Large impact of the apoplast on somatic embryogenesis in Cyclamen persicum offers possibilities for improved developmental control in vitro
Identifieur interne : 001A69 ( Main/Merge ); précédent : 001A68; suivant : 001A70Large impact of the apoplast on somatic embryogenesis in Cyclamen persicum offers possibilities for improved developmental control in vitro
Auteurs : Claudia Hoenemann [Allemagne] ; Sandra Richardt [Allemagne] ; Katja Krüger [Allemagne] ; Andreas D. Zimmer [Allemagne] ; Annette Hohe [Allemagne] ; Stefan A. Rensing [Allemagne]Source :
- BMC Plant Biology [ 1471-2229 ] ; 2010.
Abstract
Clonal propagation is highly desired especially for valuable horticultural crops. The method with the potentially highest multiplication rate is regeneration via somatic embryogenesis. However, this mode of propagation is often hampered by the occurrence of developmental aberrations and non-embryogenic callus. Therefore, the developmental process of somatic embryogenesis was analysed in the ornamental crop
The analysis was based on a cDNA microarray representing 1,216 transcripts and was exemplarily validated by realtime PCR. For this purpose relative transcript abundances of homologues of a putative receptor kinase, two different glutathione S-transferases (GST), a xyloglucan endotransglycosylase (XET) and a peroxidase (POX) were quantitatively measured by realtime PCR for three different comparisons. In total, 417 genes were found to be differentially expressed. Gene Ontology annotation revealed that transcripts coding for enzymes that are active in the extracellular compartment (apoplast) were significantly overrepresented in several comparisons. The expression profiling results are underpinned by thorough histological analyses of somatic and zygotic embryos.
The putative underlying physiological processes are discussed and hypotheses on improvement of the protocol for
Url:
DOI: 10.1186/1471-2229-10-77
PubMed: 20426818
PubMed Central: 3095351
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Large impact of the apoplast on somatic embryogenesis in <italic>Cyclamen persicum </italic>offers possibilities for improved developmental control <italic>in vitro</italic></title><author><name sortKey="Hoenemann, Claudia" sort="Hoenemann, Claudia" uniqKey="Hoenemann C" first="Claudia" last="Hoenemann">Claudia Hoenemann</name><affiliation wicri:level="1"><nlm:aff id="I1">Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt</wicri:regionArea><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion></affiliation></author><author><name sortKey="Richardt, Sandra" sort="Richardt, Sandra" uniqKey="Richardt S" first="Sandra" last="Richardt">Sandra Richardt</name><affiliation wicri:level="3"><nlm:aff id="I2">University of Freiburg, Faculty of Biology, Hauptstrasse 1, 79104 Freiburg, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>University of Freiburg, Faculty of Biology, Hauptstrasse 1, 79104 Freiburg</wicri:regionArea><placeName><region type="land" nuts="1">Bade-Wurtemberg</region><region type="district" nuts="2">District de Fribourg-en-Brisgau</region><settlement type="city">Fribourg-en-Brisgau</settlement></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I3">QIAGEN GmbH, Qiagenstrasse 1, D-40724 Hilden, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>QIAGEN GmbH, Qiagenstrasse 1, D-40724 Hilden</wicri:regionArea><wicri:noRegion>40724 Hilden</wicri:noRegion><wicri:noRegion>40724 Hilden</wicri:noRegion><wicri:noRegion>D-40724 Hilden</wicri:noRegion></affiliation></author><author><name sortKey="Kruger, Katja" sort="Kruger, Katja" uniqKey="Kruger K" first="Katja" last="Krüger">Katja Krüger</name><affiliation wicri:level="1"><nlm:aff id="I1">Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt</wicri:regionArea><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion></affiliation></author><author><name sortKey="Zimmer, Andreas D" sort="Zimmer, Andreas D" uniqKey="Zimmer A" first="Andreas D" last="Zimmer">Andreas D. Zimmer</name><affiliation wicri:level="3"><nlm:aff id="I4">University of Freiburg, Faculty of Biology, Plant Biotechnology, Schaenzlestrasse 1, 79104 Freiburg, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>University of Freiburg, Faculty of Biology, Plant Biotechnology, Schaenzlestrasse 1, 79104 Freiburg</wicri:regionArea><placeName><region type="land" nuts="1">Bade-Wurtemberg</region><region type="district" nuts="2">District de Fribourg-en-Brisgau</region><settlement type="city">Fribourg-en-Brisgau</settlement></placeName></affiliation></author><author><name sortKey="Hohe, Annette" sort="Hohe, Annette" uniqKey="Hohe A" first="Annette" last="Hohe">Annette Hohe</name><affiliation wicri:level="1"><nlm:aff id="I1">Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt</wicri:regionArea><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion></affiliation></author><author><name sortKey="Rensing, Stefan A" sort="Rensing, Stefan A" uniqKey="Rensing S" first="Stefan A" last="Rensing">Stefan A. Rensing</name><affiliation wicri:level="3"><nlm:aff id="I2">University of Freiburg, Faculty of Biology, Hauptstrasse 1, 79104 Freiburg, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>University of Freiburg, Faculty of Biology, Hauptstrasse 1, 79104 Freiburg</wicri:regionArea><placeName><region type="land" nuts="1">Bade-Wurtemberg</region><region type="district" nuts="2">District de Fribourg-en-Brisgau</region><settlement type="city">Fribourg-en-Brisgau</settlement></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">20426818</idno><idno type="pmc">3095351</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3095351</idno><idno type="RBID">PMC:3095351</idno><idno type="doi">10.1186/1471-2229-10-77</idno><date when="2010">2010</date><idno type="wicri:Area/Pmc/Corpus">000E25</idno><idno type="wicri:Area/Pmc/Curation">000E24</idno><idno type="wicri:Area/Pmc/Checkpoint">000F39</idno><idno type="wicri:Area/Ncbi/Merge">000B66</idno><idno type="wicri:Area/Ncbi/Curation">000B66</idno><idno type="wicri:Area/Ncbi/Checkpoint">000B66</idno><idno type="wicri:Area/Main/Merge">001A69</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Large impact of the apoplast on somatic embryogenesis in <italic>Cyclamen persicum </italic>offers possibilities for improved developmental control <italic>in vitro</italic></title><author><name sortKey="Hoenemann, Claudia" sort="Hoenemann, Claudia" uniqKey="Hoenemann C" first="Claudia" last="Hoenemann">Claudia Hoenemann</name><affiliation wicri:level="1"><nlm:aff id="I1">Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt</wicri:regionArea><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion></affiliation></author><author><name sortKey="Richardt, Sandra" sort="Richardt, Sandra" uniqKey="Richardt S" first="Sandra" last="Richardt">Sandra Richardt</name><affiliation wicri:level="3"><nlm:aff id="I2">University of Freiburg, Faculty of Biology, Hauptstrasse 1, 79104 Freiburg, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>University of Freiburg, Faculty of Biology, Hauptstrasse 1, 79104 Freiburg</wicri:regionArea><placeName><region type="land" nuts="1">Bade-Wurtemberg</region><region type="district" nuts="2">District de Fribourg-en-Brisgau</region><settlement type="city">Fribourg-en-Brisgau</settlement></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I3">QIAGEN GmbH, Qiagenstrasse 1, D-40724 Hilden, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>QIAGEN GmbH, Qiagenstrasse 1, D-40724 Hilden</wicri:regionArea><wicri:noRegion>40724 Hilden</wicri:noRegion><wicri:noRegion>40724 Hilden</wicri:noRegion><wicri:noRegion>D-40724 Hilden</wicri:noRegion></affiliation></author><author><name sortKey="Kruger, Katja" sort="Kruger, Katja" uniqKey="Kruger K" first="Katja" last="Krüger">Katja Krüger</name><affiliation wicri:level="1"><nlm:aff id="I1">Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt</wicri:regionArea><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion></affiliation></author><author><name sortKey="Zimmer, Andreas D" sort="Zimmer, Andreas D" uniqKey="Zimmer A" first="Andreas D" last="Zimmer">Andreas D. Zimmer</name><affiliation wicri:level="3"><nlm:aff id="I4">University of Freiburg, Faculty of Biology, Plant Biotechnology, Schaenzlestrasse 1, 79104 Freiburg, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>University of Freiburg, Faculty of Biology, Plant Biotechnology, Schaenzlestrasse 1, 79104 Freiburg</wicri:regionArea><placeName><region type="land" nuts="1">Bade-Wurtemberg</region><region type="district" nuts="2">District de Fribourg-en-Brisgau</region><settlement type="city">Fribourg-en-Brisgau</settlement></placeName></affiliation></author><author><name sortKey="Hohe, Annette" sort="Hohe, Annette" uniqKey="Hohe A" first="Annette" last="Hohe">Annette Hohe</name><affiliation wicri:level="1"><nlm:aff id="I1">Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Leibniz-Institute of Vegetable and Ornamental Crops (IGZ), Department Plant Propagation, Kuehnhaeuser Strasse 101, 99189 Erfurt</wicri:regionArea><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion><wicri:noRegion>99189 Erfurt</wicri:noRegion></affiliation></author><author><name sortKey="Rensing, Stefan A" sort="Rensing, Stefan A" uniqKey="Rensing S" first="Stefan A" last="Rensing">Stefan A. Rensing</name><affiliation wicri:level="3"><nlm:aff id="I2">University of Freiburg, Faculty of Biology, Hauptstrasse 1, 79104 Freiburg, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>University of Freiburg, Faculty of Biology, Hauptstrasse 1, 79104 Freiburg</wicri:regionArea><placeName><region type="land" nuts="1">Bade-Wurtemberg</region><region type="district" nuts="2">District de Fribourg-en-Brisgau</region><settlement type="city">Fribourg-en-Brisgau</settlement></placeName></affiliation></author></analytic><series><title level="j">BMC Plant Biology</title><idno type="eISSN">1471-2229</idno><imprint><date when="2010">2010</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><sec><title>Background</title><p>Clonal propagation is highly desired especially for valuable horticultural crops. The method with the potentially highest multiplication rate is regeneration via somatic embryogenesis. However, this mode of propagation is often hampered by the occurrence of developmental aberrations and non-embryogenic callus. Therefore, the developmental process of somatic embryogenesis was analysed in the ornamental crop <italic>Cyclamen persicum </italic>by expression profiling, comparing different developmental stages of embryogenic cell cultures, zygotic vs. somatic embryos and embryogenic vs. non-embryogenic cell cultures.</p></sec><sec><title>Results</title><p>The analysis was based on a cDNA microarray representing 1,216 transcripts and was exemplarily validated by realtime PCR. For this purpose relative transcript abundances of homologues of a putative receptor kinase, two different glutathione S-transferases (GST), a xyloglucan endotransglycosylase (XET) and a peroxidase (POX) were quantitatively measured by realtime PCR for three different comparisons. In total, 417 genes were found to be differentially expressed. Gene Ontology annotation revealed that transcripts coding for enzymes that are active in the extracellular compartment (apoplast) were significantly overrepresented in several comparisons. The expression profiling results are underpinned by thorough histological analyses of somatic and zygotic embryos.</p></sec><sec><title>Conclusions</title><p>The putative underlying physiological processes are discussed and hypotheses on improvement of the protocol for <italic>in vitro </italic>somatic embryogenesis in <italic>Cyclamen persicum </italic>are deduced. A set of physiological markers is proposed for efficient molecular control of the process of somatic embryogenesis in <italic>C. persicum</italic>. The general suitability of expression profiling for the development and improvement of micropropagation methods is discussed.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Preil, W" uniqKey="Preil W">W Preil</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Winkelmann, T" uniqKey="Winkelmann T">T Winkelmann</name></author><author><name sortKey="Geier, T" uniqKey="Geier T">T Geier</name></author><author><name sortKey="Preil, W" uniqKey="Preil W">W Preil</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Reinert, J" uniqKey="Reinert J">J Reinert</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Steward, Fc" uniqKey="Steward F">FC Steward</name></author><author><name sortKey="Mapes, Mo" uniqKey="Mapes M">MO Mapes</name></author><author><name sortKey="Mears, K" uniqKey="Mears K">K 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