Genome-wide identification of SSR and SNP markers from the non-heading Chinese cabbage for comparative genomic analyses
Identifieur interne : 000619 ( Main/Exploration ); précédent : 000618; suivant : 000620Genome-wide identification of SSR and SNP markers from the non-heading Chinese cabbage for comparative genomic analyses
Auteurs : Xiaoming Song [République populaire de Chine] ; Tingting Ge [République populaire de Chine] ; Ying Li [République populaire de Chine] ; Xilin Hou [République populaire de Chine]Source :
- BMC Genomics [ 1471-2164 ] ; 2015.
Abstract
Non-heading Chinese cabbage (NHCC), belonging to
A total of 20,836 simple sequence repeats (SSRs) were detected in NHCC, containing repeat types from mononucleotide to nonanucleotide. The average density was 62.93 SSRs/Mb. In gene regions, 5,435 SSRs were identified in 4,569 genes. A total of 5,008 primer pairs were designed, and 74 were randomly selected for validation. Among these, 60 (81.08%) were polymorphic in 18
This is the first systematic and comprehensive analysis and identification of SSRs in NHCC and 17 species. The development of a large number of SNP and SSR markers was successfully achieved for NHCC. These novel markers are valuable for constructing genetic linkage maps, comparative genome analysis, quantitative trait locus (QTL) mapping, genome-wide association studies, and marker-assisted selection in NHCC breeding system research.
The online version of this article (doi:10.1186/s12864-015-1534-0) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1186/s12864-015-1534-0
PubMed: 25908429
PubMed Central: 4408590
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 000583
- to stream Pmc, to step Curation: 000582
- to stream Pmc, to step Checkpoint: 000484
- to stream Ncbi, to step Merge: 001B03
- to stream Ncbi, to step Curation: 001B03
- to stream Ncbi, to step Checkpoint: 001B03
- to stream Main, to step Merge: 000619
- to stream Main, to step Curation: 000619
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genome-wide identification of SSR and SNP markers from the non-heading Chinese cabbage for comparative genomic analyses</title><author><name sortKey="Song, Xiaoming" sort="Song, Xiaoming" uniqKey="Song X" first="Xiaoming" last="Song">Xiaoming Song</name><affiliation wicri:level="1"><nlm:aff id="Aff1">State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing</wicri:regionArea><wicri:noRegion>Nanjing</wicri:noRegion></affiliation></author><author><name sortKey="Ge, Tingting" sort="Ge, Tingting" uniqKey="Ge T" first="Tingting" last="Ge">Tingting Ge</name><affiliation wicri:level="1"><nlm:aff id="Aff1">State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing</wicri:regionArea><wicri:noRegion>Nanjing</wicri:noRegion></affiliation></author><author><name sortKey="Li, Ying" sort="Li, Ying" uniqKey="Li Y" first="Ying" last="Li">Ying Li</name><affiliation wicri:level="1"><nlm:aff id="Aff1">State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing</wicri:regionArea><wicri:noRegion>Nanjing</wicri:noRegion></affiliation></author><author><name sortKey="Hou, Xilin" sort="Hou, Xilin" uniqKey="Hou X" first="Xilin" last="Hou">Xilin Hou</name><affiliation wicri:level="1"><nlm:aff id="Aff1">State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing</wicri:regionArea><wicri:noRegion>Nanjing</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">25908429</idno><idno type="pmc">4408590</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4408590</idno><idno type="RBID">PMC:4408590</idno><idno type="doi">10.1186/s12864-015-1534-0</idno><date when="2015">2015</date><idno type="wicri:Area/Pmc/Corpus">000583</idno><idno type="wicri:Area/Pmc/Curation">000582</idno><idno type="wicri:Area/Pmc/Checkpoint">000484</idno><idno type="wicri:Area/Ncbi/Merge">001B03</idno><idno type="wicri:Area/Ncbi/Curation">001B03</idno><idno type="wicri:Area/Ncbi/Checkpoint">001B03</idno><idno type="wicri:Area/Main/Merge">000619</idno><idno type="wicri:Area/Main/Curation">000619</idno><idno type="wicri:Area/Main/Exploration">000619</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genome-wide identification of SSR and SNP markers from the non-heading Chinese cabbage for comparative genomic analyses</title><author><name sortKey="Song, Xiaoming" sort="Song, Xiaoming" uniqKey="Song X" first="Xiaoming" last="Song">Xiaoming Song</name><affiliation wicri:level="1"><nlm:aff id="Aff1">State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing</wicri:regionArea><wicri:noRegion>Nanjing</wicri:noRegion></affiliation></author><author><name sortKey="Ge, Tingting" sort="Ge, Tingting" uniqKey="Ge T" first="Tingting" last="Ge">Tingting Ge</name><affiliation wicri:level="1"><nlm:aff id="Aff1">State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing</wicri:regionArea><wicri:noRegion>Nanjing</wicri:noRegion></affiliation></author><author><name sortKey="Li, Ying" sort="Li, Ying" uniqKey="Li Y" first="Ying" last="Li">Ying Li</name><affiliation wicri:level="1"><nlm:aff id="Aff1">State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing</wicri:regionArea><wicri:noRegion>Nanjing</wicri:noRegion></affiliation></author><author><name sortKey="Hou, Xilin" sort="Hou, Xilin" uniqKey="Hou X" first="Xilin" last="Hou">Xilin Hou</name><affiliation wicri:level="1"><nlm:aff id="Aff1">State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Crop Genetics and Germplasm Enhancement/Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing</wicri:regionArea><wicri:noRegion>Nanjing</wicri:noRegion></affiliation></author></analytic><series><title level="j">BMC Genomics</title><idno type="eISSN">1471-2164</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><sec><title>Background</title><p>Non-heading Chinese cabbage (NHCC), belonging to <italic>Brassica</italic>, is an important leaf vegetable in Asia. Although genetic analyses have been performed through conventional selection and breeding efforts, the domestication history of NHCC and the genetics underlying its morphological diversity remain unclear. Thus, the reliable molecular markers representative of the whole genome are required for molecular-assisted selection in NHCC.</p></sec><sec><title>Results</title><p>A total of 20,836 simple sequence repeats (SSRs) were detected in NHCC, containing repeat types from mononucleotide to nonanucleotide. The average density was 62.93 SSRs/Mb. In gene regions, 5,435 SSRs were identified in 4,569 genes. A total of 5,008 primer pairs were designed, and 74 were randomly selected for validation. Among these, 60 (81.08%) were polymorphic in 18 <italic>Cruciferae</italic>. The number of polymorphic bands ranged from two to five, with an average of 2.70 for each primer. The average values of the polymorphism information content, observed heterozygosity, Hardy-Weinberg equilibrium, and Shannon’s information index were 0.2970, 0.4136, 0.5706, and 0.5885, respectively. Four clusters were classified according to the unweighted pair-group method with arithmetic average cluster analysis of 18 genotypes. In addition, a total of 1,228,979 single nucleotide polymorphisms (SNPs) were identified in the NHCC through a comparison with the genome of Chinese cabbage, and the average SNP density in the whole genome was 4.33/Kb. The number of SNPs ranged from 341,939 to 591,586 in the 10 accessions, and the average heterozygous SNPs ratio was ~42.53%. All analyses showed these markers were high quality and reliable. Therefore, they could be used in the construction of a linkage map and for genetic diversity studies for NHCC in future.</p></sec><sec><title>Conclusions</title><p>This is the first systematic and comprehensive analysis and identification of SSRs in NHCC and 17 species. The development of a large number of SNP and SSR markers was successfully achieved for NHCC. These novel markers are valuable for constructing genetic linkage maps, comparative genome analysis, quantitative trait locus (QTL) mapping, genome-wide association studies, and marker-assisted selection in NHCC breeding system research.</p></sec><sec><title>Electronic supplementary material</title><p>The online version of this article (doi:10.1186/s12864-015-1534-0) contains supplementary material, which is available to authorized users.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Franzke, A" uniqKey="Franzke A">A Franzke</name></author><author><name sortKey="Lysak, Ma" uniqKey="Lysak M">MA Lysak</name></author><author><name sortKey="Al Shehbaz, Ia" uniqKey="Al Shehbaz I">IA Al-Shehbaz</name></author><author><name sortKey="Koch, Ma" uniqKey="Koch M">MA Koch</name></author><author><name sortKey="Mummenhoff, K" uniqKey="Mummenhoff K">K Mummenhoff</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cheng, F" uniqKey="Cheng F">F Cheng</name></author><author><name sortKey="Liu, S" uniqKey="Liu S">S Liu</name></author><author><name sortKey="Wu, J" uniqKey="Wu J">J Wu</name></author><author><name sortKey="Fang, L" uniqKey="Fang L">L Fang</name></author><author><name sortKey="Sun, S" uniqKey="Sun S">S Sun</name></author><author><name sortKey="Liu, B" uniqKey="Liu B">B Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Choi, Sr" uniqKey="Choi S">SR Choi</name></author><author><name sortKey="Teakle, Gr" uniqKey="Teakle G">GR Teakle</name></author><author><name sortKey="Plaha, P" uniqKey="Plaha P">P Plaha</name></author><author><name sortKey="Kim, Jh" uniqKey="Kim J">JH Kim</name></author><author><name sortKey="Allender, Cj" uniqKey="Allender C">CJ Allender</name></author><author><name sortKey="Beynon, E" uniqKey="Beynon E">E Beynon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, X" uniqKey="Wang X">X Wang</name></author><author><name sortKey="Wang, H" uniqKey="Wang H">H Wang</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author><author><name sortKey="Sun, R" uniqKey="Sun R">R Sun</name></author><author><name sortKey="Wu, J" uniqKey="Wu J">J Wu</name></author><author><name sortKey="Liu, S" uniqKey="Liu S">S Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, H" uniqKey="Chen H">H Chen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Agarwal, M" uniqKey="Agarwal M">M Agarwal</name></author><author><name sortKey="Shrivastava, N" uniqKey="Shrivastava N">N Shrivastava</name></author><author><name sortKey="Padh, H" uniqKey="Padh H">H Padh</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sarwat, M" uniqKey="Sarwat M">M Sarwat</name></author><author><name sortKey="Nabi, G" uniqKey="Nabi G">G Nabi</name></author><author><name sortKey="Das, S" uniqKey="Das S">S Das</name></author><author><name sortKey="Srivastava, Ps" uniqKey="Srivastava P">PS Srivastava</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Marczewski, W" uniqKey="Marczewski W">W Marczewski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kumar, P" uniqKey="Kumar P">P Kumar</name></author><author><name sortKey="Gupta, Vk" uniqKey="Gupta V">VK Gupta</name></author><author><name sortKey="Misra, Ak" uniqKey="Misra A">AK Misra</name></author><author><name sortKey="Modi, Dr" uniqKey="Modi D">DR Modi</name></author><author><name sortKey="Pandey, Bk" uniqKey="Pandey B">BK Pandey</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dekkers, Jc" uniqKey="Dekkers J">JC Dekkers</name></author><author><name sortKey="Hospital, F" uniqKey="Hospital F">F Hospital</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Paterson, Ah" uniqKey="Paterson A">AH Paterson</name></author><author><name sortKey="Bowers, Je" uniqKey="Bowers J">JE Bowers</name></author><author><name sortKey="Burow, Md" uniqKey="Burow M">MD Burow</name></author><author><name sortKey="Draye, X" uniqKey="Draye X">X Draye</name></author><author><name sortKey="Elsik, Cg" uniqKey="Elsik C">CG Elsik</name></author><author><name sortKey="Jiang, Cx" uniqKey="Jiang C">CX Jiang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kucuktas, H" uniqKey="Kucuktas H">H Kucuktas</name></author><author><name sortKey="Wang, S" uniqKey="Wang S">S Wang</name></author><author><name sortKey="Li, P" uniqKey="Li P">P Li</name></author><author><name sortKey="He, C" uniqKey="He C">C He</name></author><author><name sortKey="Xu, P" uniqKey="Xu P">P Xu</name></author><author><name sortKey="Sha, Z" uniqKey="Sha Z">Z Sha</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sebastian, Rl" uniqKey="Sebastian R">RL Sebastian</name></author><author><name sortKey="Howell, Ec" uniqKey="Howell E">EC Howell</name></author><author><name sortKey="King, Gj" uniqKey="King G">GJ King</name></author><author><name sortKey="Marshall, Df" uniqKey="Marshall D">DF Marshall</name></author><author><name sortKey="Kearsey, Mj" uniqKey="Kearsey M">MJ Kearsey</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cheung, Wy" uniqKey="Cheung W">WY Cheung</name></author><author><name sortKey="Champagne, G" uniqKey="Champagne G">G Champagne</name></author><author><name sortKey="Hubert, N" uniqKey="Hubert N">N Hubert</name></author><author><name sortKey="Landry, Bs" uniqKey="Landry B">BS Landry</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Truco, Mj" uniqKey="Truco M">MJ Truco</name></author><author><name sortKey="Quiros, Cf" uniqKey="Quiros C">CF Quiros</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pradhan, Ak" uniqKey="Pradhan A">AK Pradhan</name></author><author><name sortKey="Gupta, V" uniqKey="Gupta V">V Gupta</name></author><author><name sortKey="Mukhopadhyay, A" uniqKey="Mukhopadhyay A">A Mukhopadhyay</name></author><author><name sortKey="Arumugam, N" uniqKey="Arumugam N">N Arumugam</name></author><author><name sortKey="Sodhi, Ys" uniqKey="Sodhi Y">YS Sodhi</name></author><author><name sortKey="Pental, D" uniqKey="Pental D">D Pental</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author><author><name sortKey="Lydiate, Dj" uniqKey="Lydiate D">DJ Lydiate</name></author><author><name sortKey="Parkin, Ia" uniqKey="Parkin I">IA Parkin</name></author><author><name sortKey="Falentin, C" uniqKey="Falentin C">C Falentin</name></author><author><name sortKey="Delourme, R" uniqKey="Delourme R">R Delourme</name></author><author><name sortKey="Carion, Pw" uniqKey="Carion P">PW Carion</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Raman, H" uniqKey="Raman H">H Raman</name></author><author><name sortKey="Raman, R" uniqKey="Raman R">R Raman</name></author><author><name sortKey="Nelson, Mn" uniqKey="Nelson M">MN Nelson</name></author><author><name sortKey="Aslam, Mn" uniqKey="Aslam M">MN Aslam</name></author><author><name sortKey="Rajasekaran, R" uniqKey="Rajasekaran R">R Rajasekaran</name></author><author><name sortKey="Wratten, N" uniqKey="Wratten N">N Wratten</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, Js" uniqKey="Kim J">JS Kim</name></author><author><name sortKey="Chung, Ty" uniqKey="Chung T">TY Chung</name></author><author><name sortKey="King, Gj" uniqKey="King G">GJ King</name></author><author><name sortKey="Jin, M" uniqKey="Jin M">M Jin</name></author><author><name sortKey="Yang, Tj" uniqKey="Yang T">TJ Yang</name></author><author><name sortKey="Jin, Ym" uniqKey="Jin Y">YM Jin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Soengas, P" uniqKey="Soengas P">P Soengas</name></author><author><name sortKey="Hand, P" uniqKey="Hand P">P Hand</name></author><author><name sortKey="Vicente, Jg" uniqKey="Vicente J">JG Vicente</name></author><author><name sortKey="Pole, Jm" uniqKey="Pole J">JM Pole</name></author><author><name sortKey="Pink, Da" uniqKey="Pink D">DA Pink</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cheng, Y" uniqKey="Cheng Y">Y Cheng</name></author><author><name sortKey="Geng, J" uniqKey="Geng J">J Geng</name></author><author><name sortKey="Zhang, J" uniqKey="Zhang J">J Zhang</name></author><author><name sortKey="Wang, Q" uniqKey="Wang Q">Q Wang</name></author><author><name sortKey="Ban, Q" uniqKey="Ban Q">Q Ban</name></author><author><name sortKey="Hou, X" uniqKey="Hou X">X Hou</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Barchi, L" uniqKey="Barchi L">L Barchi</name></author><author><name sortKey="Lanteri, S" uniqKey="Lanteri S">S Lanteri</name></author><author><name sortKey="Portis, E" uniqKey="Portis E">E Portis</name></author><author><name sortKey="Acquadro, A" uniqKey="Acquadro A">A Acquadro</name></author><author><name sortKey="Vale, G" uniqKey="Vale G">G Vale</name></author><author><name sortKey="Toppino, L" uniqKey="Toppino L">L Toppino</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bus, A" uniqKey="Bus A">A Bus</name></author><author><name sortKey="Hecht, J" uniqKey="Hecht J">J Hecht</name></author><author><name sortKey="Huettel, B" uniqKey="Huettel B">B Huettel</name></author><author><name sortKey="Reinhardt, R" uniqKey="Reinhardt R">R Reinhardt</name></author><author><name sortKey="Stich, B" uniqKey="Stich B">B Stich</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Xu, P" uniqKey="Xu P">P Xu</name></author><author><name sortKey="Wu, X" uniqKey="Wu X">X Wu</name></author><author><name sortKey="Wang, B" uniqKey="Wang B">B Wang</name></author><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y Liu</name></author><author><name sortKey="Ehlers, Jd" uniqKey="Ehlers J">JD Ehlers</name></author><author><name sortKey="Close, Tj" uniqKey="Close T">TJ Close</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Blanca, J" uniqKey="Blanca J">J Blanca</name></author><author><name sortKey="Esteras, C" uniqKey="Esteras C">C Esteras</name></author><author><name sortKey="Ziarsolo, P" uniqKey="Ziarsolo P">P Ziarsolo</name></author><author><name sortKey="Perez, D" uniqKey="Perez D">D Perez</name></author><author><name sortKey="Ferna Ndez Pedrosa, V" uniqKey="Ferna Ndez Pedrosa V">V Ferna Ndez-Pedrosa</name></author><author><name sortKey="Collado, C" uniqKey="Collado C">C Collado</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Huang, X" uniqKey="Huang X">X Huang</name></author><author><name sortKey="Wei, X" uniqKey="Wei X">X Wei</name></author><author><name sortKey="Sang, T" uniqKey="Sang T">T Sang</name></author><author><name sortKey="Zhao, Q" uniqKey="Zhao Q">Q Zhao</name></author><author><name sortKey="Feng, Q" uniqKey="Feng Q">Q Feng</name></author><author><name sortKey="Zhao, Y" uniqKey="Zhao Y">Y Zhao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhao, Y" uniqKey="Zhao Y">Y Zhao</name></author><author><name sortKey="Prakash, Cs" uniqKey="Prakash C">CS Prakash</name></author><author><name sortKey="He, G" uniqKey="He G">G He</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gao, Z" uniqKey="Gao Z">Z Gao</name></author><author><name sortKey="Luo, W" uniqKey="Luo W">W Luo</name></author><author><name sortKey="Liu, H" uniqKey="Liu H">H Liu</name></author><author><name sortKey="Zeng, C" uniqKey="Zeng C">C Zeng</name></author><author><name sortKey="Liu, X" uniqKey="Liu X">X Liu</name></author><author><name sortKey="Yi, S" uniqKey="Yi S">S Yi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Srikanth, A" uniqKey="Srikanth A">A Srikanth</name></author><author><name sortKey="Schmid, M" uniqKey="Schmid M">M Schmid</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, H" uniqKey="Wang H">H Wang</name></author><author><name sortKey="Wu, J" uniqKey="Wu J">J Wu</name></author><author><name sortKey="Sun, S" uniqKey="Sun S">S Sun</name></author><author><name sortKey="Liu, B" uniqKey="Liu B">B Liu</name></author><author><name sortKey="Cheng, F" uniqKey="Cheng F">F Cheng</name></author><author><name sortKey="Sun, R" uniqKey="Sun R">R Sun</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Simko, I" uniqKey="Simko I">I Simko</name></author><author><name sortKey="Haynes, Kg" uniqKey="Haynes K">KG Haynes</name></author><author><name sortKey="Jones, Rw" uniqKey="Jones R">RW Jones</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Terol, J" uniqKey="Terol J">J Terol</name></author><author><name sortKey="Naranjo, Ma" uniqKey="Naranjo M">MA Naranjo</name></author><author><name sortKey="Ollitrault, P" uniqKey="Ollitrault P">P Ollitrault</name></author><author><name sortKey="Talon, M" uniqKey="Talon M">M Talon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ramirez, M" uniqKey="Ramirez M">M Ramirez</name></author><author><name sortKey="Graham, Ma" uniqKey="Graham M">MA Graham</name></author><author><name sortKey="Blanco Lopez, L" uniqKey="Blanco Lopez L">L Blanco-Lopez</name></author><author><name sortKey="Silvente, S" uniqKey="Silvente S">S Silvente</name></author><author><name sortKey="Medrano Soto, A" uniqKey="Medrano Soto A">A Medrano-Soto</name></author><author><name sortKey="Blair, Mw" uniqKey="Blair M">MW Blair</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tamura, K" uniqKey="Tamura K">K Tamura</name></author><author><name sortKey="Peterson, D" uniqKey="Peterson D">D Peterson</name></author><author><name sortKey="Peterson, N" uniqKey="Peterson N">N Peterson</name></author><author><name sortKey="Stecher, G" uniqKey="Stecher G">G Stecher</name></author><author><name sortKey="Nei, M" uniqKey="Nei M">M Nei</name></author><author><name sortKey="Kumar, S" uniqKey="Kumar S">S Kumar</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Shi, J" uniqKey="Shi J">J Shi</name></author><author><name sortKey="Huang, S" uniqKey="Huang S">S Huang</name></author><author><name sortKey="Fu, D" uniqKey="Fu D">D Fu</name></author><author><name sortKey="Yu, J" uniqKey="Yu J">J Yu</name></author><author><name sortKey="Wang, X" uniqKey="Wang X">X Wang</name></author><author><name sortKey="Hua, W" uniqKey="Hua W">W Hua</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Han, Jm" uniqKey="Han J">JM Han</name></author><author><name sortKey="Hou, Xl" uniqKey="Hou X">XL Hou</name></author><author><name sortKey="Shi, Gj" uniqKey="Shi G">GJ Shi</name></author><author><name sortKey="Geng, Jf" uniqKey="Geng J">JF Geng</name></author><author><name sortKey="Deng, Xh" uniqKey="Deng X">XH Deng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cavagnaro, Pf" uniqKey="Cavagnaro P">PF Cavagnaro</name></author><author><name sortKey="Senalik, Da" uniqKey="Senalik D">DA Senalik</name></author><author><name sortKey="Yang, L" uniqKey="Yang L">L Yang</name></author><author><name sortKey="Simon, Pw" uniqKey="Simon P">PW Simon</name></author><author><name sortKey="Harkins, Tt" uniqKey="Harkins T">TT Harkins</name></author><author><name sortKey="Kodira, Cd" uniqKey="Kodira C">CD Kodira</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jiao, Y" uniqKey="Jiao Y">Y Jiao</name></author><author><name sortKey="Jia, Hm" uniqKey="Jia H">HM Jia</name></author><author><name sortKey="Li, Xw" uniqKey="Li X">XW Li</name></author><author><name sortKey="Chai, Ml" uniqKey="Chai M">ML Chai</name></author><author><name sortKey="Jia, Hj" uniqKey="Jia H">HJ Jia</name></author><author><name sortKey="Chen, Z" uniqKey="Chen Z">Z Chen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yang, T" uniqKey="Yang T">T Yang</name></author><author><name sortKey="Bao, Sy" uniqKey="Bao S">SY Bao</name></author><author><name sortKey="Ford, R" uniqKey="Ford R">R Ford</name></author><author><name sortKey="Jia, Tj" uniqKey="Jia T">TJ Jia</name></author><author><name sortKey="Guan, Jp" uniqKey="Guan J">JP Guan</name></author><author><name sortKey="He, Yh" uniqKey="He Y">YH He</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Li, R" uniqKey="Li R">R Li</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y Li</name></author><author><name sortKey="Fang, X" uniqKey="Fang X">X Fang</name></author><author><name sortKey="Yang, H" uniqKey="Yang H">H Yang</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author><author><name sortKey="Kristiansen, K" uniqKey="Kristiansen K">K Kristiansen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rozen, S" uniqKey="Rozen S">S Rozen</name></author><author><name sortKey="Skaletsky, H" uniqKey="Skaletsky H">H Skaletsky</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jensen, Rj" uniqKey="Jensen R">RJ Jensen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hampl, V" uniqKey="Hampl V">V Hampl</name></author><author><name sortKey="Pavlicek, A" uniqKey="Pavlicek A">A Pavlicek</name></author><author><name sortKey="Flegr, J" uniqKey="Flegr J">J Flegr</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, K" uniqKey="Liu K">K Liu</name></author><author><name sortKey="Muse, Sv" uniqKey="Muse S">SV Muse</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hubisz, Mj" uniqKey="Hubisz M">MJ Hubisz</name></author><author><name sortKey="Falush, D" uniqKey="Falush D">D Falush</name></author><author><name sortKey="Stephens, M" uniqKey="Stephens M">M Stephens</name></author><author><name sortKey="Pritchard, Jk" uniqKey="Pritchard J">JK Pritchard</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Romualdi, C" uniqKey="Romualdi C">C Romualdi</name></author><author><name sortKey="Bortoluzzi, S" uniqKey="Bortoluzzi S">S Bortoluzzi</name></author><author><name sortKey="D Lessi, F" uniqKey="D Lessi F">F D’Alessi</name></author><author><name sortKey="Danieli, Ga" uniqKey="Danieli G">GA Danieli</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Saldanha, Aj" uniqKey="Saldanha A">AJ Saldanha</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Szklarczyk, D" uniqKey="Szklarczyk D">D Szklarczyk</name></author><author><name sortKey="Franceschini, A" uniqKey="Franceschini A">A Franceschini</name></author><author><name sortKey="Kuhn, M" uniqKey="Kuhn M">M Kuhn</name></author><author><name sortKey="Simonovic, M" uniqKey="Simonovic M">M Simonovic</name></author><author><name sortKey="Roth, A" uniqKey="Roth A">A Roth</name></author><author><name sortKey="Minguez, P" uniqKey="Minguez P">P Minguez</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cline, Ms" uniqKey="Cline M">MS Cline</name></author><author><name sortKey="Smoot, M" uniqKey="Smoot M">M Smoot</name></author><author><name sortKey="Cerami, E" uniqKey="Cerami E">E Cerami</name></author><author><name sortKey="Kuchinsky, A" uniqKey="Kuchinsky A">A Kuchinsky</name></author><author><name sortKey="Landys, N" uniqKey="Landys N">N Landys</name></author><author><name sortKey="Workman, C" uniqKey="Workman C">C Workman</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Song, Xiaoming" sort="Song, Xiaoming" uniqKey="Song X" first="Xiaoming" last="Song">Xiaoming Song</name></noRegion><name sortKey="Ge, Tingting" sort="Ge, Tingting" uniqKey="Ge T" first="Tingting" last="Ge">Tingting Ge</name><name sortKey="Hou, Xilin" sort="Hou, Xilin" uniqKey="Hou X" first="Xilin" last="Hou">Xilin Hou</name><name sortKey="Li, Ying" sort="Li, Ying" uniqKey="Li Y" first="Ying" last="Li">Ying Li</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000619 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000619 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Bois
|area= OrangerV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= PMC:4408590
|texte= Genome-wide identification of SSR and SNP markers from the non-heading Chinese cabbage for comparative genomic analyses
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:25908429" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a OrangerV1
| This area was generated with Dilib version V0.6.25. |  |