Genetic diversity of citrus bacterial canker pathogens preserved in herbarium specimens
Identifieur interne : 002303 ( Main/Curation ); précédent : 002302; suivant : 002304Genetic diversity of citrus bacterial canker pathogens preserved in herbarium specimens
Auteurs : Wenbin Li [États-Unis] ; Qijian Song [États-Unis] ; Ronald H. Brlansky [États-Unis] ; John S. Hartung [États-Unis]Source :
- Proceedings of the National Academy of Sciences of the United States of America [ 0027-8424 ] ; 2007.
Abstract
Citrus bacterial canker (CBC) caused by
Url:
DOI: 10.1073/pnas.0705590104
PubMed: 17998540
PubMed Central: 2141793
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: Pour aller vers cette notice dans l'étape Curation :000D36
- to stream Pmc, to step Curation: Pour aller vers cette notice dans l'étape Curation :000D35
- to stream Pmc, to step Checkpoint: Pour aller vers cette notice dans l'étape Curation :001117
- to stream Ncbi, to step Merge: Pour aller vers cette notice dans l'étape Curation :000758
- to stream Ncbi, to step Curation: Pour aller vers cette notice dans l'étape Curation :000758
- to stream Ncbi, to step Checkpoint: Pour aller vers cette notice dans l'étape Curation :000758
- to stream Main, to step Merge: Pour aller vers cette notice dans l'étape Curation :002379
Links to Exploration step
PMC:2141793Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genetic diversity of citrus bacterial canker pathogens preserved in herbarium specimens</title>
<author><name sortKey="Li, Wenbin" sort="Li, Wenbin" uniqKey="Li W" first="Wenbin" last="Li">Wenbin Li</name>
<affiliation wicri:level="2"><nlm:aff id="aff1">University of Florida, Citrus Research and Education Center, Lake Alfred, FL 33850;</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<placeName><region type="state">Floride</region>
</placeName>
<wicri:cityArea>University of Florida, Citrus Research and Education Center, Lake Alfred</wicri:cityArea>
</affiliation>
<affiliation wicri:level="2"><nlm:aff wicri:cut="; and" id="aff3">Molecular Plant Pathology Laboratory, United States Department of Agriculture Agricultural Research Service, Beltsville, MD 20705</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
<wicri:cityArea>Molecular Plant Pathology Laboratory, United States Department of Agriculture Agricultural Research Service, Beltsville</wicri:cityArea>
</affiliation>
</author>
<author><name sortKey="Song, Qijian" sort="Song, Qijian" uniqKey="Song Q" first="Qijian" last="Song">Qijian Song</name>
<affiliation><nlm:aff wicri:cut=" and" id="aff2">Soybean Genomics and Improvement Laboratory</nlm:aff>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="aff4">Department of Natural Resource Science and Landscape Architecture, University of Maryland, College Park, MD 20742</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
<wicri:cityArea>Department of Natural Resource Science and Landscape Architecture, University of Maryland, College Park</wicri:cityArea>
</affiliation>
</author>
<author><name sortKey="Brlansky, Ronald H" sort="Brlansky, Ronald H" uniqKey="Brlansky R" first="Ronald H." last="Brlansky">Ronald H. Brlansky</name>
<affiliation wicri:level="2"><nlm:aff id="aff1">University of Florida, Citrus Research and Education Center, Lake Alfred, FL 33850;</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<placeName><region type="state">Floride</region>
</placeName>
<wicri:cityArea>University of Florida, Citrus Research and Education Center, Lake Alfred</wicri:cityArea>
</affiliation>
</author>
<author><name sortKey="Hartung, John S" sort="Hartung, John S" uniqKey="Hartung J" first="John S." last="Hartung">John S. Hartung</name>
<affiliation wicri:level="2"><nlm:aff wicri:cut="; and" id="aff3">Molecular Plant Pathology Laboratory, United States Department of Agriculture Agricultural Research Service, Beltsville, MD 20705</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
<wicri:cityArea>Molecular Plant Pathology Laboratory, United States Department of Agriculture Agricultural Research Service, Beltsville</wicri:cityArea>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PMC</idno>
<idno type="pmid">17998540</idno>
<idno type="pmc">2141793</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2141793</idno>
<idno type="RBID">PMC:2141793</idno>
<idno type="doi">10.1073/pnas.0705590104</idno>
<date when="2007">2007</date>
<idno type="wicri:Area/Pmc/Corpus">000D36</idno>
<idno type="wicri:Area/Pmc/Curation">000D35</idno>
<idno type="wicri:Area/Pmc/Checkpoint">001117</idno>
<idno type="wicri:Area/Ncbi/Merge">000758</idno>
<idno type="wicri:Area/Ncbi/Curation">000758</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000758</idno>
<idno type="wicri:doubleKey">0027-8424:2007:Li W:genetic:diversity:of</idno>
<idno type="wicri:Area/Main/Merge">002379</idno>
<idno type="wicri:Area/Main/Curation">002303</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genetic diversity of citrus bacterial canker pathogens preserved in herbarium specimens</title>
<author><name sortKey="Li, Wenbin" sort="Li, Wenbin" uniqKey="Li W" first="Wenbin" last="Li">Wenbin Li</name>
<affiliation wicri:level="2"><nlm:aff id="aff1">University of Florida, Citrus Research and Education Center, Lake Alfred, FL 33850;</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<placeName><region type="state">Floride</region>
</placeName>
<wicri:cityArea>University of Florida, Citrus Research and Education Center, Lake Alfred</wicri:cityArea>
</affiliation>
<affiliation wicri:level="2"><nlm:aff wicri:cut="; and" id="aff3">Molecular Plant Pathology Laboratory, United States Department of Agriculture Agricultural Research Service, Beltsville, MD 20705</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
<wicri:cityArea>Molecular Plant Pathology Laboratory, United States Department of Agriculture Agricultural Research Service, Beltsville</wicri:cityArea>
</affiliation>
</author>
<author><name sortKey="Song, Qijian" sort="Song, Qijian" uniqKey="Song Q" first="Qijian" last="Song">Qijian Song</name>
<affiliation><nlm:aff wicri:cut=" and" id="aff2">Soybean Genomics and Improvement Laboratory</nlm:aff>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="aff4">Department of Natural Resource Science and Landscape Architecture, University of Maryland, College Park, MD 20742</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
<wicri:cityArea>Department of Natural Resource Science and Landscape Architecture, University of Maryland, College Park</wicri:cityArea>
</affiliation>
</author>
<author><name sortKey="Brlansky, Ronald H" sort="Brlansky, Ronald H" uniqKey="Brlansky R" first="Ronald H." last="Brlansky">Ronald H. Brlansky</name>
<affiliation wicri:level="2"><nlm:aff id="aff1">University of Florida, Citrus Research and Education Center, Lake Alfred, FL 33850;</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<placeName><region type="state">Floride</region>
</placeName>
<wicri:cityArea>University of Florida, Citrus Research and Education Center, Lake Alfred</wicri:cityArea>
</affiliation>
</author>
<author><name sortKey="Hartung, John S" sort="Hartung, John S" uniqKey="Hartung J" first="John S." last="Hartung">John S. Hartung</name>
<affiliation wicri:level="2"><nlm:aff wicri:cut="; and" id="aff3">Molecular Plant Pathology Laboratory, United States Department of Agriculture Agricultural Research Service, Beltsville, MD 20705</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
<wicri:cityArea>Molecular Plant Pathology Laboratory, United States Department of Agriculture Agricultural Research Service, Beltsville</wicri:cityArea>
</affiliation>
</author>
</analytic>
<series><title level="j">Proceedings of the National Academy of Sciences of the United States of America</title>
<idno type="ISSN">0027-8424</idno>
<idno type="eISSN">1091-6490</idno>
<imprint><date when="2007">2007</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en"><p>Citrus bacterial canker (CBC) caused by <italic>Xanthomonas axonopodis</italic>
pv. <italic>citri</italic>
(Xac) was first documented in India and Java in the mid 19th century. Since that time, the known distribution of the disease has steadily increased. Concurrent with the dispersion of the pathogen, the diversity of described strains continues to increase, with novel strains appearing in Saudi Arabia, Iran, and Florida in the last decade. Herbarium specimens of infected plants provide an historical record documenting both the geographic distribution and genetic diversity of the pathogen in the past. However, no method was available to assess the genetic diversity within these herbarium samples. We have developed a method, insertion event scanning (IES), and applied the method to characterize the diversity present within CBC populations documented as herbarium specimens over the past century. IES is based on the specific amplification of junction fragments that define insertion events. The potential for IES in current forensic applications is demonstrated by finding an exact match of pathogen genotypes preserved in herbarium specimens from Japan and Florida, demonstrating the source of the original outbreak of citrus canker in Florida in 1911. IES is a very sensitive technique for differentiating bacterial strains and can be applied to any of the several hundred bacteria for which full genomic sequence data are available.</p>
</div>
</front>
</TEI>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/Main/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 002303 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Curation/biblio.hfd -nk 002303 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Wicri/Bois |area= OrangerV1 |flux= Main |étape= Curation |type= RBID |clé= PMC:2141793 |texte= Genetic diversity of citrus bacterial canker pathogens preserved in herbarium specimens }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Curation/RBID.i -Sk "pubmed:17998540" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Curation/biblio.hfd \ | NlmPubMed2Wicri -a OrangerV1
This area was generated with Dilib version V0.6.25. |