Characterization of Four Bifunctional Plant IAM/PAM-Amidohydrolases Capable of Contributing to Auxin Biosynthesis
Identifieur interne : 000B76 ( Main/Merge ); précédent : 000B75; suivant : 000B77Characterization of Four Bifunctional Plant IAM/PAM-Amidohydrolases Capable of Contributing to Auxin Biosynthesis
Auteurs : Beatriz Sánchez-Parra ; Henning Frerigmann ; Marta-Marina Pérez Alonso ; Víctor Carrasco Loba ; Ricarda Jost ; Mathias Hentrich ; Stephan PollmannSource :
- Plants [ 2223-7747 ] ; 2014.
Abstract
Amidases [EC 3.5.1.4] capable of converting indole-3-acetamide (IAM) into the major plant growth hormone indole-3-acetic acid (IAA) are assumed to be involved in auxin
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DOI: 10.3390/plants3030324
PubMed: 27135507
PubMed Central: 4844348
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Characterization of Four Bifunctional Plant IAM/PAM-Amidohydrolases Capable of Contributing to Auxin Biosynthesis </title><author><name sortKey="Sanchez Parra, Beatriz" sort="Sanchez Parra, Beatriz" uniqKey="Sanchez Parra B" first="Beatriz" last="Sánchez-Parra">Beatriz Sánchez-Parra</name><affiliation><nlm:aff id="af1-plants-03-00324">Center for Plant Biotechnology and Genomics (U.P.M.-I.N.I.A.), Technical University Madrid, Montegancedo Campus, Crta. M-40, km 38, 28223 Pozuelo de Alarcón (Madrid), Spain; E-Mails:<email>beatriz.sanchez@upm.es</email> (B.S.-P.);<email>martamarina.perez@upm.es</email> (M.-M.P.A.);<email>victorcarrascoloba@gmail.com</email> (V.C.L.)</nlm:aff></affiliation></author><author><name sortKey="Frerigmann, Henning" sort="Frerigmann, Henning" uniqKey="Frerigmann H" first="Henning" last="Frerigmann">Henning Frerigmann</name><affiliation><nlm:aff id="af2-plants-03-00324">Department of Plant Physiology, Faculty of Biology and Biotechnology, Ruhr-University Bochum, Universitätsstraße 150, 44801 Bochum, Germany; E-Mails:<email>henning.frerigmann@uni-koeln.de</email> (H.F.);<email>mathias.hentrich@rub.de</email> (M.H.)</nlm:aff></affiliation></author><author><name sortKey="Perez Alonso, Marta Marina" sort="Perez Alonso, Marta Marina" uniqKey="Perez Alonso M" first="Marta-Marina" last="Pérez Alonso">Marta-Marina Pérez Alonso</name><affiliation><nlm:aff id="af1-plants-03-00324">Center for Plant Biotechnology and Genomics (U.P.M.-I.N.I.A.), Technical University Madrid, Montegancedo Campus, Crta. M-40, km 38, 28223 Pozuelo de Alarcón (Madrid), Spain; E-Mails:<email>beatriz.sanchez@upm.es</email> (B.S.-P.);<email>martamarina.perez@upm.es</email> (M.-M.P.A.);<email>victorcarrascoloba@gmail.com</email> (V.C.L.)</nlm:aff></affiliation></author><author><name sortKey="Carrasco Loba, Victor" sort="Carrasco Loba, Victor" uniqKey="Carrasco Loba V" first="Víctor" last="Carrasco Loba">Víctor Carrasco Loba</name><affiliation><nlm:aff id="af1-plants-03-00324">Center for Plant Biotechnology and Genomics (U.P.M.-I.N.I.A.), Technical University Madrid, Montegancedo Campus, Crta. M-40, km 38, 28223 Pozuelo de Alarcón (Madrid), Spain; E-Mails:<email>beatriz.sanchez@upm.es</email> (B.S.-P.);<email>martamarina.perez@upm.es</email> (M.-M.P.A.);<email>victorcarrascoloba@gmail.com</email> (V.C.L.)</nlm:aff></affiliation></author><author><name sortKey="Jost, Ricarda" sort="Jost, Ricarda" uniqKey="Jost R" first="Ricarda" last="Jost">Ricarda Jost</name><affiliation><nlm:aff id="af3-plants-03-00324">School of Plant Biology, University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia; E-Mail:<email>ricarda.jost@uwa.edu.au</email></nlm:aff></affiliation></author><author><name sortKey="Hentrich, Mathias" sort="Hentrich, Mathias" uniqKey="Hentrich M" first="Mathias" last="Hentrich">Mathias Hentrich</name><affiliation><nlm:aff id="af2-plants-03-00324">Department of Plant Physiology, Faculty of Biology and Biotechnology, Ruhr-University Bochum, Universitätsstraße 150, 44801 Bochum, Germany; E-Mails:<email>henning.frerigmann@uni-koeln.de</email> (H.F.);<email>mathias.hentrich@rub.de</email> (M.H.)</nlm:aff></affiliation></author><author><name sortKey="Pollmann, Stephan" sort="Pollmann, Stephan" uniqKey="Pollmann S" first="Stephan" last="Pollmann">Stephan Pollmann</name><affiliation><nlm:aff id="af1-plants-03-00324">Center for Plant Biotechnology and Genomics (U.P.M.-I.N.I.A.), Technical University Madrid, Montegancedo Campus, Crta. M-40, km 38, 28223 Pozuelo de Alarcón (Madrid), Spain; E-Mails:<email>beatriz.sanchez@upm.es</email> (B.S.-P.);<email>martamarina.perez@upm.es</email> (M.-M.P.A.);<email>victorcarrascoloba@gmail.com</email> (V.C.L.)</nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">27135507</idno><idno type="pmc">4844348</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4844348</idno><idno type="RBID">PMC:4844348</idno><idno type="doi">10.3390/plants3030324</idno><date when="2014">2014</date><idno type="wicri:Area/Pmc/Corpus">000404</idno><idno type="wicri:Area/Pmc/Curation">000403</idno><idno type="wicri:Area/Pmc/Checkpoint">000888</idno><idno type="wicri:Area/Ncbi/Merge">002011</idno><idno type="wicri:Area/Ncbi/Curation">002011</idno><idno type="wicri:Area/Ncbi/Checkpoint">002011</idno><idno type="wicri:Area/Main/Merge">000B76</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Characterization of Four Bifunctional Plant IAM/PAM-Amidohydrolases Capable of Contributing to Auxin Biosynthesis </title><author><name sortKey="Sanchez Parra, Beatriz" sort="Sanchez Parra, Beatriz" uniqKey="Sanchez Parra B" first="Beatriz" last="Sánchez-Parra">Beatriz Sánchez-Parra</name><affiliation><nlm:aff id="af1-plants-03-00324">Center for Plant Biotechnology and Genomics (U.P.M.-I.N.I.A.), Technical University Madrid, Montegancedo Campus, Crta. M-40, km 38, 28223 Pozuelo de Alarcón (Madrid), Spain; E-Mails:<email>beatriz.sanchez@upm.es</email> (B.S.-P.);<email>martamarina.perez@upm.es</email> (M.-M.P.A.);<email>victorcarrascoloba@gmail.com</email> (V.C.L.)</nlm:aff></affiliation></author><author><name sortKey="Frerigmann, Henning" sort="Frerigmann, Henning" uniqKey="Frerigmann H" first="Henning" last="Frerigmann">Henning Frerigmann</name><affiliation><nlm:aff id="af2-plants-03-00324">Department of Plant Physiology, Faculty of Biology and Biotechnology, Ruhr-University Bochum, Universitätsstraße 150, 44801 Bochum, Germany; E-Mails:<email>henning.frerigmann@uni-koeln.de</email> (H.F.);<email>mathias.hentrich@rub.de</email> (M.H.)</nlm:aff></affiliation></author><author><name sortKey="Perez Alonso, Marta Marina" sort="Perez Alonso, Marta Marina" uniqKey="Perez Alonso M" first="Marta-Marina" last="Pérez Alonso">Marta-Marina Pérez Alonso</name><affiliation><nlm:aff id="af1-plants-03-00324">Center for Plant Biotechnology and Genomics (U.P.M.-I.N.I.A.), Technical University Madrid, Montegancedo Campus, Crta. M-40, km 38, 28223 Pozuelo de Alarcón (Madrid), Spain; E-Mails:<email>beatriz.sanchez@upm.es</email> (B.S.-P.);<email>martamarina.perez@upm.es</email> (M.-M.P.A.);<email>victorcarrascoloba@gmail.com</email> (V.C.L.)</nlm:aff></affiliation></author><author><name sortKey="Carrasco Loba, Victor" sort="Carrasco Loba, Victor" uniqKey="Carrasco Loba V" first="Víctor" last="Carrasco Loba">Víctor Carrasco Loba</name><affiliation><nlm:aff id="af1-plants-03-00324">Center for Plant Biotechnology and Genomics (U.P.M.-I.N.I.A.), Technical University Madrid, Montegancedo Campus, Crta. M-40, km 38, 28223 Pozuelo de Alarcón (Madrid), Spain; E-Mails:<email>beatriz.sanchez@upm.es</email> (B.S.-P.);<email>martamarina.perez@upm.es</email> (M.-M.P.A.);<email>victorcarrascoloba@gmail.com</email> (V.C.L.)</nlm:aff></affiliation></author><author><name sortKey="Jost, Ricarda" sort="Jost, Ricarda" uniqKey="Jost R" first="Ricarda" last="Jost">Ricarda Jost</name><affiliation><nlm:aff id="af3-plants-03-00324">School of Plant Biology, University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia; E-Mail:<email>ricarda.jost@uwa.edu.au</email></nlm:aff></affiliation></author><author><name sortKey="Hentrich, Mathias" sort="Hentrich, Mathias" uniqKey="Hentrich M" first="Mathias" last="Hentrich">Mathias Hentrich</name><affiliation><nlm:aff id="af2-plants-03-00324">Department of Plant Physiology, Faculty of Biology and Biotechnology, Ruhr-University Bochum, Universitätsstraße 150, 44801 Bochum, Germany; E-Mails:<email>henning.frerigmann@uni-koeln.de</email> (H.F.);<email>mathias.hentrich@rub.de</email> (M.H.)</nlm:aff></affiliation></author><author><name sortKey="Pollmann, Stephan" sort="Pollmann, Stephan" uniqKey="Pollmann S" first="Stephan" last="Pollmann">Stephan Pollmann</name><affiliation><nlm:aff id="af1-plants-03-00324">Center for Plant Biotechnology and Genomics (U.P.M.-I.N.I.A.), Technical University Madrid, Montegancedo Campus, Crta. M-40, km 38, 28223 Pozuelo de Alarcón (Madrid), Spain; E-Mails:<email>beatriz.sanchez@upm.es</email> (B.S.-P.);<email>martamarina.perez@upm.es</email> (M.-M.P.A.);<email>victorcarrascoloba@gmail.com</email> (V.C.L.)</nlm:aff></affiliation></author></analytic><series><title level="j">Plants</title><idno type="eISSN">2223-7747</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Amidases [EC 3.5.1.4] capable of converting indole-3-acetamide (IAM) into the major plant growth hormone indole-3-acetic acid (IAA) are assumed to be involved in auxin <italic>de novo</italic> biosynthesis. With the emerging amount of genomics data, it was possible to identify over forty proteins with substantial homology to the already characterized amidases from <italic>Arabidopsis</italic> and tobacco. The observed high conservation of amidase-like proteins throughout the plant kingdom may suggest an important role of theses enzymes in plant development. Here, we report cloning and functional analysis of four, thus far, uncharacterized plant amidases from <italic>Oryza sativa</italic>, <italic>Sorghum bicolor</italic>, <italic>Medicago truncatula</italic>, and <italic>Populus trichocarpa</italic>. Intriguingly, we were able to demonstrate that the examined amidases are also capable of converting phenyl-2-acetamide (PAM) into phenyl-2-acetic acid (PAA), an auxin endogenous to several plant species including <italic>Arabidopsis</italic>. Furthermore, we compared the subcellular localization of the enzymes to that of <italic>Arabidopsis</italic> AMI1, providing further evidence for similar enzymatic functions. Our results point to the presence of a presumably conserved pathway of auxin biosynthesis via IAM, as amidases, both of monocot, and dicot origins, were analyzed.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Thimann, K V" uniqKey="Thimann K">K.V. Thimann</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Davies, P J" uniqKey="Davies P">P.J. Davies</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Slovin, J P" uniqKey="Slovin J">J.P. Slovin</name></author><author><name sortKey="Bandurski, R S" uniqKey="Bandurski R">R.S. Bandurski</name></author><author><name sortKey="Cohen, J D" uniqKey="Cohen J">J.D. Cohen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wightman, F" uniqKey="Wightman F">F. Wightman</name></author><author><name sortKey="Lighty, D L" uniqKey="Lighty D">D.L. 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