The composition of arbuscular mycorrhizal fungal communities differs among the roots, spores and extraradical mycelia associated with five Mediterranean plant species.
Identifieur interne : 001369 ( Main/Exploration ); précédent : 001368; suivant : 001370The composition of arbuscular mycorrhizal fungal communities differs among the roots, spores and extraradical mycelia associated with five Mediterranean plant species.
Auteurs : Sara Varela-Cervero [Espagne] ; Martti Vasar [Estonie] ; John Davison [Estonie] ; José Miguel Barea [Espagne] ; Maarja Öpik [Estonie] ; Concepci N Azc N-Aguilar [Espagne]Source :
- Environmental microbiology [ 1462-2920 ] ; 2015.
Descripteurs français
- KwdFr :
- ARN fongique (génétique), ARN ribosomique (génétique), Analyse de séquence d'ARN (MeSH), Consortiums microbiens (MeSH), Données de séquences moléculaires (MeSH), Espagne (MeSH), Microbiologie du sol (MeSH), Mycelium (génétique), Mycorhizes (MeSH), Plantes (microbiologie), Racines de plante (microbiologie), Région méditerranéenne (MeSH), Sol (MeSH), Spores fongiques (génétique), Séquence nucléotidique (MeSH).
- MESH :
English descriptors
- KwdEn :
- Base Sequence (MeSH), Mediterranean Region (MeSH), Microbial Consortia (MeSH), Molecular Sequence Data (MeSH), Mycelium (genetics), Mycorrhizae (MeSH), Plant Roots (microbiology), Plants (microbiology), RNA, Fungal (genetics), RNA, Ribosomal (genetics), Sequence Analysis, RNA (MeSH), Soil (MeSH), Soil Microbiology (MeSH), Spain (MeSH), Spores, Fungal (genetics).
- MESH :
- chemical , genetics : RNA, Fungal, RNA, Ribosomal.
- genetics : Mycelium, Spores, Fungal.
- microbiology : Plant Roots, Plants.
- Base Sequence, Mediterranean Region, Microbial Consortia, Molecular Sequence Data, Mycorrhizae, Sequence Analysis, RNA, Soil, Soil Microbiology, Spain.
Abstract
Arbuscular mycorrhizal fungi (AMF) are essential constituents of most terrestrial ecosystems. AMF species differ in terms of propagation strategies and the major propagules they form. This study compared the AMF community composition of different propagule fractions - colonized roots, spores and extraradical mycelium (ERM) - associated with five Mediterranean plant species in Sierra de Baza Natural Park (Granada, Spain). AMF were identified using 454 pyrosequencing of the SSU rRNA gene. A total of 96 AMF phylogroups [virtual taxa (VT)] were detected in the study site, including 31 novel VT. After per-sample sequencing depth standardization, 71 VT were recorded from plant roots, and 47 from each of the spore and ERM fractions. AMF communities differed significantly among the propagule fractions, and the root-colonizing fraction differed among host plant species. Indicator VT were detected for the root (13 Glomus VT), spore (Paraglomus VT281, VT336, Pacispora VT284) and ERM (Diversispora VT62) fractions. This study provides detailed evidence from a natural system that AMF taxa are differentially allocated among soil mycelium, soil spores and colonized root propagules. This has important implications for interpreting AMF diversity surveys and designing applications of AMF in vegetation restoration.
DOI: 10.1111/1462-2920.12810
PubMed: 25677957
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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<term>Microbiologie du sol (MeSH)</term>
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<front><div type="abstract" xml:lang="en">Arbuscular mycorrhizal fungi (AMF) are essential constituents of most terrestrial ecosystems. AMF species differ in terms of propagation strategies and the major propagules they form. This study compared the AMF community composition of different propagule fractions - colonized roots, spores and extraradical mycelium (ERM) - associated with five Mediterranean plant species in Sierra de Baza Natural Park (Granada, Spain). AMF were identified using 454 pyrosequencing of the SSU rRNA gene. A total of 96 AMF phylogroups [virtual taxa (VT)] were detected in the study site, including 31 novel VT. After per-sample sequencing depth standardization, 71 VT were recorded from plant roots, and 47 from each of the spore and ERM fractions. AMF communities differed significantly among the propagule fractions, and the root-colonizing fraction differed among host plant species. Indicator VT were detected for the root (13 Glomus VT), spore (Paraglomus VT281, VT336, Pacispora VT284) and ERM (Diversispora VT62) fractions. This study provides detailed evidence from a natural system that AMF taxa are differentially allocated among soil mycelium, soil spores and colonized root propagules. This has important implications for interpreting AMF diversity surveys and designing applications of AMF in vegetation restoration. </div>
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<Abstract><AbstractText>Arbuscular mycorrhizal fungi (AMF) are essential constituents of most terrestrial ecosystems. AMF species differ in terms of propagation strategies and the major propagules they form. This study compared the AMF community composition of different propagule fractions - colonized roots, spores and extraradical mycelium (ERM) - associated with five Mediterranean plant species in Sierra de Baza Natural Park (Granada, Spain). AMF were identified using 454 pyrosequencing of the SSU rRNA gene. A total of 96 AMF phylogroups [virtual taxa (VT)] were detected in the study site, including 31 novel VT. After per-sample sequencing depth standardization, 71 VT were recorded from plant roots, and 47 from each of the spore and ERM fractions. AMF communities differed significantly among the propagule fractions, and the root-colonizing fraction differed among host plant species. Indicator VT were detected for the root (13 Glomus VT), spore (Paraglomus VT281, VT336, Pacispora VT284) and ERM (Diversispora VT62) fractions. This study provides detailed evidence from a natural system that AMF taxa are differentially allocated among soil mycelium, soil spores and colonized root propagules. This has important implications for interpreting AMF diversity surveys and designing applications of AMF in vegetation restoration. </AbstractText>
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<tree><country name="Espagne"><region name="Andalousie"><name sortKey="Varela Cervero, Sara" sort="Varela Cervero, Sara" uniqKey="Varela Cervero S" first="Sara" last="Varela-Cervero">Sara Varela-Cervero</name>
</region>
<name sortKey="Azc N Aguilar, Concepci N" sort="Azc N Aguilar, Concepci N" uniqKey="Azc N Aguilar C" first="Concepci N" last="Azc N-Aguilar">Concepci N Azc N-Aguilar</name>
<name sortKey="Barea, Jose Miguel" sort="Barea, Jose Miguel" uniqKey="Barea J" first="José Miguel" last="Barea">José Miguel Barea</name>
</country>
<country name="Estonie"><noRegion><name sortKey="Vasar, Martti" sort="Vasar, Martti" uniqKey="Vasar M" first="Martti" last="Vasar">Martti Vasar</name>
</noRegion>
<name sortKey="Davison, John" sort="Davison, John" uniqKey="Davison J" first="John" last="Davison">John Davison</name>
<name sortKey="Opik, Maarja" sort="Opik, Maarja" uniqKey="Opik M" first="Maarja" last="Öpik">Maarja Öpik</name>
</country>
</tree>
</affiliations>
</record>
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