MycorrhizaeV1, Main, Exploration, bibRecord, 002199

A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixation.

Identifieur interne : 002199 ( Main/Exploration ); précédent : 002198; suivant : 002200

A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixation.

Auteurs : Catalina I. Pislariu [États-Unis] ; Jeremy D. Murray ; Jiangqi Wen ; Viviane Cosson ; Rajasekhara Reddy Duvvuru Muni ; Mingyi Wang ; Vagner A. Benedito ; Andry Andriankaja ; Xiaofei Cheng ; Ivone Torres Jerez ; Samuel Mondy ; Shulan Zhang ; Mark E. Taylor ; Million Tadege ; Pascal Ratet ; Kirankumar S. Mysore ; Rujin Chen ; Michael K. Udvardi

Source :

Plant physiology [ 1532-2548 ] ; 2012.

RBID : pubmed:22679222

Descripteurs français

KwdFr :
- Fixation de l'azote (génétique), Gènes de plante (génétique), Medicago truncatula (génétique), Medicago truncatula (microbiologie), Medicago truncatula (physiologie), Morphogenèse (génétique), Mutagenèse par insertion (génétique), Mutation (génétique), Mycorhizes (physiologie), Nodulation racinaire (génétique), Nodules racinaires de plante (croissance et développement), Phénotype (MeSH), Rétroéléments (génétique), Symbiose (génétique), Tabac (génétique).
MESH :
- croissance et développement : Nodules racinaires de plante.
- génétique : Fixation de l'azote, Gènes de plante, Medicago truncatula, Morphogenèse, Mutagenèse par insertion, Mutation, Nodulation racinaire, Rétroéléments, Symbiose, Tabac.
- microbiologie : Medicago truncatula.
- physiologie : Medicago truncatula, Mycorhizes.
- Phénotype.

English descriptors

KwdEn :
- Genes, Plant (genetics), Medicago truncatula (genetics), Medicago truncatula (microbiology), Medicago truncatula (physiology), Morphogenesis (genetics), Mutagenesis, Insertional (genetics), Mutation (genetics), Mycorrhizae (physiology), Nitrogen Fixation (genetics), Phenotype (MeSH), Plant Root Nodulation (genetics), Retroelements (genetics), Root Nodules, Plant (growth & development), Symbiosis (genetics), Tobacco (genetics).
MESH :
- chemical , genetics : Retroelements.
- genetics : Genes, Plant, Medicago truncatula, Morphogenesis, Mutagenesis, Insertional, Mutation, Nitrogen Fixation, Plant Root Nodulation, Symbiosis, Tobacco.
- growth & development : Root Nodules, Plant.
- microbiology : Medicago truncatula.
- physiology : Medicago truncatula, Mycorrhizae.
- Phenotype.

Abstract

A Tnt1-insertion mutant population of Medicago truncatula ecotype R108 was screened for defects in nodulation and symbiotic nitrogen fixation. Primary screening of 9,300 mutant lines yielded 317 lines with putative defects in nodule development and/or nitrogen fixation. Of these, 230 lines were rescreened, and 156 lines were confirmed with defective symbiotic nitrogen fixation. Mutants were sorted into six distinct phenotypic categories: 72 nonnodulating mutants (Nod-), 51 mutants with totally ineffective nodules (Nod+ Fix-), 17 mutants with partially ineffective nodules (Nod+ Fix+/-), 27 mutants defective in nodule emergence, elongation, and nitrogen fixation (Nod+/- Fix-), one mutant with delayed and reduced nodulation but effective in nitrogen fixation (dNod+/- Fix+), and 11 supernodulating mutants (Nod++Fix+/-). A total of 2,801 flanking sequence tags were generated from the 156 symbiotic mutant lines. Analysis of flanking sequence tags revealed 14 insertion alleles of the following known symbiotic genes: NODULE INCEPTION (NIN), DOESN'T MAKE INFECTIONS3 (DMI3/CCaMK), ERF REQUIRED FOR NODULATION, and SUPERNUMERARY NODULES (SUNN). In parallel, a polymerase chain reaction-based strategy was used to identify Tnt1 insertions in known symbiotic genes, which revealed 25 additional insertion alleles in the following genes: DMI1, DMI2, DMI3, NIN, NODULATION SIGNALING PATHWAY1 (NSP1), NSP2, SUNN, and SICKLE. Thirty-nine Nod- lines were also screened for arbuscular mycorrhizal symbiosis phenotypes, and 30 mutants exhibited defects in arbuscular mycorrhizal symbiosis. Morphological and developmental features of several new symbiotic mutants are reported. The collection of mutants described here is a source of novel alleles of known symbiotic genes and a resource for cloning novel symbiotic genes via Tnt1 tagging.

DOI: 10.1104/pp.112.197061
PubMed: 22679222
PubMed Central: PMC3425206

Affiliations:

États-Unis

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 001F49
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Le document en format XML

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<affiliation wicri:level="1"><nlm:affiliation>Plant Biology Division, Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
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<author><name sortKey="Wen, Jiangqi" sort="Wen, Jiangqi" uniqKey="Wen J" first="Jiangqi" last="Wen">Jiangqi Wen</name>
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<author><name sortKey="Cosson, Viviane" sort="Cosson, Viviane" uniqKey="Cosson V" first="Viviane" last="Cosson">Viviane Cosson</name>
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<author><name sortKey="Muni, Rajasekhara Reddy Duvvuru" sort="Muni, Rajasekhara Reddy Duvvuru" uniqKey="Muni R" first="Rajasekhara Reddy Duvvuru" last="Muni">Rajasekhara Reddy Duvvuru Muni</name>
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<author><name sortKey="Wang, Mingyi" sort="Wang, Mingyi" uniqKey="Wang M" first="Mingyi" last="Wang">Mingyi Wang</name>
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<author><name sortKey="Benedito, Vagner A" sort="Benedito, Vagner A" uniqKey="Benedito V" first="Vagner A" last="Benedito">Vagner A. Benedito</name>
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<author><name sortKey="Andriankaja, Andry" sort="Andriankaja, Andry" uniqKey="Andriankaja A" first="Andry" last="Andriankaja">Andry Andriankaja</name>
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<author><name sortKey="Cheng, Xiaofei" sort="Cheng, Xiaofei" uniqKey="Cheng X" first="Xiaofei" last="Cheng">Xiaofei Cheng</name>
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<author><name sortKey="Jerez, Ivone Torres" sort="Jerez, Ivone Torres" uniqKey="Jerez I" first="Ivone Torres" last="Jerez">Ivone Torres Jerez</name>
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<author><name sortKey="Mondy, Samuel" sort="Mondy, Samuel" uniqKey="Mondy S" first="Samuel" last="Mondy">Samuel Mondy</name>
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<author><name sortKey="Zhang, Shulan" sort="Zhang, Shulan" uniqKey="Zhang S" first="Shulan" last="Zhang">Shulan Zhang</name>
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<author><name sortKey="Taylor, Mark E" sort="Taylor, Mark E" uniqKey="Taylor M" first="Mark E" last="Taylor">Mark E. Taylor</name>
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<author><name sortKey="Tadege, Million" sort="Tadege, Million" uniqKey="Tadege M" first="Million" last="Tadege">Million Tadege</name>
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<author><name sortKey="Ratet, Pascal" sort="Ratet, Pascal" uniqKey="Ratet P" first="Pascal" last="Ratet">Pascal Ratet</name>
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<author><name sortKey="Mysore, Kirankumar S" sort="Mysore, Kirankumar S" uniqKey="Mysore K" first="Kirankumar S" last="Mysore">Kirankumar S. Mysore</name>
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<author><name sortKey="Chen, Rujin" sort="Chen, Rujin" uniqKey="Chen R" first="Rujin" last="Chen">Rujin Chen</name>
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<author><name sortKey="Udvardi, Michael K" sort="Udvardi, Michael K" uniqKey="Udvardi M" first="Michael K" last="Udvardi">Michael K. Udvardi</name>
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<series><title level="j">Plant physiology</title>
<idno type="eISSN">1532-2548</idno>
<imprint><date when="2012" type="published">2012</date>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Genes, Plant (genetics)</term>
<term>Medicago truncatula (genetics)</term>
<term>Medicago truncatula (microbiology)</term>
<term>Medicago truncatula (physiology)</term>
<term>Morphogenesis (genetics)</term>
<term>Mutagenesis, Insertional (genetics)</term>
<term>Mutation (genetics)</term>
<term>Mycorrhizae (physiology)</term>
<term>Nitrogen Fixation (genetics)</term>
<term>Phenotype (MeSH)</term>
<term>Plant Root Nodulation (genetics)</term>
<term>Retroelements (genetics)</term>
<term>Root Nodules, Plant (growth & development)</term>
<term>Symbiosis (genetics)</term>
<term>Tobacco (genetics)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Fixation de l'azote (génétique)</term>
<term>Gènes de plante (génétique)</term>
<term>Medicago truncatula (génétique)</term>
<term>Medicago truncatula (microbiologie)</term>
<term>Medicago truncatula (physiologie)</term>
<term>Morphogenèse (génétique)</term>
<term>Mutagenèse par insertion (génétique)</term>
<term>Mutation (génétique)</term>
<term>Mycorhizes (physiologie)</term>
<term>Nodulation racinaire (génétique)</term>
<term>Nodules racinaires de plante (croissance et développement)</term>
<term>Phénotype (MeSH)</term>
<term>Rétroéléments (génétique)</term>
<term>Symbiose (génétique)</term>
<term>Tabac (génétique)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Retroelements</term>
</keywords>
<keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Nodules racinaires de plante</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Genes, Plant</term>
<term>Medicago truncatula</term>
<term>Morphogenesis</term>
<term>Mutagenesis, Insertional</term>
<term>Mutation</term>
<term>Nitrogen Fixation</term>
<term>Plant Root Nodulation</term>
<term>Symbiosis</term>
<term>Tobacco</term>
</keywords>
<keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Root Nodules, Plant</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Fixation de l'azote</term>
<term>Gènes de plante</term>
<term>Medicago truncatula</term>
<term>Morphogenèse</term>
<term>Mutagenèse par insertion</term>
<term>Mutation</term>
<term>Nodulation racinaire</term>
<term>Rétroéléments</term>
<term>Symbiose</term>
<term>Tabac</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Medicago truncatula</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Medicago truncatula</term>
</keywords>
<keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Medicago truncatula</term>
<term>Mycorhizes</term>
</keywords>
<keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Medicago truncatula</term>
<term>Mycorrhizae</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Phenotype</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Phénotype</term>
</keywords>
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<front><div type="abstract" xml:lang="en">A Tnt1-insertion mutant population of Medicago truncatula ecotype R108 was screened for defects in nodulation and symbiotic nitrogen fixation. Primary screening of 9,300 mutant lines yielded 317 lines with putative defects in nodule development and/or nitrogen fixation. Of these, 230 lines were rescreened, and 156 lines were confirmed with defective symbiotic nitrogen fixation. Mutants were sorted into six distinct phenotypic categories: 72 nonnodulating mutants (Nod-), 51 mutants with totally ineffective nodules (Nod+ Fix-), 17 mutants with partially ineffective nodules (Nod+ Fix+/-), 27 mutants defective in nodule emergence, elongation, and nitrogen fixation (Nod+/- Fix-), one mutant with delayed and reduced nodulation but effective in nitrogen fixation (dNod+/- Fix+), and 11 supernodulating mutants (Nod++Fix+/-). A total of 2,801 flanking sequence tags were generated from the 156 symbiotic mutant lines. Analysis of flanking sequence tags revealed 14 insertion alleles of the following known symbiotic genes: NODULE INCEPTION (NIN), DOESN'T MAKE INFECTIONS3 (DMI3/CCaMK), ERF REQUIRED FOR NODULATION, and SUPERNUMERARY NODULES (SUNN). In parallel, a polymerase chain reaction-based strategy was used to identify Tnt1 insertions in known symbiotic genes, which revealed 25 additional insertion alleles in the following genes: DMI1, DMI2, DMI3, NIN, NODULATION SIGNALING PATHWAY1 (NSP1), NSP2, SUNN, and SICKLE. Thirty-nine Nod- lines were also screened for arbuscular mycorrhizal symbiosis phenotypes, and 30 mutants exhibited defects in arbuscular mycorrhizal symbiosis. Morphological and developmental features of several new symbiotic mutants are reported. The collection of mutants described here is a source of novel alleles of known symbiotic genes and a resource for cloning novel symbiotic genes via Tnt1 tagging.</div>
</front>
</TEI>
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<DateCompleted><Year>2012</Year>
<Month>12</Month>
<Day>10</Day>
</DateCompleted>
<DateRevised><Year>2018</Year>
<Month>11</Month>
<Day>13</Day>
</DateRevised>
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<JournalIssue CitedMedium="Internet"><Volume>159</Volume>
<Issue>4</Issue>
<PubDate><Year>2012</Year>
<Month>Aug</Month>
</PubDate>
</JournalIssue>
<Title>Plant physiology</Title>
<ISOAbbreviation>Plant Physiol</ISOAbbreviation>
</Journal>
<ArticleTitle>A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixation.</ArticleTitle>
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<ELocationID EIdType="doi" ValidYN="Y">10.1104/pp.112.197061</ELocationID>
<Abstract><AbstractText>A Tnt1-insertion mutant population of Medicago truncatula ecotype R108 was screened for defects in nodulation and symbiotic nitrogen fixation. Primary screening of 9,300 mutant lines yielded 317 lines with putative defects in nodule development and/or nitrogen fixation. Of these, 230 lines were rescreened, and 156 lines were confirmed with defective symbiotic nitrogen fixation. Mutants were sorted into six distinct phenotypic categories: 72 nonnodulating mutants (Nod-), 51 mutants with totally ineffective nodules (Nod+ Fix-), 17 mutants with partially ineffective nodules (Nod+ Fix+/-), 27 mutants defective in nodule emergence, elongation, and nitrogen fixation (Nod+/- Fix-), one mutant with delayed and reduced nodulation but effective in nitrogen fixation (dNod+/- Fix+), and 11 supernodulating mutants (Nod++Fix+/-). A total of 2,801 flanking sequence tags were generated from the 156 symbiotic mutant lines. Analysis of flanking sequence tags revealed 14 insertion alleles of the following known symbiotic genes: NODULE INCEPTION (NIN), DOESN'T MAKE INFECTIONS3 (DMI3/CCaMK), ERF REQUIRED FOR NODULATION, and SUPERNUMERARY NODULES (SUNN). In parallel, a polymerase chain reaction-based strategy was used to identify Tnt1 insertions in known symbiotic genes, which revealed 25 additional insertion alleles in the following genes: DMI1, DMI2, DMI3, NIN, NODULATION SIGNALING PATHWAY1 (NSP1), NSP2, SUNN, and SICKLE. Thirty-nine Nod- lines were also screened for arbuscular mycorrhizal symbiosis phenotypes, and 30 mutants exhibited defects in arbuscular mycorrhizal symbiosis. Morphological and developmental features of several new symbiotic mutants are reported. The collection of mutants described here is a source of novel alleles of known symbiotic genes and a resource for cloning novel symbiotic genes via Tnt1 tagging.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Pislariu</LastName>
<ForeName>Catalina I</ForeName>
<Initials>CI</Initials>
<AffiliationInfo><Affiliation>Plant Biology Division, Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Murray</LastName>
<ForeName>Jeremy D</ForeName>
<Initials>JD</Initials>
</Author>
<Author ValidYN="Y"><LastName>Wen</LastName>
<ForeName>JiangQi</ForeName>
<Initials>J</Initials>
</Author>
<Author ValidYN="Y"><LastName>Cosson</LastName>
<ForeName>Viviane</ForeName>
<Initials>V</Initials>
</Author>
<Author ValidYN="Y"><LastName>Muni</LastName>
<ForeName>RajaSekhara Reddy Duvvuru</ForeName>
<Initials>RR</Initials>
</Author>
<Author ValidYN="Y"><LastName>Wang</LastName>
<ForeName>Mingyi</ForeName>
<Initials>M</Initials>
</Author>
<Author ValidYN="Y"><LastName>Benedito</LastName>
<ForeName>Vagner A</ForeName>
<Initials>VA</Initials>
</Author>
<Author ValidYN="Y"><LastName>Andriankaja</LastName>
<ForeName>Andry</ForeName>
<Initials>A</Initials>
</Author>
<Author ValidYN="Y"><LastName>Cheng</LastName>
<ForeName>Xiaofei</ForeName>
<Initials>X</Initials>
</Author>
<Author ValidYN="Y"><LastName>Jerez</LastName>
<ForeName>Ivone Torres</ForeName>
<Initials>IT</Initials>
</Author>
<Author ValidYN="Y"><LastName>Mondy</LastName>
<ForeName>Samuel</ForeName>
<Initials>S</Initials>
</Author>
<Author ValidYN="Y"><LastName>Zhang</LastName>
<ForeName>Shulan</ForeName>
<Initials>S</Initials>
</Author>
<Author ValidYN="Y"><LastName>Taylor</LastName>
<ForeName>Mark E</ForeName>
<Initials>ME</Initials>
</Author>
<Author ValidYN="Y"><LastName>Tadege</LastName>
<ForeName>Million</ForeName>
<Initials>M</Initials>
</Author>
<Author ValidYN="Y"><LastName>Ratet</LastName>
<ForeName>Pascal</ForeName>
<Initials>P</Initials>
</Author>
<Author ValidYN="Y"><LastName>Mysore</LastName>
<ForeName>Kirankumar S</ForeName>
<Initials>KS</Initials>
</Author>
<Author ValidYN="Y"><LastName>Chen</LastName>
<ForeName>Rujin</ForeName>
<Initials>R</Initials>
</Author>
<Author ValidYN="Y"><LastName>Udvardi</LastName>
<ForeName>Michael K</ForeName>
<Initials>MK</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2012</Year>
<Month>06</Month>
<Day>07</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>United States</Country>
<MedlineTA>Plant Physiol</MedlineTA>
<NlmUniqueID>0401224</NlmUniqueID>
<ISSNLinking>0032-0889</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D018626">Retroelements</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D017343" MajorTopicYN="N">Genes, Plant</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D046913" MajorTopicYN="N">Medicago truncatula</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
<QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D009024" MajorTopicYN="N">Morphogenesis</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016254" MajorTopicYN="N">Mutagenesis, Insertional</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D009154" MajorTopicYN="N">Mutation</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
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<name sortKey="Taylor, Mark E" sort="Taylor, Mark E" uniqKey="Taylor M" first="Mark E" last="Taylor">Mark E. Taylor</name>
<name sortKey="Udvardi, Michael K" sort="Udvardi, Michael K" uniqKey="Udvardi M" first="Michael K" last="Udvardi">Michael K. Udvardi</name>
<name sortKey="Wang, Mingyi" sort="Wang, Mingyi" uniqKey="Wang M" first="Mingyi" last="Wang">Mingyi Wang</name>
<name sortKey="Wen, Jiangqi" sort="Wen, Jiangqi" uniqKey="Wen J" first="Jiangqi" last="Wen">Jiangqi Wen</name>
<name sortKey="Zhang, Shulan" sort="Zhang, Shulan" uniqKey="Zhang S" first="Shulan" last="Zhang">Shulan Zhang</name>
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   |texte=   A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixation.
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A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixation.

A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixation.

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