Comparative proteomic analysis of somatic embryo maturation in Carica papaya L.
Identifieur interne : 000B57 ( Main/Exploration ); précédent : 000B56; suivant : 000B58Comparative proteomic analysis of somatic embryo maturation in Carica papaya L.
Auteurs : Ellen De Moura Vale [Brésil] ; Angelo Schuabb Heringer [Brésil] ; Tatiana Barroso [Brésil] ; André Teixeira Da Silva Ferreira [Brésil] ; Monique Nunes Da Costa [Brésil] ; Jonas Enrique Aguilar Perales [Brésil] ; Claudete Santa-Catarina [Brésil] ; Vanildo Silveira [Brésil]Source :
- Proteome Science [ 1477-5956 ] ; 2014.
Abstract
Somatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and understanding of different biological responses. In addition, the identification of molecular markers could lead to the optimization of protocols allowing the use of biotechnology for papaya propagation and reproduction. This work aimed to investigate the effects of polyethylene glycol (PEG) on somatic embryo development and the protein expression profile during somatic embryo maturation in papaya (
The maturation treatment supplemented with 6% PEG (PEG6) resulted in the greatest number of somatic embryos and induced differential protein expression compared with cultures grown under the control treatment. Among 135 spots selected for MS/MS analysis, 76 spots were successfully identified, 38 of which were common to both treatments, while 14 spots were unique to the control treatment, and 24 spots were unique to the PEG6 treatment. The identified proteins were assigned to seven categories or were unclassified. The most representative class of proteins observed in the control treatment was associated with the stress response (25.8%), while those under PEG6 treatment were carbohydrate and energy metabolism (18.4%) and the stress response (18.4%).
The differential expression of three proteins (enolase, esterase and ADH3) induced by PEG6 treatment could play an important role in maturation, and these proteins could be characterized as candidate biomarkers of somatic embryogenesis in papaya.
Url:
DOI: 10.1186/1477-5956-12-37
PubMed: 25076862
PubMed Central: 4115220
Affiliations:
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Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602</wicri:regionArea><wicri:noRegion>RJ 28013-602</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">25076862</idno><idno type="pmc">4115220</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4115220</idno><idno type="RBID">PMC:4115220</idno><idno type="doi">10.1186/1477-5956-12-37</idno><date when="2014">2014</date><idno type="wicri:Area/Pmc/Corpus">000B86</idno><idno type="wicri:Area/Pmc/Curation">000B85</idno><idno type="wicri:Area/Pmc/Checkpoint">000875</idno><idno type="wicri:Area/Ncbi/Merge">001782</idno><idno type="wicri:Area/Ncbi/Curation">001782</idno><idno type="wicri:Area/Ncbi/Checkpoint">001782</idno><idno type="wicri:Area/Main/Merge">000B60</idno><idno type="wicri:Area/Main/Curation">000B57</idno><idno type="wicri:Area/Main/Exploration">000B57</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Comparative proteomic analysis of somatic embryo maturation in <italic>Carica papaya</italic> L.</title><author><name sortKey="Vale, Ellen De Moura" sort="Vale, Ellen De Moura" uniqKey="Vale E" first="Ellen De Moura" last="Vale">Ellen De Moura Vale</name><affiliation wicri:level="1"><nlm:aff id="I1">Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil</nlm:aff><country xml:lang="fr">Brésil</country><wicri:regionArea>Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602</wicri:regionArea><wicri:noRegion>RJ 28013-602</wicri:noRegion></affiliation></author><author><name sortKey="Heringer, Angelo Schuabb" sort="Heringer, Angelo Schuabb" uniqKey="Heringer A" first="Angelo Schuabb" last="Heringer">Angelo Schuabb Heringer</name><affiliation wicri:level="1"><nlm:aff id="I1">Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil</nlm:aff><country xml:lang="fr">Brésil</country><wicri:regionArea>Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602</wicri:regionArea><wicri:noRegion>RJ 28013-602</wicri:noRegion></affiliation></author><author><name sortKey="Barroso, Tatiana" sort="Barroso, Tatiana" uniqKey="Barroso T" first="Tatiana" last="Barroso">Tatiana Barroso</name><affiliation wicri:level="1"><nlm:aff id="I1">Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil</nlm:aff><country xml:lang="fr">Brésil</country><wicri:regionArea>Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602</wicri:regionArea><wicri:noRegion>RJ 28013-602</wicri:noRegion></affiliation></author><author><name sortKey="Ferreira, Andre Teixeira Da Silva" sort="Ferreira, Andre Teixeira Da Silva" uniqKey="Ferreira A" first="André Teixeira Da Silva" last="Ferreira">André Teixeira Da Silva Ferreira</name><affiliation wicri:level="2"><nlm:aff id="I2">Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ, Brazil</nlm:aff><country xml:lang="fr">Brésil</country><wicri:regionArea>Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ</wicri:regionArea><placeName><region type="state">État de Rio de Janeiro</region></placeName></affiliation></author><author><name sortKey="Da Costa, Monique Nunes" sort="Da Costa, Monique Nunes" uniqKey="Da Costa M" first="Monique Nunes" last="Da Costa">Monique Nunes Da Costa</name><affiliation wicri:level="2"><nlm:aff id="I2">Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ, Brazil</nlm:aff><country xml:lang="fr">Brésil</country><wicri:regionArea>Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ</wicri:regionArea><placeName><region type="state">État de Rio de Janeiro</region></placeName></affiliation></author><author><name sortKey="Perales, Jonas Enrique Aguilar" sort="Perales, Jonas Enrique Aguilar" uniqKey="Perales J" first="Jonas Enrique Aguilar" last="Perales">Jonas Enrique Aguilar Perales</name><affiliation wicri:level="2"><nlm:aff id="I2">Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ, Brazil</nlm:aff><country xml:lang="fr">Brésil</country><wicri:regionArea>Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ</wicri:regionArea><placeName><region type="state">État de Rio de Janeiro</region></placeName></affiliation></author><author><name sortKey="Santa Catarina, Claudete" sort="Santa Catarina, Claudete" uniqKey="Santa Catarina C" first="Claudete" last="Santa-Catarina">Claudete Santa-Catarina</name><affiliation wicri:level="1"><nlm:aff id="I3">Laboratório de Biologia Celular e Tecidual, CBB-UENF, Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil</nlm:aff><country xml:lang="fr">Brésil</country><wicri:regionArea>Laboratório de Biologia Celular e Tecidual, CBB-UENF, Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602</wicri:regionArea><wicri:noRegion>RJ 28013-602</wicri:noRegion></affiliation></author><author><name sortKey="Silveira, Vanildo" sort="Silveira, Vanildo" uniqKey="Silveira V" first="Vanildo" last="Silveira">Vanildo Silveira</name><affiliation wicri:level="1"><nlm:aff id="I1">Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil</nlm:aff><country xml:lang="fr">Brésil</country><wicri:regionArea>Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602</wicri:regionArea><wicri:noRegion>RJ 28013-602</wicri:noRegion></affiliation></author></analytic><series><title level="j">Proteome Science</title><idno type="eISSN">1477-5956</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><sec><title>Background</title><p>Somatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and understanding of different biological responses. In addition, the identification of molecular markers could lead to the optimization of protocols allowing the use of biotechnology for papaya propagation and reproduction. This work aimed to investigate the effects of polyethylene glycol (PEG) on somatic embryo development and the protein expression profile during somatic embryo maturation in papaya (<italic>Carica papaya</italic> L.).</p></sec><sec><title>Results</title><p>The maturation treatment supplemented with 6% PEG (PEG6) resulted in the greatest number of somatic embryos and induced differential protein expression compared with cultures grown under the control treatment. Among 135 spots selected for MS/MS analysis, 76 spots were successfully identified, 38 of which were common to both treatments, while 14 spots were unique to the control treatment, and 24 spots were unique to the PEG6 treatment. The identified proteins were assigned to seven categories or were unclassified. The most representative class of proteins observed in the control treatment was associated with the stress response (25.8%), while those under PEG6 treatment were carbohydrate and energy metabolism (18.4%) and the stress response (18.4%).</p></sec><sec><title>Conclusions</title><p>The differential expression of three proteins (enolase, esterase and ADH3) induced by PEG6 treatment could play an important role in maturation, and these proteins could be characterized as candidate biomarkers of somatic embryogenesis in papaya.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Aryal, R" uniqKey="Aryal R">R Aryal</name></author><author><name sortKey="Ming, R" uniqKey="Ming R">R Ming</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ming, R" uniqKey="Ming R">R Ming</name></author><author><name sortKey="Yu, Q" uniqKey="Yu Q">Q Yu</name></author><author><name sortKey="Blas, A" 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Valente</name></author><author><name sortKey="Domont, Gb" uniqKey="Domont G">GB Domont</name></author><author><name sortKey="Perales, J" uniqKey="Perales J">J Perales</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gandra, Pg" uniqKey="Gandra P">PG Gandra</name></author><author><name sortKey="Valente, Rh" uniqKey="Valente R">RH Valente</name></author><author><name sortKey="Perales, J" uniqKey="Perales J">J Perales</name></author><author><name sortKey="Pacheco, Ag" uniqKey="Pacheco A">AG Pacheco</name></author><author><name sortKey="Macedo, Dv" uniqKey="Macedo D">DV Macedo</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Brésil</li></country><region><li>État de Rio de Janeiro</li></region></list><tree><country name="Brésil"><noRegion><name sortKey="Vale, Ellen De Moura" sort="Vale, Ellen De Moura" uniqKey="Vale E" first="Ellen De Moura" last="Vale">Ellen De Moura Vale</name></noRegion><name sortKey="Barroso, Tatiana" sort="Barroso, Tatiana" uniqKey="Barroso T" first="Tatiana" last="Barroso">Tatiana Barroso</name><name sortKey="Da Costa, Monique Nunes" sort="Da Costa, Monique Nunes" uniqKey="Da Costa M" first="Monique Nunes" last="Da Costa">Monique Nunes Da Costa</name><name sortKey="Ferreira, Andre Teixeira Da Silva" sort="Ferreira, Andre Teixeira Da Silva" uniqKey="Ferreira A" first="André Teixeira Da Silva" last="Ferreira">André Teixeira Da Silva Ferreira</name><name sortKey="Heringer, Angelo Schuabb" sort="Heringer, Angelo Schuabb" uniqKey="Heringer A" first="Angelo Schuabb" last="Heringer">Angelo Schuabb Heringer</name><name sortKey="Perales, Jonas Enrique Aguilar" sort="Perales, Jonas Enrique Aguilar" uniqKey="Perales J" first="Jonas Enrique Aguilar" last="Perales">Jonas Enrique Aguilar Perales</name><name sortKey="Santa Catarina, Claudete" sort="Santa Catarina, Claudete" uniqKey="Santa Catarina C" first="Claudete" last="Santa-Catarina">Claudete Santa-Catarina</name><name sortKey="Silveira, Vanildo" sort="Silveira, Vanildo" uniqKey="Silveira V" first="Vanildo" last="Silveira">Vanildo Silveira</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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