Arbuscular mycorrhizal fungi inoculation mediated changes in rhizosphere bacterial community structure while promoting revegetation in a semiarid ecosystem.
Identifieur interne : 000E60 ( Main/Exploration ); précédent : 000E59; suivant : 000E61Arbuscular mycorrhizal fungi inoculation mediated changes in rhizosphere bacterial community structure while promoting revegetation in a semiarid ecosystem.
Auteurs : G. Rodríguez-Caballero [Espagne] ; F. Caravaca [Espagne] ; A J Fernández-González [Espagne] ; M M Alguacil [Espagne] ; M. Fernández-L Pez [Espagne] ; A. Roldán [Espagne]Source :
- The Science of the total environment [ 1879-1026 ] ; 2017.
Descripteurs français
- KwdFr :
- Asteraceae (MeSH), Bactéries (classification), Espagne (MeSH), Inoculants agricoles (MeSH), Lavandula (MeSH), Microbiologie du sol (MeSH), Mycorhizes (physiologie), Racines de plante (microbiologie), Rhizosphère (MeSH), Salvia (MeSH), Sol (composition chimique), Thymus (plante) (MeSH), Écosystème (MeSH).
- MESH :
- composition chimique : Bactéries, Sol.
- microbiologie : Racines de plante.
- physiologie : Mycorhizes.
- Asteraceae, Espagne, Inoculants agricoles, Lavandula, Microbiologie du sol, Rhizosphère, Salvia, Thymus (plante), Écosystème.
English descriptors
- KwdEn :
- MESH :
- chemical , chemistry : Soil.
- classification : Bacteria.
- microbiology : Plant Roots.
- physiology : Mycorrhizae.
- Agricultural Inoculants, Asteraceae, Ecosystem, Lavandula, Rhizosphere, Salvia, Soil Microbiology, Spain, Thymus Plant.
Abstract
The main goal of this study was to assess the effect of the inoculation of four autochthonous shrub species with the arbuscular mycorrhizal (AM) fungus Rhizophagus intraradices on the rhizosphere bacterial community and to ascertain whether such an effect is dependent on the host plant species. Additionally, analysis of rhizosphere soil chemical and biochemical properties was performed to find relationships between them and the rhizosphere bacterial communities. Non-metric multidimensional scaling analysis and subsequent permutational multivariate analysis of variance revealed differences in bacterial community composition and structure between non-inoculated and inoculated rhizospheres. Moreover, an influence of the plant species was observed. Different bacterial groups were found to be indicator taxonomic groups of non-inoculated and inoculated rhizospheres, Gemmatimonadetes and Anaerolineaceae, respectively, being the most notable indicators. As shown by distance based redundancy analysis, the shifts in bacterial community composition and structure mediated by the inoculation with the AM fungus were mainly related to changes in plant nutrients and growth parameters, such as the shoot phosphorus content. Our findings suggest that the AM fungal inoculum was able to modify the rhizosphere bacterial community assemblage while improving the host plant performance.
DOI: 10.1016/j.scitotenv.2017.01.128
PubMed: 28131451
Affiliations:
Links toward previous steps (curation, corpus...)
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Rodríguez-Caballero</name><affiliation wicri:level="2"><nlm:affiliation>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. Box 164, Campus de Espinardo, 30100 Murcia, Spain. Electronic address: grcaballero@cebas.csic.es.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. Box 164, Campus de Espinardo, 30100 Murcia</wicri:regionArea><placeName><region nuts="2" type="communauté">Région de Murcie</region></placeName></affiliation></author><author><name sortKey="Caravaca, F" sort="Caravaca, F" uniqKey="Caravaca F" first="F" last="Caravaca">F. Caravaca</name><affiliation wicri:level="2"><nlm:affiliation>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. Box 164, Campus de Espinardo, 30100 Murcia, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. 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Box 164, Campus de Espinardo, 30100 Murcia, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. Box 164, Campus de Espinardo, 30100 Murcia</wicri:regionArea><placeName><region nuts="2" type="communauté">Région de Murcie</region></placeName></affiliation></author><author><name sortKey="Fernandez L Pez, M" sort="Fernandez L Pez, M" uniqKey="Fernandez L Pez M" first="M" last="Fernández-L Pez">M. Fernández-L Pez</name><affiliation wicri:level="2"><nlm:affiliation>CSIC - Estación Experimental del Zaidín, Soil Microbiology and Symbiotic Systems Department, Profesor Albareda, 1, 18008 Granada, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>CSIC - Estación Experimental del Zaidín, Soil Microbiology and Symbiotic Systems Department, Profesor Albareda, 1, 18008 Granada</wicri:regionArea><placeName><region nuts="2" type="communauté">Andalousie</region></placeName></affiliation></author><author><name sortKey="Roldan, A" sort="Roldan, A" uniqKey="Roldan A" first="A" last="Roldán">A. Roldán</name><affiliation wicri:level="2"><nlm:affiliation>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. Box 164, Campus de Espinardo, 30100 Murcia, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. Box 164, Campus de Espinardo, 30100 Murcia</wicri:regionArea><placeName><region nuts="2" type="communauté">Région de Murcie</region></placeName></affiliation></author></analytic><series><title level="j">The Science of the total environment</title><idno type="eISSN">1879-1026</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Agricultural Inoculants (MeSH)</term><term>Asteraceae (MeSH)</term><term>Bacteria (classification)</term><term>Ecosystem (MeSH)</term><term>Lavandula (MeSH)</term><term>Mycorrhizae (physiology)</term><term>Plant Roots (microbiology)</term><term>Rhizosphere (MeSH)</term><term>Salvia (MeSH)</term><term>Soil (chemistry)</term><term>Soil Microbiology (MeSH)</term><term>Spain (MeSH)</term><term>Thymus Plant (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Asteraceae (MeSH)</term><term>Bactéries (classification)</term><term>Espagne (MeSH)</term><term>Inoculants agricoles (MeSH)</term><term>Lavandula (MeSH)</term><term>Microbiologie du sol (MeSH)</term><term>Mycorhizes (physiologie)</term><term>Racines de plante (microbiologie)</term><term>Rhizosphère (MeSH)</term><term>Salvia (MeSH)</term><term>Sol (composition chimique)</term><term>Thymus (plante) (MeSH)</term><term>Écosystème (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Soil</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Bacteria</term></keywords><keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Bactéries</term><term>Sol</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Racines de plante</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Roots</term></keywords><keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Mycorhizes</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Agricultural Inoculants</term><term>Asteraceae</term><term>Ecosystem</term><term>Lavandula</term><term>Rhizosphere</term><term>Salvia</term><term>Soil Microbiology</term><term>Spain</term><term>Thymus Plant</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Asteraceae</term><term>Espagne</term><term>Inoculants agricoles</term><term>Lavandula</term><term>Microbiologie du sol</term><term>Rhizosphère</term><term>Salvia</term><term>Thymus (plante)</term><term>Écosystème</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The main goal of this study was to assess the effect of the inoculation of four autochthonous shrub species with the arbuscular mycorrhizal (AM) fungus Rhizophagus intraradices on the rhizosphere bacterial community and to ascertain whether such an effect is dependent on the host plant species. Additionally, analysis of rhizosphere soil chemical and biochemical properties was performed to find relationships between them and the rhizosphere bacterial communities. Non-metric multidimensional scaling analysis and subsequent permutational multivariate analysis of variance revealed differences in bacterial community composition and structure between non-inoculated and inoculated rhizospheres. Moreover, an influence of the plant species was observed. Different bacterial groups were found to be indicator taxonomic groups of non-inoculated and inoculated rhizospheres, Gemmatimonadetes and Anaerolineaceae, respectively, being the most notable indicators. As shown by distance based redundancy analysis, the shifts in bacterial community composition and structure mediated by the inoculation with the AM fungus were mainly related to changes in plant nutrients and growth parameters, such as the shoot phosphorus content. Our findings suggest that the AM fungal inoculum was able to modify the rhizosphere bacterial community assemblage while improving the host plant performance.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">28131451</PMID><DateCompleted><Year>2018</Year><Month>06</Month><Day>27</Day></DateCompleted><DateRevised><Year>2018</Year><Month>12</Month><Day>02</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1879-1026</ISSN><JournalIssue CitedMedium="Internet"><Volume>584-585</Volume><PubDate><Year>2017</Year><Month>Apr</Month><Day>15</Day></PubDate></JournalIssue><Title>The Science of the total environment</Title><ISOAbbreviation>Sci Total Environ</ISOAbbreviation></Journal><ArticleTitle>Arbuscular mycorrhizal fungi inoculation mediated changes in rhizosphere bacterial community structure while promoting revegetation in a semiarid ecosystem.</ArticleTitle><Pagination><MedlinePgn>838-848</MedlinePgn></Pagination><ELocationID EIdType="pii" ValidYN="Y">S0048-9697(17)30138-9</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.scitotenv.2017.01.128</ELocationID><Abstract><AbstractText>The main goal of this study was to assess the effect of the inoculation of four autochthonous shrub species with the arbuscular mycorrhizal (AM) fungus Rhizophagus intraradices on the rhizosphere bacterial community and to ascertain whether such an effect is dependent on the host plant species. Additionally, analysis of rhizosphere soil chemical and biochemical properties was performed to find relationships between them and the rhizosphere bacterial communities. Non-metric multidimensional scaling analysis and subsequent permutational multivariate analysis of variance revealed differences in bacterial community composition and structure between non-inoculated and inoculated rhizospheres. Moreover, an influence of the plant species was observed. Different bacterial groups were found to be indicator taxonomic groups of non-inoculated and inoculated rhizospheres, Gemmatimonadetes and Anaerolineaceae, respectively, being the most notable indicators. As shown by distance based redundancy analysis, the shifts in bacterial community composition and structure mediated by the inoculation with the AM fungus were mainly related to changes in plant nutrients and growth parameters, such as the shoot phosphorus content. Our findings suggest that the AM fungal inoculum was able to modify the rhizosphere bacterial community assemblage while improving the host plant performance.</AbstractText><CopyrightInformation>Copyright © 2017 Elsevier B.V. All rights reserved.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Rodríguez-Caballero</LastName><ForeName>G</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. Box 164, Campus de Espinardo, 30100 Murcia, Spain. Electronic address: grcaballero@cebas.csic.es.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Caravaca</LastName><ForeName>F</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. Box 164, Campus de Espinardo, 30100 Murcia, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fernández-González</LastName><ForeName>A J</ForeName><Initials>AJ</Initials><AffiliationInfo><Affiliation>CSIC - Estación Experimental del Zaidín, Soil Microbiology and Symbiotic Systems Department, Profesor Albareda, 1, 18008 Granada, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Alguacil</LastName><ForeName>M M</ForeName><Initials>MM</Initials><AffiliationInfo><Affiliation>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. Box 164, Campus de Espinardo, 30100 Murcia, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fernández-López</LastName><ForeName>M</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>CSIC - Estación Experimental del Zaidín, Soil Microbiology and Symbiotic Systems Department, Profesor Albareda, 1, 18008 Granada, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Roldán</LastName><ForeName>A</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, P.O. Box 164, Campus de Espinardo, 30100 Murcia, Spain.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>01</Month><Day>26</Day></ArticleDate></Article><MedlineJournalInfo><Country>Netherlands</Country><MedlineTA>Sci Total Environ</MedlineTA><NlmUniqueID>0330500</NlmUniqueID><ISSNLinking>0048-9697</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012987">Soil</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D059827" MajorTopicYN="Y">Agricultural Inoculants</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D019659" MajorTopicYN="N">Asteraceae</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001419" MajorTopicYN="N">Bacteria</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017753" MajorTopicYN="N">Ecosystem</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D027523" MajorTopicYN="N">Lavandula</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D058441" MajorTopicYN="Y">Rhizosphere</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D027544" MajorTopicYN="N">Salvia</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012987" MajorTopicYN="N">Soil</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012988" MajorTopicYN="Y">Soil Microbiology</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013030" MajorTopicYN="N">Spain</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D046930" MajorTopicYN="N">Thymus Plant</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Autochthonous shrub species</Keyword><Keyword MajorTopicYN="N">Microbial activity</Keyword><Keyword MajorTopicYN="N">Pyrosequencing</Keyword><Keyword MajorTopicYN="N">Rhizosphere bacterial community</Keyword><Keyword MajorTopicYN="N">Semiarid environment</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>10</Month><Day>20</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2017</Year><Month>01</Month><Day>18</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>01</Month><Day>19</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>1</Month><Day>31</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2018</Year><Month>6</Month><Day>28</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>1</Month><Day>30</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28131451</ArticleId><ArticleId IdType="pii">S0048-9697(17)30138-9</ArticleId><ArticleId IdType="doi">10.1016/j.scitotenv.2017.01.128</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Espagne</li></country><region><li>Andalousie</li><li>Région de Murcie</li></region></list><tree><country name="Espagne"><region name="Région de Murcie"><name sortKey="Rodriguez Caballero, G" sort="Rodriguez Caballero, G" uniqKey="Rodriguez Caballero G" first="G" last="Rodríguez-Caballero">G. Rodríguez-Caballero</name></region><name sortKey="Alguacil, M M" sort="Alguacil, M M" uniqKey="Alguacil M" first="M M" last="Alguacil">M M Alguacil</name><name sortKey="Caravaca, F" sort="Caravaca, F" uniqKey="Caravaca F" first="F" last="Caravaca">F. Caravaca</name><name sortKey="Fernandez Gonzalez, A J" sort="Fernandez Gonzalez, A J" uniqKey="Fernandez Gonzalez A" first="A J" last="Fernández-González">A J Fernández-González</name><name sortKey="Fernandez L Pez, M" sort="Fernandez L Pez, M" uniqKey="Fernandez L Pez M" first="M" last="Fernández-L Pez">M. Fernández-L Pez</name><name sortKey="Roldan, A" sort="Roldan, A" uniqKey="Roldan A" first="A" last="Roldán">A. Roldán</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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