. Several ATLs were found to interact with DSK2a/ubiquilin through a region at the amino-terminal end, suggesting that this is a widespread interaction that may assist in the mode of action of ATLs; the region was traced to a distinct sequence LOGO. Our analysis provides significant observations on the evolution and expansion of the ATL family in addition to information on the domain structure of this class of ubiquitin-ligases that may be involved in plant adaptation to environmental stress.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Glickman, Mh" uniqKey="Glickman M">MH Glickman</name></author><author><name sortKey="Ciechanover, A" uniqKey="Ciechanover A">A Ciechanover</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Vierstra, Rd" uniqKey="Vierstra R">RD Vierstra</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Deshaies, Rj" uniqKey="Deshaies R">RJ Deshaies</name></author><author><name sortKey="Joazeiro, Cap" uniqKey="Joazeiro C">CAP Joazeiro</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Li, W" uniqKey="Li W">W Li</name></author><author><name sortKey="Bengtson, Mh" uniqKey="Bengtson M">MH Bengtson</name></author><author><name sortKey="Ulbrich, A" uniqKey="Ulbrich A">A Ulbrich</name></author><author><name sortKey="Matsuda, A" uniqKey="Matsuda A">A Matsuda</name></author><author><name sortKey="Reddy, Va" uniqKey="Reddy V">VA Reddy</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Stone, Sl" uniqKey="Stone S">SL Stone</name></author><author><name sortKey="Hauksd Ttir, H" uniqKey="Hauksd Ttir H">H Hauksdóttir</name></author><author><name sortKey="Troy, A" uniqKey="Troy A">A Troy</name></author><author><name sortKey="Herschleb, J" uniqKey="Herschleb J">J Herschleb</name></author><author><name sortKey="Kraft, E" uniqKey="Kraft E">E Kraft</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mehnert, M" uniqKey="Mehnert M">M Mehnert</name></author><author><name sortKey="Sommer, T" uniqKey="Sommer T">T Sommer</name></author><author><name sortKey="Jarosch, E" uniqKey="Jarosch E">E Jarosch</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Meusser, B" uniqKey="Meusser B">B Meusser</name></author><author><name sortKey="Hirsch, C" uniqKey="Hirsch C">C Hirsch</name></author><author><name sortKey="Jarosch, E" uniqKey="Jarosch E">E Jarosch</name></author><author><name sortKey="Sommer, T" uniqKey="Sommer T">T Sommer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Carvalho, P" uniqKey="Carvalho P">P Carvalho</name></author><author><name sortKey="Goder, V" uniqKey="Goder V">V Goder</name></author><author><name sortKey="Rapoport, Ta" uniqKey="Rapoport T">TA Rapoport</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ballar, P" uniqKey="Ballar P">P Ballar</name></author><author><name sortKey="Ors, Au" uniqKey="Ors A">AU Ors</name></author><author><name sortKey="Yang, H" uniqKey="Yang H">H Yang</name></author><author><name sortKey="Fang, S" uniqKey="Fang S">S Fang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Livnat Levanon, N" uniqKey="Livnat Levanon N">N Livnat-Levanon</name></author><author><name sortKey="Glickman, Mh" uniqKey="Glickman M">MH Glickman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kawasaki, T" uniqKey="Kawasaki T">T Kawasaki</name></author><author><name sortKey="Nam, J" uniqKey="Nam J">J Nam</name></author><author><name sortKey="Boyes, Dc" uniqKey="Boyes D">DC Boyes</name></author><author><name sortKey="Holt, Bf" uniqKey="Holt B">BF Holt</name></author><author><name sortKey="Hubert, Da" uniqKey="Hubert D">DA Hubert</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Salinas Mondrag N, Re" uniqKey="Salinas Mondrag N R">RE Salinas-Mondragón</name></author><author><name sortKey="Garcidue As Pi A, C" uniqKey="Garcidue As Pi A C">C Garcidueñas-Piña</name></author><author><name sortKey="Guzman, P" uniqKey="Guzman P">P Guzmán</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Serrano, M" uniqKey="Serrano M">M Serrano</name></author><author><name sortKey="Parra, S" uniqKey="Parra S">S Parra</name></author><author><name sortKey="Alcaraz, Ld" uniqKey="Alcaraz L">LD Alcaraz</name></author><author><name sortKey="Guzman, P" uniqKey="Guzman P">P Guzmán</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Martinez Garcia, M" uniqKey="Martinez Garcia M">M Martínez-García</name></author><author><name sortKey="Garcidue As Pi A, C" uniqKey="Garcidue As Pi A C">C Garcidueñas-Piña</name></author><author><name sortKey="Guzman, P" uniqKey="Guzman P">P Guzmán</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aguilar Henonin, L" uniqKey="Aguilar Henonin L">L Aguilar-Henonin</name></author><author><name sortKey="Bravo, J" uniqKey="Bravo J">J Bravo</name></author><author><name sortKey="Guzman, P" uniqKey="Guzman P">P Guzmán</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Serrano, M" uniqKey="Serrano M">M Serrano</name></author><author><name sortKey="Guzman, P" uniqKey="Guzman P">P Guzmán</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hondo, D" uniqKey="Hondo D">D Hondo</name></author><author><name sortKey="Hase, S" uniqKey="Hase S">S Hase</name></author><author><name sortKey="Kanayama, Y" uniqKey="Kanayama Y">Y Kanayama</name></author><author><name sortKey="Yoshikawa, N" uniqKey="Yoshikawa N">N Yoshikawa</name></author><author><name sortKey="Takenaka, S" uniqKey="Takenaka S">S Takenaka</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Takai, R" uniqKey="Takai R">R Takai</name></author><author><name sortKey="Matsuda, N" uniqKey="Matsuda N">N Matsuda</name></author><author><name sortKey="Nakano, A" uniqKey="Nakano A">A Nakano</name></author><author><name sortKey="Hasegawa, K" uniqKey="Hasegawa K">K Hasegawa</name></author><author><name sortKey="Akimoto, C" uniqKey="Akimoto C">C Akimoto</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ramonell, K" uniqKey="Ramonell K">K Ramonell</name></author><author><name sortKey="Berrocal Lobo, M" uniqKey="Berrocal Lobo M">M Berrocal-Lobo</name></author><author><name sortKey="Koh, S" uniqKey="Koh S">S Koh</name></author><author><name sortKey="Wan, J" uniqKey="Wan J">J Wan</name></author><author><name sortKey="Edwards, H" uniqKey="Edwards H">H Edwards</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berrocal Lobo, M" uniqKey="Berrocal Lobo M">M Berrocal-Lobo</name></author><author><name sortKey="Stone, S" uniqKey="Stone S">S Stone</name></author><author><name sortKey="Yang, X" uniqKey="Yang X">X Yang</name></author><author><name sortKey="Antico, J" uniqKey="Antico J">J Antico</name></author><author><name sortKey="Callis, J" uniqKey="Callis J">J Callis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ni, X" uniqKey="Ni X">X Ni</name></author><author><name sortKey="Tian, Z" uniqKey="Tian Z">Z Tian</name></author><author><name sortKey="Liu, J" uniqKey="Liu J">J Liu</name></author><author><name sortKey="Song, B" uniqKey="Song B">B Song</name></author><author><name sortKey="Xie, C" uniqKey="Xie C">C Xie</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lin, Ss" uniqKey="Lin S">SS Lin</name></author><author><name sortKey="Martin, R" uniqKey="Martin R">R Martin</name></author><author><name sortKey="Mongrand, S" uniqKey="Mongrand S">S Mongrand</name></author><author><name sortKey="Vandenabeele, S" uniqKey="Vandenabeele S">S Vandenabeele</name></author><author><name sortKey="Chen, Kc" uniqKey="Chen K">KC Chen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, H" uniqKey="Liu H">H Liu</name></author><author><name sortKey="Zhang, H" uniqKey="Zhang H">H Zhang</name></author><author><name sortKey="Yang, Y" uniqKey="Yang Y">Y Yang</name></author><author><name sortKey="Li, G" uniqKey="Li G">G Li</name></author><author><name sortKey="Wang, X" uniqKey="Wang X">X Wang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mukoko Bopopi, J" uniqKey="Mukoko Bopopi J">J Mukoko Bopopi</name></author><author><name sortKey="Vandeputte, Om" uniqKey="Vandeputte O">OM Vandeputte</name></author><author><name sortKey="Himanen, K" uniqKey="Himanen K">K Himanen</name></author><author><name sortKey="Mol, A" uniqKey="Mol A">A Mol</name></author><author><name sortKey="Vaessen, Q" uniqKey="Vaessen Q">Q Vaessen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Karlowski, Wm" uniqKey="Karlowski W">WM Karlowski</name></author><author><name sortKey="Hirsch, Am" uniqKey="Hirsch A">AM Hirsch</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Azevedo, J" uniqKey="Azevedo J">J Azevedo</name></author><author><name sortKey="Courtois, F" uniqKey="Courtois F">F Courtois</name></author><author><name sortKey="Hakimi, Ma" uniqKey="Hakimi M">MA Hakimi</name></author><author><name sortKey="Demarsy, E" uniqKey="Demarsy E">E Demarsy</name></author><author><name sortKey="Lagrange, T" uniqKey="Lagrange T">T Lagrange</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sato, T" uniqKey="Sato T">T Sato</name></author><author><name sortKey="Maekawa, S" uniqKey="Maekawa S">S Maekawa</name></author><author><name sortKey="Yasuda, S" uniqKey="Yasuda S">S Yasuda</name></author><author><name sortKey="Sonoda, Y" uniqKey="Sonoda Y">Y Sonoda</name></author><author><name sortKey="Katoh, E" uniqKey="Katoh E">E Katoh</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Koiwai, H" uniqKey="Koiwai H">H Koiwai</name></author><author><name sortKey="Tagiri, A" uniqKey="Tagiri A">A Tagiri</name></author><author><name sortKey="Katoh, S" uniqKey="Katoh S">S Katoh</name></author><author><name sortKey="Katoh, E" uniqKey="Katoh E">E Katoh</name></author><author><name sortKey="Ichikawa, H" uniqKey="Ichikawa H">H Ichikawa</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pagnussat, Gc" uniqKey="Pagnussat G">GC Pagnussat</name></author><author><name sortKey="Yu, Hj" uniqKey="Yu H">HJ Yu</name></author><author><name sortKey="Ngo, Qa" uniqKey="Ngo Q">QA Ngo</name></author><author><name sortKey="Rajani, S" uniqKey="Rajani S">S Rajani</name></author><author><name sortKey="Mayalagu, S" uniqKey="Mayalagu S">S Mayalagu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Morris, K" uniqKey="Morris K">K Morris</name></author><author><name sortKey="Thornber, S" uniqKey="Thornber S">S Thornber</name></author><author><name sortKey="Codrai, L" uniqKey="Codrai L">L Codrai</name></author><author><name sortKey="Richardson, C" uniqKey="Richardson C">C Richardson</name></author><author><name sortKey="Craig, A" uniqKey="Craig A">A Craig</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Van De Peer, Y" uniqKey="Van De Peer Y">Y Van de Peer</name></author><author><name sortKey="Maere, S" uniqKey="Maere S">S Maere</name></author><author><name sortKey="Meyer, A" uniqKey="Meyer A">A Meyer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cannon, Sb" uniqKey="Cannon S">SB Cannon</name></author><author><name sortKey="Mitra, A" uniqKey="Mitra A">A Mitra</name></author><author><name sortKey="Baumgarten, A" uniqKey="Baumgarten A">A Baumgarten</name></author><author><name sortKey="Young, Nd" uniqKey="Young N">ND Young</name></author><author><name sortKey="May, G" uniqKey="May G">G May</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Davies, Tj" uniqKey="Davies T">TJ Davies</name></author><author><name sortKey="Barraclough, Tg" uniqKey="Barraclough T">TG Barraclough</name></author><author><name sortKey="Chase, Mw" uniqKey="Chase M">MW Chase</name></author><author><name sortKey="Soltis, Ps" uniqKey="Soltis P">PS Soltis</name></author><author><name sortKey="Soltis, De" uniqKey="Soltis D">DE Soltis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wikstrom, N" uniqKey="Wikstrom N">N Wikström</name></author><author><name sortKey="Savolainen, V" uniqKey="Savolainen V">V Savolainen</name></author><author><name sortKey="Chase, Mw" uniqKey="Chase M">MW Chase</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Krogh, A" uniqKey="Krogh A">A Krogh</name></author><author><name sortKey="Larsson, B" uniqKey="Larsson B">B Larsson</name></author><author><name sortKey="Von Heijne, G" uniqKey="Von Heijne G">G Von Heijne</name></author><author><name sortKey="Sonnhammer, Ell" uniqKey="Sonnhammer E">ELL Sonnhammer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Katoh, S" uniqKey="Katoh S">S Katoh</name></author><author><name sortKey="Hong, C" uniqKey="Hong C">C Hong</name></author><author><name sortKey="Tsunoda, Y" uniqKey="Tsunoda Y">Y Tsunoda</name></author><author><name sortKey="Murata, K" uniqKey="Murata K">K Murata</name></author><author><name sortKey="Takai, R" uniqKey="Takai R">R Takai</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Katoh, S" uniqKey="Katoh S">S Katoh</name></author><author><name sortKey="Tsunoda, Y" uniqKey="Tsunoda Y">Y Tsunoda</name></author><author><name sortKey="Murata, K" uniqKey="Murata K">K Murata</name></author><author><name sortKey="Minami, E" uniqKey="Minami E">E Minami</name></author><author><name sortKey="Katoh, E" uniqKey="Katoh E">E Katoh</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Talavera, G" uniqKey="Talavera G">G Talavera</name></author><author><name sortKey="Castresana, J" uniqKey="Castresana J">J Castresana</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rizzon, C" uniqKey="Rizzon C">C Rizzon</name></author><author><name sortKey="Ponger, L" uniqKey="Ponger L">L Ponger</name></author><author><name sortKey="Gaut, Bs" uniqKey="Gaut B">BS Gaut</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hanada, K" uniqKey="Hanada K">K Hanada</name></author><author><name sortKey="Zou, C" uniqKey="Zou C">C Zou</name></author><author><name sortKey="Lehti Shiu, Md" uniqKey="Lehti Shiu M">MD Lehti-Shiu</name></author><author><name sortKey="Shinozaki, K" uniqKey="Shinozaki K">K Shinozaki</name></author><author><name sortKey="Shiu, Sh" uniqKey="Shiu S">SH Shiu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Farmer, Lm" uniqKey="Farmer L">LM Farmer</name></author><author><name sortKey="Book, Aj" uniqKey="Book A">AJ Book</name></author><author><name sortKey="Lee, Kh" uniqKey="Lee K">KH Lee</name></author><author><name sortKey="Lin, Yl" uniqKey="Lin Y">YL Lin</name></author><author><name sortKey="Fu, H" uniqKey="Fu H">H Fu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Elsasser, S" uniqKey="Elsasser S">S Elsasser</name></author><author><name sortKey="Finley, D" uniqKey="Finley D">D Finley</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Funakoshi, M" uniqKey="Funakoshi M">M Funakoshi</name></author><author><name sortKey="Sasaki, T" uniqKey="Sasaki T">T Sasaki</name></author><author><name sortKey="Nishimoto, T" uniqKey="Nishimoto T">T Nishimoto</name></author><author><name sortKey="Kobayashi, H" uniqKey="Kobayashi H">H Kobayashi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mah, Al" uniqKey="Mah A">AL Mah</name></author><author><name sortKey="Perry, G" uniqKey="Perry G">G Perry</name></author><author><name sortKey="Smith, Ma" uniqKey="Smith M">MA Smith</name></author><author><name sortKey="Monteiro, Mj" uniqKey="Monteiro M">MJ Monteiro</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bashton, M" uniqKey="Bashton M">M Bashton</name></author><author><name sortKey="Chothia, C" uniqKey="Chothia C">C Chothia</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Apic, G" uniqKey="Apic G">G Apic</name></author><author><name sortKey="Gough, J" uniqKey="Gough J">J Gough</name></author><author><name sortKey="Teichmann, Sa" uniqKey="Teichmann S">SA Teichmann</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hegyi, H" uniqKey="Hegyi H">H Hegyi</name></author><author><name sortKey="Gerstein, M" uniqKey="Gerstein M">M Gerstein</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rensing, Sa" uniqKey="Rensing S">SA Rensing</name></author><author><name sortKey="Lang, D" uniqKey="Lang D">D Lang</name></author><author><name sortKey="Zimmer, Ad" uniqKey="Zimmer A">AD Zimmer</name></author><author><name sortKey="Terry, A" uniqKey="Terry A">A Terry</name></author><author><name sortKey="Salamov, A" uniqKey="Salamov A">A Salamov</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mudge, J" uniqKey="Mudge J">J Mudge</name></author><author><name sortKey="Cannon, Sb" uniqKey="Cannon S">SB Cannon</name></author><author><name sortKey="Kalo, P" uniqKey="Kalo P">P Kalo</name></author><author><name sortKey="Oldroyd, Ged" uniqKey="Oldroyd G">GED Oldroyd</name></author><author><name sortKey="Roe, Ba" uniqKey="Roe B">BA Roe</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Vogel, Jp" uniqKey="Vogel J">JP Vogel</name></author><author><name sortKey="Garvin, Df" uniqKey="Garvin D">DF Garvin</name></author><author><name sortKey="Mockler, Tc" uniqKey="Mockler T">TC Mockler</name></author><author><name sortKey="Schmutz, J" uniqKey="Schmutz J">J Schmutz</name></author><author><name sortKey="Rokhsar, D" uniqKey="Rokhsar D">D Rokhsar</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Soltis, De" uniqKey="Soltis D">DE Soltis</name></author><author><name sortKey="Albert, Va" uniqKey="Albert V">VA Albert</name></author><author><name sortKey="Leebens Mack, J" uniqKey="Leebens Mack J">J Leebens-Mack</name></author><author><name sortKey="Bell, Cd" uniqKey="Bell C">CD Bell</name></author><author><name sortKey="Paterson, Ah" uniqKey="Paterson A">AH Paterson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jaillon, O" uniqKey="Jaillon O">O Jaillon</name></author><author><name sortKey="Aury, Jm" uniqKey="Aury J">JM Aury</name></author><author><name sortKey="Noel, B" uniqKey="Noel B">B Noel</name></author><author><name sortKey="Policriti, A" uniqKey="Policriti A">A Policriti</name></author><author><name sortKey="Clepet, C" uniqKey="Clepet C">C Clepet</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Vision, Tj" uniqKey="Vision T">TJ Vision</name></author><author><name sortKey="Brown, Dg" uniqKey="Brown D">DG Brown</name></author><author><name sortKey="Tanksley, Sd" uniqKey="Tanksley S">SD Tanksley</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Leister, D" uniqKey="Leister D">D Leister</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhang, L" uniqKey="Zhang L">L Zhang</name></author><author><name sortKey="Gaut, Bs" uniqKey="Gaut B">BS Gaut</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zou, C" uniqKey="Zou C">C Zou</name></author><author><name sortKey="Lehti Shiu, Md" uniqKey="Lehti Shiu M">MD Lehti-Shiu</name></author><author><name sortKey="Thomashow, M" uniqKey="Thomashow M">M Thomashow</name></author><author><name sortKey="Shiu, Sh" uniqKey="Shiu S">SH Shiu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Didier, C" uniqKey="Didier C">C Didier</name></author><author><name sortKey="Broday, L" uniqKey="Broday L">L Broday</name></author><author><name sortKey="Bhoumik, A" uniqKey="Bhoumik A">A Bhoumik</name></author><author><name sortKey="Israeli, S" uniqKey="Israeli S">S Israeli</name></author><author><name sortKey="Takahashi, S" uniqKey="Takahashi S">S Takahashi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kong, Q" uniqKey="Kong Q">Q Kong</name></author><author><name sortKey="Zeng, W" uniqKey="Zeng W">W Zeng</name></author><author><name sortKey="Wu, J" uniqKey="Wu J">J Wu</name></author><author><name sortKey="Hu, W" uniqKey="Hu W">W Hu</name></author><author><name sortKey="Li, C" uniqKey="Li C">C Li</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yu, F" uniqKey="Yu F">F Yu</name></author><author><name sortKey="Zhou, J" uniqKey="Zhou J">J Zhou</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yoshida, K" uniqKey="Yoshida K">K Yoshida</name></author><author><name sortKey="Watanabe, M" uniqKey="Watanabe M">M Watanabe</name></author><author><name sortKey="Hatakeyama, S" uniqKey="Hatakeyama S">S Hatakeyama</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Peng, Z" uniqKey="Peng Z">Z Peng</name></author><author><name sortKey="Shi, T" uniqKey="Shi T">T Shi</name></author><author><name sortKey="Ma, D" uniqKey="Ma D">D Ma</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ficklin, Mb" uniqKey="Ficklin M">MB Ficklin</name></author><author><name sortKey="Zhao, S" uniqKey="Zhao S">S Zhao</name></author><author><name sortKey="Feng, G" uniqKey="Feng G">G Feng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Woznik, M" uniqKey="Woznik M">M Woznik</name></author><author><name sortKey="Rodner, C" uniqKey="Rodner C">C Rodner</name></author><author><name sortKey="Lemon, K" uniqKey="Lemon K">K Lemon</name></author><author><name sortKey="Rima, B" uniqKey="Rima B">B Rima</name></author><author><name sortKey="Mankertz, A" uniqKey="Mankertz A">A Mankertz</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lim, Pj" uniqKey="Lim P">PJ Lim</name></author><author><name sortKey="Danner, R" uniqKey="Danner R">R Danner</name></author><author><name sortKey="Liang, J" uniqKey="Liang J">J Liang</name></author><author><name sortKey="Doong, H" uniqKey="Doong H">H Doong</name></author><author><name sortKey="Harman, C" uniqKey="Harman C">C Harman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Eddy, Sr" uniqKey="Eddy S">SR Eddy</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Edgar, Rc" uniqKey="Edgar R">RC Edgar</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Thompson, Jd" uniqKey="Thompson J">JD Thompson</name></author><author><name sortKey="Higgins, Dg" uniqKey="Higgins D">DG Higgins</name></author><author><name sortKey="Gibson, Tj" uniqKey="Gibson T">TJ Gibson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Abascal, F" uniqKey="Abascal F">F Abascal</name></author><author><name sortKey="Zardoya, R" uniqKey="Zardoya R">R Zardoya</name></author><author><name sortKey="Posada, D" uniqKey="Posada D">D Posada</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Price, Mn" uniqKey="Price M">MN Price</name></author><author><name sortKey="Dehal, Ps" uniqKey="Dehal P">PS Dehal</name></author><author><name sortKey="Arkin, Ap" uniqKey="Arkin A">AP Arkin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tamura, K" uniqKey="Tamura K">K Tamura</name></author><author><name sortKey="Dudley, J" uniqKey="Dudley J">J Dudley</name></author><author><name sortKey="Nei, M" uniqKey="Nei M">M Nei</name></author><author><name sortKey="Kumar, S" uniqKey="Kumar S">S Kumar</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Shimodaira, H" uniqKey="Shimodaira H">H Shimodaira</name></author><author><name sortKey="Hasegawa, M" uniqKey="Hasegawa M">M Hasegawa</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Letunic, I" uniqKey="Letunic I">I Letunic</name></author><author><name sortKey="Bork, P" uniqKey="Bork P">P Bork</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Letunic, I" uniqKey="Letunic I">I Letunic</name></author><author><name sortKey="Bork, P" uniqKey="Bork P">P Bork</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bailey, Tl" uniqKey="Bailey T">TL Bailey</name></author><author><name sortKey="Gribskov, M" uniqKey="Gribskov M">M Gribskov</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, Q" uniqKey="Liu Q">Q Liu</name></author><author><name sortKey="Li, Mz" uniqKey="Li M">MZ Li</name></author><author><name sortKey="Leibham, D" uniqKey="Leibham D">D Leibham</name></author><author><name sortKey="Cortez, D" uniqKey="Cortez D">D Cortez</name></author><author><name sortKey="Elledge, Sj" uniqKey="Elledge S">SJ Elledge</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list></list><tree><noCountry><name sortKey="Aguilar Henonin, Laura" sort="Aguilar Henonin, Laura" uniqKey="Aguilar Henonin L" first="Laura" last="Aguilar-Henonin">Laura Aguilar-Henonin</name><name sortKey="Aguilar Hernandez, Victor" sort="Aguilar Hernandez, Victor" uniqKey="Aguilar Hernandez V" first="Victor" last="Aguilar-Hernández">Victor Aguilar-Hernández</name><name sortKey="Guzman, Plinio" sort="Guzman, Plinio" uniqKey="Guzman P" 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