Sample Preparation for Mass Spectrometry Imaging of Plant Tissues: A Review
Identifieur interne : 000058 ( Main/Exploration ); précédent : 000057; suivant : 000059Sample Preparation for Mass Spectrometry Imaging of Plant Tissues: A Review
Auteurs : Yonghui Dong [Italie, Israël] ; Bin Li [États-Unis] ; Sergey Malitsky [Israël] ; Ilana Rogachev [Israël] ; Asaph Aharoni [Israël] ; Filip Kaftan [Allemagne] ; Aleš Svatoš [Allemagne] ; Pietro Franceschi [Italie]Source :
- Frontiers in Plant Science [ 1664-462X ] ; 2016.
Abstract
Mass spectrometry imaging (MSI) is a mass spectrometry based molecular ion imaging technique. It provides the means for ascertaining the spatial distribution of a large variety of analytes directly on tissue sample surfaces without any labeling or staining agents. These advantages make it an attractive molecular histology tool in medical, pharmaceutical, and biological research. Likewise, MSI has started gaining popularity in plant sciences; yet, information regarding sample preparation methods for plant tissues is still limited. Sample preparation is a crucial step that is directly associated with the quality and authenticity of the imaging results, it therefore demands in-depth studies based on the characteristics of plant samples. In this review, a sample preparation pipeline is discussed in detail and illustrated through selected practical examples. In particular, special concerns regarding sample preparation for plant imaging are critically evaluated. Finally, the applications of MSI techniques in plants are reviewed according to different classes of plant metabolites.
Url:
DOI: 10.3389/fpls.2016.00060
PubMed: 26904042
PubMed Central: 4748743
Affiliations:
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Michele all'Adige, Italy</country></nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea></wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="aff2"><institution>Department of Plant and Environmental Sciences, Weizmann Institute of Science</institution><country>Rehovot, Israel</country></nlm:aff><country xml:lang="fr">Israël</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Li, Bin" sort="Li, Bin" uniqKey="Li B" first="Bin" last="Li">Bin Li</name><affiliation wicri:level="1"><nlm:aff id="aff3"><institution>Department of Chemistry and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign</institution><country>Urbana, IL, USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Malitsky, Sergey" sort="Malitsky, Sergey" uniqKey="Malitsky S" first="Sergey" last="Malitsky">Sergey Malitsky</name><affiliation wicri:level="1"><nlm:aff id="aff2"><institution>Department of Plant and Environmental Sciences, Weizmann Institute of Science</institution><country>Rehovot, Israel</country></nlm:aff><country xml:lang="fr">Israël</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Rogachev, Ilana" sort="Rogachev, Ilana" uniqKey="Rogachev I" first="Ilana" last="Rogachev">Ilana Rogachev</name><affiliation wicri:level="1"><nlm:aff id="aff2"><institution>Department of Plant and Environmental Sciences, Weizmann Institute of Science</institution><country>Rehovot, Israel</country></nlm:aff><country xml:lang="fr">Israël</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Aharoni, Asaph" sort="Aharoni, Asaph" uniqKey="Aharoni A" first="Asaph" last="Aharoni">Asaph Aharoni</name><affiliation wicri:level="1"><nlm:aff id="aff2"><institution>Department of Plant and Environmental Sciences, Weizmann Institute of Science</institution><country>Rehovot, Israel</country></nlm:aff><country xml:lang="fr">Israël</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Kaftan, Filip" sort="Kaftan, Filip" uniqKey="Kaftan F" first="Filip" last="Kaftan">Filip Kaftan</name><affiliation wicri:level="1"><nlm:aff id="aff4"><institution>Research Group Mass Spectrometry/Proteomics, Max Planck Institute for Chemical Ecology</institution><country>Jena, Germany</country></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Svatos, Ales" sort="Svatos, Ales" uniqKey="Svatos A" first="Aleš" last="Svatoš">Aleš Svatoš</name><affiliation wicri:level="1"><nlm:aff id="aff4"><institution>Research Group Mass Spectrometry/Proteomics, Max Planck Institute for Chemical Ecology</institution><country>Jena, Germany</country></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="Franceschi, Pietro" sort="Franceschi, Pietro" uniqKey="Franceschi P" first="Pietro" last="Franceschi">Pietro Franceschi</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>Biostatistics and Data Management, Research and Innovation Centre - Fondazione Edmund Mach</institution><country>S. Michele all'Adige, Italy</country></nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea></wicri:regionArea></affiliation></author></analytic><series><title level="j">Frontiers in Plant Science</title><idno type="eISSN">1664-462X</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Mass spectrometry imaging (MSI) is a mass spectrometry based molecular ion imaging technique. It provides the means for ascertaining the spatial distribution of a large variety of analytes directly on tissue sample surfaces without any labeling or staining agents. These advantages make it an attractive molecular histology tool in medical, pharmaceutical, and biological research. Likewise, MSI has started gaining popularity in plant sciences; yet, information regarding sample preparation methods for plant tissues is still limited. Sample preparation is a crucial step that is directly associated with the quality and authenticity of the imaging results, it therefore demands in-depth studies based on the characteristics of plant samples. In this review, a sample preparation pipeline is discussed in detail and illustrated through selected practical examples. In particular, special concerns regarding sample preparation for plant imaging are critically evaluated. Finally, the applications of MSI techniques in plants are reviewed according to different classes of plant metabolites.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Altelaar, A M" uniqKey="Altelaar A">A. M. Altelaar</name></author><author><name sortKey="Klinkert, I" uniqKey="Klinkert I">I. Klinkert</name></author><author><name sortKey="Jalink, K" uniqKey="Jalink K">K. Jalink</name></author><author><name sortKey="De Lange, R P" uniqKey="De Lange R">R. 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Chiba</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Allemagne</li><li>Israël</li><li>Italie</li><li>États-Unis</li></country></list><tree><country name="Italie"><noRegion><name sortKey="Dong, Yonghui" sort="Dong, Yonghui" uniqKey="Dong Y" first="Yonghui" last="Dong">Yonghui Dong</name></noRegion><name sortKey="Franceschi, Pietro" sort="Franceschi, Pietro" uniqKey="Franceschi P" first="Pietro" last="Franceschi">Pietro Franceschi</name></country><country name="Israël"><noRegion><name sortKey="Dong, Yonghui" sort="Dong, Yonghui" uniqKey="Dong Y" first="Yonghui" last="Dong">Yonghui Dong</name></noRegion><name sortKey="Aharoni, Asaph" sort="Aharoni, Asaph" uniqKey="Aharoni A" first="Asaph" last="Aharoni">Asaph Aharoni</name><name sortKey="Malitsky, Sergey" sort="Malitsky, Sergey" uniqKey="Malitsky S" first="Sergey" last="Malitsky">Sergey Malitsky</name><name sortKey="Rogachev, Ilana" sort="Rogachev, Ilana" uniqKey="Rogachev I" first="Ilana" last="Rogachev">Ilana Rogachev</name></country><country name="États-Unis"><noRegion><name sortKey="Li, Bin" sort="Li, Bin" uniqKey="Li B" first="Bin" last="Li">Bin Li</name></noRegion></country><country name="Allemagne"><noRegion><name sortKey="Kaftan, Filip" sort="Kaftan, Filip" uniqKey="Kaftan F" first="Filip" last="Kaftan">Filip Kaftan</name></noRegion><name sortKey="Svatos, Ales" sort="Svatos, Ales" uniqKey="Svatos A" first="Aleš" last="Svatoš">Aleš Svatoš</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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