Bacterial communities associated with tuberculate ectomycorrhizae of Rhizopogon spp.
Identifieur interne : 002A98 ( Main/Exploration ); précédent : 002A97; suivant : 002A99Bacterial communities associated with tuberculate ectomycorrhizae of Rhizopogon spp.
Auteurs : Annette M. Kretzer [États-Unis] ; Zachary R. King [États-Unis] ; Shasha Bai [États-Unis]Source :
- Mycorrhiza [ 1432-1890 ] ; 2009.
Descripteurs français
- KwdFr :
- ARN ribosomique 16S (génétique), Bactéries (génétique), Bactéries (isolement et purification), Basidiomycota (génétique), Basidiomycota (isolement et purification), Basidiomycota (physiologie), Données de séquences moléculaires (MeSH), Mycorhizes (génétique), Mycorhizes (isolement et purification), Mycorhizes (physiologie), Phénomènes physiologiques bactériens (MeSH), Symbiose (MeSH).
- MESH :
- génétique : ARN ribosomique 16S, Bactéries, Basidiomycota, Mycorhizes.
- isolement et purification : Bactéries, Basidiomycota, Mycorhizes.
- physiologie : Basidiomycota, Mycorhizes.
- Données de séquences moléculaires, Phénomènes physiologiques bactériens, Symbiose.
English descriptors
- KwdEn :
- Bacteria (genetics), Bacteria (isolation & purification), Bacterial Physiological Phenomena (MeSH), Basidiomycota (genetics), Basidiomycota (isolation & purification), Basidiomycota (physiology), Molecular Sequence Data (MeSH), Mycorrhizae (genetics), Mycorrhizae (isolation & purification), Mycorrhizae (physiology), RNA, Ribosomal, 16S (genetics), Symbiosis (MeSH).
- MESH :
- chemical , genetics : RNA, Ribosomal, 16S.
- genetics : Bacteria, Basidiomycota, Mycorrhizae.
- isolation & purification : Bacteria, Basidiomycota, Mycorrhizae.
- physiology : Basidiomycota, Mycorrhizae.
- Bacterial Physiological Phenomena, Molecular Sequence Data, Symbiosis.
Abstract
We have previously reported the design of a new PCR primer pair that allows amplification of a broad range of eubacterial 16S rDNA sequences from ectomycorrhizae (ECM) without co-amplification of plastid or mitochondrial sequences. Here, we report using a similar primer combination to generate three small 16S rDNA libraries from tuberculate ECM of Rhizopogon spp., two from R. vinicolor ECM (libraries Rvi18 and Rvi24) and one from R. vesiculosus ECM (library Rve13). At the class level, libraries were dominated by sequences from the Alphaproteobacteria, Gammaproteobacteria, and Acidobacteria, with some Sphingobacteria, Actinobacteria, Planctomycetacia, and Verrucomicrobiae present as well. Based on the parsimony test implemented in TreeClimber, libraries Rvi18 and Rvi24 were significantly different from Rve13 at the alpha = 0.05 level, while they were only borderline significantly different from each other (p = 0.07). Differences between Rvi and Rve libraries were primarily due to differences in the number of Alphaproteobacteria sequences and specifically sequences from the Rhizobiales, which were more common in the Rve13 library. It is currently unknown what drives these differences between eubacterial communities. Amplification success for eubacterial 16S rDNA sequences was generally low in this study indicating low abundance of bacteria on tuberculate ECM. Attempts to amplify nitrogenase reductase (nifH) sequences were unsuccessful.
DOI: 10.1007/s00572-008-0213-2
PubMed: 19066986
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Here, we report using a similar primer combination to generate three small 16S rDNA libraries from tuberculate ECM of Rhizopogon spp., two from R. vinicolor ECM (libraries Rvi18 and Rvi24) and one from R. vesiculosus ECM (library Rve13). At the class level, libraries were dominated by sequences from the Alphaproteobacteria, Gammaproteobacteria, and Acidobacteria, with some Sphingobacteria, Actinobacteria, Planctomycetacia, and Verrucomicrobiae present as well. Based on the parsimony test implemented in TreeClimber, libraries Rvi18 and Rvi24 were significantly different from Rve13 at the alpha = 0.05 level, while they were only borderline significantly different from each other (p = 0.07). Differences between Rvi and Rve libraries were primarily due to differences in the number of Alphaproteobacteria sequences and specifically sequences from the Rhizobiales, which were more common in the Rve13 library. It is currently unknown what drives these differences between eubacterial communities. Amplification success for eubacterial 16S rDNA sequences was generally low in this study indicating low abundance of bacteria on tuberculate ECM. Attempts to amplify nitrogenase reductase (nifH) sequences were unsuccessful.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">19066986</PMID><DateCompleted><Year>2009</Year><Month>06</Month><Day>15</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-1890</ISSN><JournalIssue CitedMedium="Internet"><Volume>19</Volume><Issue>4</Issue><PubDate><Year>2009</Year><Month>Apr</Month></PubDate></JournalIssue><Title>Mycorrhiza</Title><ISOAbbreviation>Mycorrhiza</ISOAbbreviation></Journal><ArticleTitle>Bacterial communities associated with tuberculate ectomycorrhizae of Rhizopogon spp.</ArticleTitle><Pagination><MedlinePgn>277-282</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00572-008-0213-2</ELocationID><Abstract><AbstractText>We have previously reported the design of a new PCR primer pair that allows amplification of a broad range of eubacterial 16S rDNA sequences from ectomycorrhizae (ECM) without co-amplification of plastid or mitochondrial sequences. Here, we report using a similar primer combination to generate three small 16S rDNA libraries from tuberculate ECM of Rhizopogon spp., two from R. vinicolor ECM (libraries Rvi18 and Rvi24) and one from R. vesiculosus ECM (library Rve13). At the class level, libraries were dominated by sequences from the Alphaproteobacteria, Gammaproteobacteria, and Acidobacteria, with some Sphingobacteria, Actinobacteria, Planctomycetacia, and Verrucomicrobiae present as well. Based on the parsimony test implemented in TreeClimber, libraries Rvi18 and Rvi24 were significantly different from Rve13 at the alpha = 0.05 level, while they were only borderline significantly different from each other (p = 0.07). Differences between Rvi and Rve libraries were primarily due to differences in the number of Alphaproteobacteria sequences and specifically sequences from the Rhizobiales, which were more common in the Rve13 library. It is currently unknown what drives these differences between eubacterial communities. Amplification success for eubacterial 16S rDNA sequences was generally low in this study indicating low abundance of bacteria on tuberculate ECM. Attempts to amplify nitrogenase reductase (nifH) sequences were unsuccessful.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Kretzer</LastName><ForeName>Annette M</ForeName><Initials>AM</Initials><AffiliationInfo><Affiliation>College of Environmental Science and Forestry, State University of New York, 1 Forestry Drive, Syracuse, NY, 13210, USA. kretzera@esf.edu.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>King</LastName><ForeName>Zachary R</ForeName><Initials>ZR</Initials><AffiliationInfo><Affiliation>College of Environmental Science and Forestry, State University of New York, 1 Forestry Drive, Syracuse, NY, 13210, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bai</LastName><ForeName>Shasha</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>College of Environmental Science and Forestry, State University of New York, 1 Forestry Drive, Syracuse, NY, 13210, 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IdType="pii">10.1007/s00572-008-0213-2</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>FEMS Microbiol Ecol. 2006 Apr;56(1):34-43</Citation><ArticleIdList><ArticleId IdType="pubmed">16542403</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2003 May-Jun;95(3):480-7</Citation><ArticleIdList><ArticleId IdType="pubmed">21156637</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2003 Jul;69(7):4243-8</Citation><ArticleIdList><ArticleId IdType="pubmed">12839806</ArticleId></ArticleIdList></Reference><Reference><Citation>J Bacteriol. 1998 Sep;180(18):4765-74</Citation><ArticleIdList><ArticleId IdType="pubmed">9733676</ArticleId></ArticleIdList></Reference><Reference><Citation>New Phytol. 2007;176(1):22-36</Citation><ArticleIdList><ArticleId IdType="pubmed">17803639</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Ecol. 2006 Sep;57(3):389-95</Citation><ArticleIdList><ArticleId IdType="pubmed">16907753</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Lett. 2008 May;282(2):196-204</Citation><ArticleIdList><ArticleId IdType="pubmed">18355286</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2005 Jul;14(8):2259-68</Citation><ArticleIdList><ArticleId IdType="pubmed">15969712</ArticleId></ArticleIdList></Reference><Reference><Citation>Microbiol Rev. 1995 Mar;59(1):143-69</Citation><ArticleIdList><ArticleId IdType="pubmed">7535888</ArticleId></ArticleIdList></Reference><Reference><Citation>Microb Ecol. 2001 Apr;41(3):252-263</Citation><ArticleIdList><ArticleId IdType="pubmed">11391463</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Lett. 2005 May 1;246(1):33-8</Citation><ArticleIdList><ArticleId IdType="pubmed">15869959</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2007 Aug;73(16):5261-7</Citation><ArticleIdList><ArticleId IdType="pubmed">17586664</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 1996 Mar;62(3):766-71</Citation><ArticleIdList><ArticleId IdType="pubmed">8975607</ArticleId></ArticleIdList></Reference><Reference><Citation>Biotechniques. 2003 Nov;35(5):996-1002, 1004-5</Citation><ArticleIdList><ArticleId IdType="pubmed">14628674</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2006 Apr;72(4):2379-84</Citation><ArticleIdList><ArticleId IdType="pubmed">16597933</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2002 Jul-Aug;94(4):607-19</Citation><ArticleIdList><ArticleId IdType="pubmed">21156534</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2000 Jul;66(7):3119-24</Citation><ArticleIdList><ArticleId IdType="pubmed">10877818</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2005 Aug;71(8):4721-7</Citation><ArticleIdList><ArticleId IdType="pubmed">16085868</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Ecol. 2008 Aug;65(2):220-8</Citation><ArticleIdList><ArticleId IdType="pubmed">18631250</ArticleId></ArticleIdList></Reference><Reference><Citation>Environ Microbiol. 2005 Nov;7(11):1786-95</Citation><ArticleIdList><ArticleId IdType="pubmed">16232293</ArticleId></ArticleIdList></Reference><Reference><Citation>J Microbiol Methods. 2004 Oct;59(1):81-9</Citation><ArticleIdList><ArticleId IdType="pubmed">15325755</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Ecol. 2008 Aug;65(2):299-309</Citation><ArticleIdList><ArticleId IdType="pubmed">18459969</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Rev. 2005 Sep;29(4):795-811</Citation><ArticleIdList><ArticleId IdType="pubmed">16102603</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 1992 Sep;9(5):836-55</Citation><ArticleIdList><ArticleId IdType="pubmed">1382179</ArticleId></ArticleIdList></Reference><Reference><Citation>Environ Microbiol. 2006 Dec;8(12):2224-30</Citation><ArticleIdList><ArticleId IdType="pubmed">17107563</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 1999 Feb;65(2):374-80</Citation><ArticleIdList><ArticleId IdType="pubmed">9925556</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 1993 Apr;2(2):113-8</Citation><ArticleIdList><ArticleId IdType="pubmed">8180733</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country></list><tree><country name="États-Unis"><noRegion><name sortKey="Kretzer, Annette M" sort="Kretzer, Annette M" uniqKey="Kretzer A" first="Annette M" last="Kretzer">Annette M. Kretzer</name></noRegion><name sortKey="Bai, Shasha" sort="Bai, Shasha" uniqKey="Bai S" first="Shasha" last="Bai">Shasha Bai</name><name sortKey="King, Zachary R" sort="King, Zachary R" uniqKey="King Z" first="Zachary R" last="King">Zachary R. King</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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