In situ stable isotope probing of phosphate-solubilizing bacteria in the hyphosphere.
Identifieur interne : 001119 ( Main/Exploration ); précédent : 001118; suivant : 001120In situ stable isotope probing of phosphate-solubilizing bacteria in the hyphosphere.
Auteurs : Fei Wang [République populaire de Chine] ; Ning Shi [République populaire de Chine] ; Rongfeng Jiang [République populaire de Chine] ; Fusuo Zhang [République populaire de Chine] ; Gu Feng [République populaire de Chine]Source :
- Journal of experimental botany [ 1460-2431 ] ; 2016.
Descripteurs français
- KwdFr :
- ARN ribosomique (génétique), Bactéries (effets des médicaments et des substances chimiques), Bactéries (métabolisme), Biomasse (MeSH), Concentration en ions d'hydrogène (MeSH), Dioxyde de carbone (métabolisme), Hydrogénocarbonate de sodium (pharmacologie), Hyphae (croissance et développement), Hyphae (effets des médicaments et des substances chimiques), Isotopes du carbone (MeSH), Marquage isotopique (méthodes), Mycorhizes (physiologie), Métabolisme glucidique (effets des médicaments et des substances chimiques), Phosphates (métabolisme), Phosphore (métabolisme), Phylogenèse (MeSH), Polymorphisme de restriction (MeSH), Pousses de plante (effets des médicaments et des substances chimiques), Pousses de plante (métabolisme), Sol (MeSH), Solubilité (MeSH), Zea mays (effets des médicaments et des substances chimiques), Zea mays (microbiologie), Zea mays (métabolisme).
- MESH :
- croissance et développement : Hyphae.
- effets des médicaments et des substances chimiques : Bactéries, Hyphae, Métabolisme glucidique, Pousses de plante, Zea mays.
- génétique : ARN ribosomique.
- microbiologie : Zea mays.
- métabolisme : Bactéries, Dioxyde de carbone, Phosphates, Phosphore, Pousses de plante, Zea mays.
- méthodes : Marquage isotopique.
- pharmacologie : Hydrogénocarbonate de sodium.
- physiologie : Mycorhizes.
- Biomasse, Concentration en ions d'hydrogène, Isotopes du carbone, Phylogenèse, Polymorphisme de restriction, Sol, Solubilité.
English descriptors
- KwdEn :
- Bacteria (drug effects), Bacteria (metabolism), Biomass (MeSH), Carbohydrate Metabolism (drug effects), Carbon Dioxide (metabolism), Carbon Isotopes (MeSH), Hydrogen-Ion Concentration (MeSH), Hyphae (drug effects), Hyphae (growth & development), Isotope Labeling (methods), Mycorrhizae (physiology), Phosphates (metabolism), Phosphorus (metabolism), Phylogeny (MeSH), Plant Shoots (drug effects), Plant Shoots (metabolism), Polymorphism, Restriction Fragment Length (MeSH), RNA, Ribosomal (genetics), Sodium Bicarbonate (pharmacology), Soil (MeSH), Solubility (MeSH), Zea mays (drug effects), Zea mays (metabolism), Zea mays (microbiology).
- MESH :
- chemical , genetics : RNA, Ribosomal.
- chemical , metabolism : Carbon Dioxide, Phosphates, Phosphorus.
- drug effects : Bacteria, Carbohydrate Metabolism, Hyphae, Plant Shoots, Zea mays.
- growth & development : Hyphae.
- metabolism : Bacteria, Plant Shoots, Zea mays.
- methods : Isotope Labeling.
- microbiology : Zea mays.
- chemical , pharmacology : Sodium Bicarbonate.
- physiology : Mycorrhizae.
- Biomass, Carbon Isotopes, Hydrogen-Ion Concentration, Phylogeny, Polymorphism, Restriction Fragment Length, Soil, Solubility.
Abstract
This study used a [(13)C]DNA stable isotope probing (SIP) technique to elucidate a direct pathway for the translocation of (13)C-labeled photoassimilate from maize plants to extraradical mycelium-associated phosphate-solubilizing bacteria (PSB) that mediate the mineralization and turnover of soil organic phosphorus (P) in the hyphosphere. Inoculation with PSB alone did not provide any benefit to maize plants but utilized the added phytate-P to their own advantage, while inoculation with Rhizophagus irregularis alone significantly promoted shoot biomass and P content compared with the control. However, compared with both sole inoculation treatments, combined inoculation with PSB and R. irregularis in the hyphosphere enhanced organic P mineralization and increased microbial biomass P in the soil. There was no extra benefit to plant P uptake but the hyphal growth of R. irregularis was reduced, suggesting that PSB benefited from the arbuscular mycorrhizal (AM) fungal mycelium and competed for soil P with the fungus. The combination of T-RFLP (terminal restriction fragment length polymorphism) analysis with a clone library revealed that one of the bacteria that actively assimilated carbon derived from pulse-labeled maize plants was Pseudomonas alcaligenes (Pseudomonadaceae) that was initially inoculated into the hyphosphere soil. These results provide the first in situ demonstration of the pathway underlying the carbon flux from plants to the AM mycelium-associated PSB, and the PSB assimilated the photosynthates exuded by the fungus and promoted mineralization and turnover of organic P in the soil.
DOI: 10.1093/jxb/erv561
PubMed: 26802172
PubMed Central: PMC4783358
Affiliations:
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Environmental Sciences, China Agricultural University, Beijing 100193, PR China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Shi, Ning" sort="Shi, Ning" uniqKey="Shi N" first="Ning" last="Shi">Ning Shi</name><affiliation wicri:level="1"><nlm:affiliation>College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, PR China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Jiang, Rongfeng" sort="Jiang, Rongfeng" 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effects)</term><term>Bacteria (metabolism)</term><term>Biomass (MeSH)</term><term>Carbohydrate Metabolism (drug effects)</term><term>Carbon Dioxide (metabolism)</term><term>Carbon Isotopes (MeSH)</term><term>Hydrogen-Ion Concentration (MeSH)</term><term>Hyphae (drug effects)</term><term>Hyphae (growth & development)</term><term>Isotope Labeling (methods)</term><term>Mycorrhizae (physiology)</term><term>Phosphates (metabolism)</term><term>Phosphorus (metabolism)</term><term>Phylogeny (MeSH)</term><term>Plant Shoots (drug effects)</term><term>Plant Shoots (metabolism)</term><term>Polymorphism, Restriction Fragment Length (MeSH)</term><term>RNA, Ribosomal (genetics)</term><term>Sodium Bicarbonate (pharmacology)</term><term>Soil (MeSH)</term><term>Solubility (MeSH)</term><term>Zea mays (drug effects)</term><term>Zea mays (metabolism)</term><term>Zea mays (microbiology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN ribosomique (génétique)</term><term>Bactéries (effets des médicaments et des substances chimiques)</term><term>Bactéries (métabolisme)</term><term>Biomasse (MeSH)</term><term>Concentration en ions d'hydrogène (MeSH)</term><term>Dioxyde de carbone (métabolisme)</term><term>Hydrogénocarbonate de sodium (pharmacologie)</term><term>Hyphae (croissance et développement)</term><term>Hyphae (effets des médicaments et des substances chimiques)</term><term>Isotopes du carbone (MeSH)</term><term>Marquage isotopique (méthodes)</term><term>Mycorhizes (physiologie)</term><term>Métabolisme glucidique (effets des médicaments et des substances chimiques)</term><term>Phosphates (métabolisme)</term><term>Phosphore (métabolisme)</term><term>Phylogenèse (MeSH)</term><term>Polymorphisme de restriction (MeSH)</term><term>Pousses de plante (effets des médicaments et des substances chimiques)</term><term>Pousses de plante (métabolisme)</term><term>Sol (MeSH)</term><term>Solubilité (MeSH)</term><term>Zea mays (effets des médicaments et des substances chimiques)</term><term>Zea mays (microbiologie)</term><term>Zea mays (métabolisme)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Ribosomal</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Carbon Dioxide</term><term>Phosphates</term><term>Phosphorus</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Hyphae</term></keywords><keywords scheme="MESH" qualifier="drug effects" xml:lang="en"><term>Bacteria</term><term>Carbohydrate Metabolism</term><term>Hyphae</term><term>Plant Shoots</term><term>Zea mays</term></keywords><keywords scheme="MESH" qualifier="effets des médicaments et des substances chimiques" xml:lang="fr"><term>Bactéries</term><term>Hyphae</term><term>Métabolisme glucidique</term><term>Pousses de plante</term><term>Zea mays</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Hyphae</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN ribosomique</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Bacteria</term><term>Plant Shoots</term><term>Zea mays</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Isotope Labeling</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Zea mays</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Zea mays</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Bactéries</term><term>Dioxyde de carbone</term><term>Phosphates</term><term>Phosphore</term><term>Pousses de plante</term><term>Zea mays</term></keywords><keywords scheme="MESH" qualifier="méthodes" xml:lang="fr"><term>Marquage isotopique</term></keywords><keywords scheme="MESH" qualifier="pharmacologie" xml:lang="fr"><term>Hydrogénocarbonate de sodium</term></keywords><keywords scheme="MESH" type="chemical" qualifier="pharmacology" xml:lang="en"><term>Sodium Bicarbonate</term></keywords><keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Mycorhizes</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Biomass</term><term>Carbon Isotopes</term><term>Hydrogen-Ion Concentration</term><term>Phylogeny</term><term>Polymorphism, Restriction Fragment Length</term><term>Soil</term><term>Solubility</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Biomasse</term><term>Concentration en ions d'hydrogène</term><term>Isotopes du carbone</term><term>Phylogenèse</term><term>Polymorphisme de restriction</term><term>Sol</term><term>Solubilité</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">This study used a [(13)C]DNA stable isotope probing (SIP) technique to elucidate a direct pathway for the translocation of (13)C-labeled photoassimilate from maize plants to extraradical mycelium-associated phosphate-solubilizing bacteria (PSB) that mediate the mineralization and turnover of soil organic phosphorus (P) in the hyphosphere. Inoculation with PSB alone did not provide any benefit to maize plants but utilized the added phytate-P to their own advantage, while inoculation with Rhizophagus irregularis alone significantly promoted shoot biomass and P content compared with the control. However, compared with both sole inoculation treatments, combined inoculation with PSB and R. irregularis in the hyphosphere enhanced organic P mineralization and increased microbial biomass P in the soil. There was no extra benefit to plant P uptake but the hyphal growth of R. irregularis was reduced, suggesting that PSB benefited from the arbuscular mycorrhizal (AM) fungal mycelium and competed for soil P with the fungus. The combination of T-RFLP (terminal restriction fragment length polymorphism) analysis with a clone library revealed that one of the bacteria that actively assimilated carbon derived from pulse-labeled maize plants was Pseudomonas alcaligenes (Pseudomonadaceae) that was initially inoculated into the hyphosphere soil. These results provide the first in situ demonstration of the pathway underlying the carbon flux from plants to the AM mycelium-associated PSB, and the PSB assimilated the photosynthates exuded by the fungus and promoted mineralization and turnover of organic P in the soil.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">26802172</PMID><DateCompleted><Year>2016</Year><Month>12</Month><Day>13</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1460-2431</ISSN><JournalIssue CitedMedium="Internet"><Volume>67</Volume><Issue>6</Issue><PubDate><Year>2016</Year><Month>Mar</Month></PubDate></JournalIssue><Title>Journal of experimental botany</Title><ISOAbbreviation>J Exp Bot</ISOAbbreviation></Journal><ArticleTitle>In situ stable isotope probing of phosphate-solubilizing bacteria in the hyphosphere.</ArticleTitle><Pagination><MedlinePgn>1689-701</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1093/jxb/erv561</ELocationID><Abstract><AbstractText>This study used a [(13)C]DNA stable isotope probing (SIP) technique to elucidate a direct pathway for the translocation of (13)C-labeled photoassimilate from maize plants to extraradical mycelium-associated phosphate-solubilizing bacteria (PSB) that mediate the mineralization and turnover of soil organic phosphorus (P) in the hyphosphere. Inoculation with PSB alone did not provide any benefit to maize plants but utilized the added phytate-P to their own advantage, while inoculation with Rhizophagus irregularis alone significantly promoted shoot biomass and P content compared with the control. However, compared with both sole inoculation treatments, combined inoculation with PSB and R. irregularis in the hyphosphere enhanced organic P mineralization and increased microbial biomass P in the soil. There was no extra benefit to plant P uptake but the hyphal growth of R. irregularis was reduced, suggesting that PSB benefited from the arbuscular mycorrhizal (AM) fungal mycelium and competed for soil P with the fungus. The combination of T-RFLP (terminal restriction fragment length polymorphism) analysis with a clone library revealed that one of the bacteria that actively assimilated carbon derived from pulse-labeled maize plants was Pseudomonas alcaligenes (Pseudomonadaceae) that was initially inoculated into the hyphosphere soil. These results provide the first in situ demonstration of the pathway underlying the carbon flux from plants to the AM mycelium-associated PSB, and the PSB assimilated the photosynthates exuded by the fungus and promoted mineralization and turnover of organic P in the soil.</AbstractText><CopyrightInformation>© The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Fei</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Shi</LastName><ForeName>Ning</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jiang</LastName><ForeName>Rongfeng</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Fusuo</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Feng</LastName><ForeName>Gu</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, PR China fenggu@cau.edu.cn.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>01</Month><Day>21</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>J Exp Bot</MedlineTA><NlmUniqueID>9882906</NlmUniqueID><ISSNLinking>0022-0957</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D002247">Carbon Isotopes</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010710">Phosphates</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012335">RNA, Ribosomal</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012987">Soil</NameOfSubstance></Chemical><Chemical><RegistryNumber>142M471B3J</RegistryNumber><NameOfSubstance UI="D002245">Carbon Dioxide</NameOfSubstance></Chemical><Chemical><RegistryNumber>27YLU75U4W</RegistryNumber><NameOfSubstance UI="D010758">Phosphorus</NameOfSubstance></Chemical><Chemical><RegistryNumber>8MDF5V39QO</RegistryNumber><NameOfSubstance UI="D017693">Sodium Bicarbonate</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D001419" MajorTopicYN="N">Bacteria</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018533" MajorTopicYN="N">Biomass</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D050260" MajorTopicYN="N">Carbohydrate Metabolism</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002245" MajorTopicYN="N">Carbon Dioxide</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002247" MajorTopicYN="N">Carbon Isotopes</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006863" MajorTopicYN="N">Hydrogen-Ion Concentration</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D025301" MajorTopicYN="N">Hyphae</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D007553" MajorTopicYN="N">Isotope Labeling</DescriptorName><QualifierName UI="Q000379" MajorTopicYN="Y">methods</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010710" MajorTopicYN="N">Phosphates</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010758" MajorTopicYN="N">Phosphorus</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018520" MajorTopicYN="N">Plant Shoots</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012150" MajorTopicYN="N">Polymorphism, Restriction Fragment Length</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012335" MajorTopicYN="N">RNA, Ribosomal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017693" MajorTopicYN="N">Sodium Bicarbonate</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012987" MajorTopicYN="Y">Soil</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012995" MajorTopicYN="N">Solubility</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D003313" MajorTopicYN="N">Zea mays</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">13CO2 pulse labeling</Keyword><Keyword MajorTopicYN="N">AM fungus</Keyword><Keyword MajorTopicYN="N">hyphosphere</Keyword><Keyword MajorTopicYN="N">maize</Keyword><Keyword MajorTopicYN="N">organic phosphate</Keyword><Keyword MajorTopicYN="N">phosphate-solubilizing bacteria (PSB).</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate 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first="Ning" last="Shi">Ning Shi</name><name sortKey="Zhang, Fusuo" sort="Zhang, Fusuo" uniqKey="Zhang F" first="Fusuo" last="Zhang">Fusuo Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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