Genome-Wide Analysis of Sorbitol Dehydrogenase (SDH) Genes and Their Differential Expression in Two Sand Pear (Pyrus pyrifolia) Fruits
Identifieur interne : 000631 ( Main/Merge ); précédent : 000630; suivant : 000632Genome-Wide Analysis of Sorbitol Dehydrogenase (SDH) Genes and Their Differential Expression in Two Sand Pear (Pyrus pyrifolia) Fruits
Auteurs : Meisong Dai ; Zebin Shi ; Changjie XuSource :
- International Journal of Molecular Sciences [ 1422-0067 ] ; 2015.
Abstract
Through RNA-seq of a mixed fruit sample, fourteen expressed sorbitol dehydrogenase (
Url:
DOI: 10.3390/ijms160613065
PubMed: 26068235
PubMed Central: 4490486
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genome-Wide Analysis of Sorbitol Dehydrogenase (SDH) Genes and Their Differential Expression in Two Sand Pear (<italic>Pyrus pyrifolia</italic>) Fruits</title><author><name sortKey="Dai, Meisong" sort="Dai, Meisong" uniqKey="Dai M" first="Meisong" last="Dai">Meisong Dai</name><affiliation><nlm:aff id="af1-ijms-16-13065">Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, State Agriculture Ministry Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou 310058, China; E-Mail:<email>daimeisong@163.com</email></nlm:aff></affiliation><affiliation><nlm:aff id="af2-ijms-16-13065">Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China; E-Mail:<email>shizebinszb@126.com</email></nlm:aff></affiliation></author><author><name sortKey="Shi, Zebin" sort="Shi, Zebin" uniqKey="Shi Z" first="Zebin" last="Shi">Zebin Shi</name><affiliation><nlm:aff id="af2-ijms-16-13065">Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China; E-Mail:<email>shizebinszb@126.com</email></nlm:aff></affiliation></author><author><name sortKey="Xu, Changjie" sort="Xu, Changjie" uniqKey="Xu C" first="Changjie" last="Xu">Changjie Xu</name><affiliation><nlm:aff id="af1-ijms-16-13065">Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, State Agriculture Ministry Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou 310058, China; E-Mail:<email>daimeisong@163.com</email></nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26068235</idno><idno type="pmc">4490486</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4490486</idno><idno type="RBID">PMC:4490486</idno><idno type="doi">10.3390/ijms160613065</idno><date when="2015">2015</date><idno type="wicri:Area/Pmc/Corpus">000105</idno><idno type="wicri:Area/Pmc/Curation">000105</idno><idno type="wicri:Area/Pmc/Checkpoint">000495</idno><idno type="wicri:Area/Ncbi/Merge">001B72</idno><idno type="wicri:Area/Ncbi/Curation">001B72</idno><idno type="wicri:Area/Ncbi/Checkpoint">001B72</idno><idno type="wicri:Area/Main/Merge">000631</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genome-Wide Analysis of Sorbitol Dehydrogenase (SDH) Genes and Their Differential Expression in Two Sand Pear (<italic>Pyrus pyrifolia</italic>) Fruits</title><author><name sortKey="Dai, Meisong" sort="Dai, Meisong" uniqKey="Dai M" first="Meisong" last="Dai">Meisong Dai</name><affiliation><nlm:aff id="af1-ijms-16-13065">Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, State Agriculture Ministry Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou 310058, China; E-Mail:<email>daimeisong@163.com</email></nlm:aff></affiliation><affiliation><nlm:aff id="af2-ijms-16-13065">Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China; E-Mail:<email>shizebinszb@126.com</email></nlm:aff></affiliation></author><author><name sortKey="Shi, Zebin" sort="Shi, Zebin" uniqKey="Shi Z" first="Zebin" last="Shi">Zebin Shi</name><affiliation><nlm:aff id="af2-ijms-16-13065">Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China; E-Mail:<email>shizebinszb@126.com</email></nlm:aff></affiliation></author><author><name sortKey="Xu, Changjie" sort="Xu, Changjie" uniqKey="Xu C" first="Changjie" last="Xu">Changjie Xu</name><affiliation><nlm:aff id="af1-ijms-16-13065">Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, State Agriculture Ministry Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou 310058, China; E-Mail:<email>daimeisong@163.com</email></nlm:aff></affiliation></author></analytic><series><title level="j">International Journal of Molecular Sciences</title><idno type="eISSN">1422-0067</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Through RNA-seq of a mixed fruit sample, fourteen expressed sorbitol dehydrogenase (<italic>SDH</italic>) genes have been identified from sand pear (<italic>Pyrus pyrifolia</italic> Nakai). Comparative phylogenetic analysis of these <italic>PpySDHs</italic> with those from other plants supported the closest relationship of sand pear with Chinese white pear (<italic>P. bretschneideri</italic>). The expression levels varied greatly among members, and the strongest six (<italic>PpySDH2</italic>, <italic>PpySDH4</italic>, <italic>PpySDH8</italic>, <italic>PpySDH12</italic>, <italic>PpySDH13</italic> and <italic>PpySDH14</italic>) accounted for 96% of total transcript abundance of <italic>PpySDHs</italic>. Tissue-specific expression of these six members was observed in nine tissues or organs of sand pear, with the greatest abundance found in functional leaf petioles, followed by the flesh of young fruit. Expression patterns of these six <italic>PpySDH</italic> genes during fruit development were analyzed in two sand pear cultivars, “Cuiguan” and “Cuiyu”. Overall, expression of <italic>PpySDHs</italic> peaked twice, first at the fruitlet stage and again at or near harvest. The transcript abundance of <italic>PpySDHs</italic> was higher in “Cuiguan” than in “Cuiyu”, accompanied by a higher content of sugars and higher ratio of fructose to sorbitol maintained in the former cultivar at harvest. In conclusion, it was suggested that multiple members of the <italic>SDH</italic> gene family are possibly involved in sand pear fruit development and sugar accumulation and may affect both the sugar amount and sugar composition.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Stoop, J M H" uniqKey="Stoop J">J.M.H. Stoop</name></author><author><name sortKey="Williamson, J D" uniqKey="Williamson J">J.D. Williamson</name></author><author><name sortKey="Pharr, D M" uniqKey="Pharr D">D.M. Pharr</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kanayama, Y" uniqKey="Kanayama Y">Y. 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Roos</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Villalobos Acu A, M G" uniqKey="Villalobos Acu A M">M.G. Villalobos-Acuña</name></author><author><name sortKey="Biasi, W V" uniqKey="Biasi W">W.V. Biasi</name></author><author><name sortKey="Flores, S" uniqKey="Flores S">S. Flores</name></author><author><name sortKey="Jiang, C Z" uniqKey="Jiang C">C.Z. Jiang</name></author><author><name sortKey="Reid, M S" uniqKey="Reid M">M.S. Reid</name></author><author><name sortKey="Willits, N H" uniqKey="Willits N">N.H. Willits</name></author><author><name sortKey="Mitcham, E J" uniqKey="Mitcham E">E.J. Mitcham</name></author></analytic></biblStruct></listBibl></div1></back></TEI></record>Pour manipuler ce document sous Unix (Dilib)
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