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The role of proteomics in progressing insights into plant secondary metabolism

Identifieur interne : 000408 ( Main/Exploration ); précédent : 000407; suivant : 000409

The role of proteomics in progressing insights into plant secondary metabolism

Auteurs : María J. Martínez-Esteso [Espagne] ; Ascensi N Martínez-Márquez [Espagne] ; Susana Sellés-Marchart [Espagne, Équateur] ; Jaime A. Morante-Carriel [Espagne] ; Roque Bru-Martínez [Espagne]

Source :

RBID : PMC:4493368

Abstract

The development of omics has enabled the genome-wide exploration of all kinds of biological processes at the molecular level. Almost every field of plant biology has been analyzed at the genomic, transcriptomic and proteomic level. Here we focus on the particular contribution that proteomic technologies have made in progressing knowledge and characterising plant secondary metabolism (SM) pathways since early expectations were created 15 years ago. We analyzed how three major issues in the proteomic analysis of plant SM have been implemented in various research studies. These issues are: (i) the selection of a suitable plant material rich in secondary metabolites of interest, such as specialized tissues and organs, and in vitro cell cultures; (ii) the proteomic strategy to access target proteins, either a comprehensive or a differential analysis; (iii) the proteomic approach, represented by the hypothesis-free discovery proteomics and the hypothesis-driven targeted proteomics. We also examine to what extent the most-advanced technologies have been incorporated into proteomic research in plant SM and highlight some cutting edge techniques that would strongly benefit the progress made in this field.


Url:
DOI: 10.3389/fpls.2015.00504
PubMed: 26217358
PubMed Central: 4493368


Affiliations:


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<name sortKey="Kuzyk, M A" uniqKey="Kuzyk M">M. A. Kuzyk</name>
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<name sortKey="Domanski, D" uniqKey="Domanski D">D. Domanski</name>
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<name sortKey="Chou, T" uniqKey="Chou T">T. Chou</name>
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<name sortKey="Borchers, C H" uniqKey="Borchers C">C. H. Borchers</name>
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<name sortKey="Martinez Esteso, Maria J" sort="Martinez Esteso, Maria J" uniqKey="Martinez Esteso M" first="María J." last="Martínez-Esteso">María J. Martínez-Esteso</name>
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<name sortKey="Bru Martinez, Roque" sort="Bru Martinez, Roque" uniqKey="Bru Martinez R" first="Roque" last="Bru-Martínez">Roque Bru-Martínez</name>
<name sortKey="Martinez Marquez, Ascensi N" sort="Martinez Marquez, Ascensi N" uniqKey="Martinez Marquez A" first="Ascensi N" last="Martínez-Márquez">Ascensi N Martínez-Márquez</name>
<name sortKey="Morante Carriel, Jaime A" sort="Morante Carriel, Jaime A" uniqKey="Morante Carriel J" first="Jaime A." last="Morante-Carriel">Jaime A. Morante-Carriel</name>
<name sortKey="Selles Marchart, Susana" sort="Selles Marchart, Susana" uniqKey="Selles Marchart S" first="Susana" last="Sellés-Marchart">Susana Sellés-Marchart</name>
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<name sortKey="Selles Marchart, Susana" sort="Selles Marchart, Susana" uniqKey="Selles Marchart S" first="Susana" last="Sellés-Marchart">Susana Sellés-Marchart</name>
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