Digital Gene Expression Analysis of Ponkan Mandarin (Citrus reticulata Blanco) in Response to Asia Citrus Psyllid-Vectored Huanglongbing Infection
Identifieur interne : 000252 ( Main/Exploration ); précédent : 000251; suivant : 000253Digital Gene Expression Analysis of Ponkan Mandarin (Citrus reticulata Blanco) in Response to Asia Citrus Psyllid-Vectored Huanglongbing Infection
Auteurs : Yun Zhong ; Chunzhen Cheng ; Bo Jiang [République populaire de Chine] ; Nonghui Jiang [République populaire de Chine] ; Yongyan Zhang ; Minlun Hu [République populaire de Chine] ; Guangyan Zhong [République populaire de Chine]Source :
- International Journal of Molecular Sciences [ 1422-0067 ] ; 2016.
Abstract
Citrus Huanglongbing (HLB), the most destructive citrus disease, can be transmitted by psyllids and diseased budwoods. Although the final symptoms of the two main HLB transmission ways were similar and hard to distinguish, the host responses might be different. In this study, the global gene changes in leaves of ponkan (
Url:
DOI: 10.3390/ijms17071063
PubMed: 27384559
PubMed Central: 4964439
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Digital Gene Expression Analysis of Ponkan Mandarin (<italic>Citrus reticulata</italic> Blanco) in Response to Asia Citrus Psyllid-Vectored Huanglongbing Infection</title><author><name sortKey="Zhong, Yun" sort="Zhong, Yun" uniqKey="Zhong Y" first="Yun" last="Zhong">Yun Zhong</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation></author><author><name sortKey="Cheng, Chunzhen" sort="Cheng, Chunzhen" uniqKey="Cheng C" first="Chunzhen" last="Cheng">Chunzhen Cheng</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation><affiliation><nlm:aff id="af2-ijms-17-01063">Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China;<email>zhyy0425@126.com</email></nlm:aff></affiliation></author><author><name sortKey="Jiang, Bo" sort="Jiang, Bo" uniqKey="Jiang B" first="Bo" last="Jiang">Bo Jiang</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af3-ijms-17-01063">Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Jiang, Nonghui" sort="Jiang, Nonghui" uniqKey="Jiang N" first="Nonghui" last="Jiang">Nonghui Jiang</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> 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China;<email>zhyy0425@126.com</email></nlm:aff></affiliation></author><author><name sortKey="Hu, Minlun" sort="Hu, Minlun" uniqKey="Hu M" first="Minlun" last="Hu">Minlun Hu</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af3-ijms-17-01063">Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Zhong, Guangyan" sort="Zhong, Guangyan" uniqKey="Zhong G" first="Guangyan" last="Zhong">Guangyan Zhong</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af3-ijms-17-01063">Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">27384559</idno><idno type="pmc">4964439</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4964439</idno><idno type="RBID">PMC:4964439</idno><idno type="doi">10.3390/ijms17071063</idno><date when="2016">2016</date><idno type="wicri:Area/Pmc/Corpus">000348</idno><idno type="wicri:Area/Pmc/Curation">000347</idno><idno type="wicri:Area/Pmc/Checkpoint">000207</idno><idno type="wicri:Area/Ncbi/Merge">002100</idno><idno type="wicri:Area/Ncbi/Curation">002100</idno><idno type="wicri:Area/Ncbi/Checkpoint">002100</idno><idno type="wicri:Area/Main/Merge">000252</idno><idno type="wicri:Area/Main/Curation">000252</idno><idno type="wicri:Area/Main/Exploration">000252</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Digital Gene Expression Analysis of Ponkan Mandarin (<italic>Citrus reticulata</italic> Blanco) in Response to Asia Citrus Psyllid-Vectored Huanglongbing Infection</title><author><name sortKey="Zhong, Yun" sort="Zhong, Yun" uniqKey="Zhong Y" first="Yun" last="Zhong">Yun Zhong</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation></author><author><name sortKey="Cheng, Chunzhen" sort="Cheng, Chunzhen" uniqKey="Cheng C" first="Chunzhen" last="Cheng">Chunzhen Cheng</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation><affiliation><nlm:aff id="af2-ijms-17-01063">Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China;<email>zhyy0425@126.com</email></nlm:aff></affiliation></author><author><name sortKey="Jiang, Bo" sort="Jiang, Bo" uniqKey="Jiang B" first="Bo" last="Jiang">Bo Jiang</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af3-ijms-17-01063">Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Jiang, Nonghui" sort="Jiang, Nonghui" uniqKey="Jiang N" first="Nonghui" last="Jiang">Nonghui Jiang</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af3-ijms-17-01063">Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Zhang, Yongyan" sort="Zhang, Yongyan" uniqKey="Zhang Y" first="Yongyan" last="Zhang">Yongyan Zhang</name><affiliation><nlm:aff id="af2-ijms-17-01063">Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China;<email>zhyy0425@126.com</email></nlm:aff></affiliation></author><author><name sortKey="Hu, Minlun" sort="Hu, Minlun" uniqKey="Hu M" first="Minlun" last="Hu">Minlun Hu</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af3-ijms-17-01063">Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Zhong, Guangyan" sort="Zhong, Guangyan" uniqKey="Zhong G" first="Guangyan" last="Zhong">Guangyan Zhong</name><affiliation><nlm:aff id="af1-ijms-17-01063">Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China;<email>zhongyun99cn@163.com</email> (Y.Z.);<email>ld0532cheng@126.com</email> (C.C.);<email>jb-clinnic@webmail.hzau.edu.cn</email> (B.J.);<email>jiangnonghui2002@163.com</email> (N.J.);<email>fanshu2005@163.com</email> (M.H.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af3-ijms-17-01063">Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization Ministry of Agriculture, Guangzhou 510640</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author></analytic><series><title level="j">International Journal of Molecular Sciences</title><idno type="eISSN">1422-0067</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Citrus Huanglongbing (HLB), the most destructive citrus disease, can be transmitted by psyllids and diseased budwoods. Although the final symptoms of the two main HLB transmission ways were similar and hard to distinguish, the host responses might be different. In this study, the global gene changes in leaves of ponkan (<italic>Citrus reticulata</italic>) mandarin trees following psyllid-transmission of HLB were analyzed at the early symptomatic stage (13 weeks post inoculation, wpi) and late symptomatic stage (26 wpi) using digital gene expression (DGE) profiling. At 13 wpi, 2452 genes were downregulated while only 604 genes were upregulated in HLB infected ponkan leaves but no pathway enrichment was identified. Gene function analysis showed impairment in defense at the early stage of infection. At late stage of 26 wpi, however, differentially expressed genes (DEGs) involved in carbohydrate metabolism, plant defense, hormone signaling, secondary metabolism, transcription regulation were overwhelmingly upregulated, indicating that the defense reactions were eventually activated. The results indicated that HLB bacterial infection significantly influenced ponkan gene expression, and a delayed response of the host to the fast growing bacteria might be responsible for its failure in fighting against the bacteria.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Lin, K H" uniqKey="Lin K">K.H. Lin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bove, J M" uniqKey="Bove J">J.M. Bové</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dutt, M" uniqKey="Dutt M">M. Dutt</name></author><author><name sortKey="Barthe, G" uniqKey="Barthe G">G. Barthe</name></author><author><name sortKey="Irey, M" uniqKey="Irey M">M. Irey</name></author><author><name sortKey="Grosser, J" uniqKey="Grosser J">J. Grosser</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Halbert, S E" uniqKey="Halbert S">S.E. 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Stewart</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>République populaire de Chine</li></country><region><li>Guangdong</li></region><settlement><li>Jiangmen</li></settlement></list><tree><noCountry><name sortKey="Cheng, Chunzhen" sort="Cheng, Chunzhen" uniqKey="Cheng C" first="Chunzhen" last="Cheng">Chunzhen Cheng</name><name sortKey="Zhang, Yongyan" sort="Zhang, Yongyan" uniqKey="Zhang Y" first="Yongyan" last="Zhang">Yongyan Zhang</name><name sortKey="Zhong, Yun" sort="Zhong, Yun" uniqKey="Zhong Y" first="Yun" last="Zhong">Yun Zhong</name></noCountry><country name="République populaire de Chine"><region name="Guangdong"><name sortKey="Jiang, Bo" sort="Jiang, Bo" uniqKey="Jiang B" first="Bo" last="Jiang">Bo Jiang</name></region><name sortKey="Hu, Minlun" sort="Hu, Minlun" uniqKey="Hu M" first="Minlun" last="Hu">Minlun Hu</name><name sortKey="Jiang, Nonghui" sort="Jiang, Nonghui" uniqKey="Jiang N" first="Nonghui" last="Jiang">Nonghui Jiang</name><name sortKey="Zhong, Guangyan" sort="Zhong, Guangyan" uniqKey="Zhong G" first="Guangyan" last="Zhong">Guangyan Zhong</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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