MycorrhizaeV1, Main, Exploration, bibRecord, 001274

Arbuscular mycorrhizal fungal communities and Rhizophagus irregularis populations shift in response to short-term ploughing and fertilisation in a buffer strip.

Identifieur interne : 001274 ( Main/Exploration ); précédent : 001273; suivant : 001275

Arbuscular mycorrhizal fungal communities and Rhizophagus irregularis populations shift in response to short-term ploughing and fertilisation in a buffer strip.

Auteurs : M. Peyret-Guzzon [France] ; H. Stockinger [France] ; M-L Bouffaud [France] ; P. Farcy [France] ; D. Wipf [France] ; D. Redecker [France]

Source :

Mycorrhiza [ 1432-1890 ] ; 2016.

RBID : pubmed:26023005

Descripteurs français

KwdFr :
- ADN fongique (génétique), ADN mitochondrial (génétique), ADN ribosomique (génétique), Agriculture (MeSH), Analyse de séquence d'ADN (MeSH), Engrais (MeSH), Glomeromycota (génétique), Glomeromycota (métabolisme), Glomeromycota (physiologie), Grande sous-unité du ribosome (génétique), Microbiologie du sol (MeSH), Mycorhizes (métabolisme), Mycorhizes (physiologie), Prairie (MeSH), RNA polymerase II (génétique), Racines de plante (microbiologie), Ribosomes mitochondriaux (microbiologie), Sol (composition chimique), Symbiose (MeSH), Variation génétique (MeSH).
MESH :
- composition chimique : Sol.
- génétique : ADN fongique, ADN mitochondrial, ADN ribosomique, Glomeromycota, Grande sous-unité du ribosome, RNA polymerase II.
- microbiologie : Racines de plante, Ribosomes mitochondriaux.
- métabolisme : Glomeromycota, Mycorhizes.
- physiologie : Glomeromycota, Mycorhizes.
- Agriculture, Analyse de séquence d'ADN, Engrais, Microbiologie du sol, Prairie, Symbiose, Variation génétique.

English descriptors

KwdEn :
- Agriculture (MeSH), DNA, Fungal (genetics), DNA, Mitochondrial (genetics), DNA, Ribosomal (genetics), Fertilizers (MeSH), Genetic Variation (MeSH), Glomeromycota (genetics), Glomeromycota (metabolism), Glomeromycota (physiology), Grassland (MeSH), Mitochondrial Ribosomes (microbiology), Mycorrhizae (metabolism), Mycorrhizae (physiology), Plant Roots (microbiology), RNA Polymerase II (genetics), Ribosome Subunits, Large (genetics), Sequence Analysis, DNA (MeSH), Soil (chemistry), Soil Microbiology (MeSH), Symbiosis (MeSH).
MESH :
- chemical , chemistry : Soil.
- chemical , genetics : DNA, Fungal, DNA, Mitochondrial, DNA, Ribosomal, RNA Polymerase II.
- genetics : Glomeromycota, Ribosome Subunits, Large.
- metabolism : Glomeromycota, Mycorrhizae.
- microbiology : Mitochondrial Ribosomes, Plant Roots.
- physiology : Glomeromycota, Mycorrhizae.
- Agriculture, Fertilizers, Genetic Variation, Grassland, Sequence Analysis, DNA, Soil Microbiology, Symbiosis.

Abstract

Short-term effects of soil physical disturbance by ploughing and nitrogen and phosphate fertilisation on arbuscular mycorrhizal fungal (AMF) communities and on intraspecific populations of Rhizophagus irregularis in a buffer strip surrounded by arable fields were studied. Pre-grown Plantago lanceolata plantlets were transplanted into fertilised and/or ploughed experimental plots. After 3 months, the glomeromycotan communities in the roots of these trap plants were analysed using 454 pyrosequencing of a fragment of the RNA polymerase II gene (RPB1). Intraspecific populations of R. irregularis were studied by restriction fragment length polymorphism (RFLP) analysis of the mitochondrial large ribosomal subunit (mtLSU) gene. Soil disturbance significantly increased the diversity of species-level molecular taxa (MTs) and altered community structure, whilst fertilisation alone had no significant effect, unless coupled with ploughing. At the population level, the expected shift from genotypes of R. irregularis typically found in grasslands to those usually found in arable sites was only partially observed. In conclusion, in the short-term, physical soil disturbance, as well as nitrogen fertilisation when coupled with physical soil disturbance, affected AMF community and to a smaller extent population composition.

DOI: 10.1007/s00572-015-0644-5
PubMed: 26023005

Affiliations:

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 001442
to stream Main, to step Curation: 001442

Le document en format XML

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<term>DNA, Fungal (genetics)</term>
<term>DNA, Mitochondrial (genetics)</term>
<term>DNA, Ribosomal (genetics)</term>
<term>Fertilizers (MeSH)</term>
<term>Genetic Variation (MeSH)</term>
<term>Glomeromycota (genetics)</term>
<term>Glomeromycota (metabolism)</term>
<term>Glomeromycota (physiology)</term>
<term>Grassland (MeSH)</term>
<term>Mitochondrial Ribosomes (microbiology)</term>
<term>Mycorrhizae (metabolism)</term>
<term>Mycorrhizae (physiology)</term>
<term>Plant Roots (microbiology)</term>
<term>RNA Polymerase II (genetics)</term>
<term>Ribosome Subunits, Large (genetics)</term>
<term>Sequence Analysis, DNA (MeSH)</term>
<term>Soil (chemistry)</term>
<term>Soil Microbiology (MeSH)</term>
<term>Symbiosis (MeSH)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ADN fongique (génétique)</term>
<term>ADN mitochondrial (génétique)</term>
<term>ADN ribosomique (génétique)</term>
<term>Agriculture (MeSH)</term>
<term>Analyse de séquence d'ADN (MeSH)</term>
<term>Engrais (MeSH)</term>
<term>Glomeromycota (génétique)</term>
<term>Glomeromycota (métabolisme)</term>
<term>Glomeromycota (physiologie)</term>
<term>Grande sous-unité du ribosome (génétique)</term>
<term>Microbiologie du sol (MeSH)</term>
<term>Mycorhizes (métabolisme)</term>
<term>Mycorhizes (physiologie)</term>
<term>Prairie (MeSH)</term>
<term>RNA polymerase II (génétique)</term>
<term>Racines de plante (microbiologie)</term>
<term>Ribosomes mitochondriaux (microbiologie)</term>
<term>Sol (composition chimique)</term>
<term>Symbiose (MeSH)</term>
<term>Variation génétique (MeSH)</term>
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<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Soil</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Fungal</term>
<term>DNA, Mitochondrial</term>
<term>DNA, Ribosomal</term>
<term>RNA Polymerase II</term>
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<keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Sol</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Glomeromycota</term>
<term>Ribosome Subunits, Large</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN fongique</term>
<term>ADN mitochondrial</term>
<term>ADN ribosomique</term>
<term>Glomeromycota</term>
<term>Grande sous-unité du ribosome</term>
<term>RNA polymerase II</term>
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<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Glomeromycota</term>
<term>Mycorrhizae</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Racines de plante</term>
<term>Ribosomes mitochondriaux</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Mitochondrial Ribosomes</term>
<term>Plant Roots</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Glomeromycota</term>
<term>Mycorhizes</term>
</keywords>
<keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Glomeromycota</term>
<term>Mycorhizes</term>
</keywords>
<keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Glomeromycota</term>
<term>Mycorrhizae</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Agriculture</term>
<term>Fertilizers</term>
<term>Genetic Variation</term>
<term>Grassland</term>
<term>Sequence Analysis, DNA</term>
<term>Soil Microbiology</term>
<term>Symbiosis</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Agriculture</term>
<term>Analyse de séquence d'ADN</term>
<term>Engrais</term>
<term>Microbiologie du sol</term>
<term>Prairie</term>
<term>Symbiose</term>
<term>Variation génétique</term>
</keywords>
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<front><div type="abstract" xml:lang="en">Short-term effects of soil physical disturbance by ploughing and nitrogen and phosphate fertilisation on arbuscular mycorrhizal fungal (AMF) communities and on intraspecific populations of Rhizophagus irregularis in a buffer strip surrounded by arable fields were studied. Pre-grown Plantago lanceolata plantlets were transplanted into fertilised and/or ploughed experimental plots. After 3 months, the glomeromycotan communities in the roots of these trap plants were analysed using 454 pyrosequencing of a fragment of the RNA polymerase II gene (RPB1). Intraspecific populations of R. irregularis were studied by restriction fragment length polymorphism (RFLP) analysis of the mitochondrial large ribosomal subunit (mtLSU) gene. Soil disturbance significantly increased the diversity of species-level molecular taxa (MTs) and altered community structure, whilst fertilisation alone had no significant effect, unless coupled with ploughing. At the population level, the expected shift from genotypes of R. irregularis typically found in grasslands to those usually found in arable sites was only partially observed. In conclusion, in the short-term, physical soil disturbance, as well as nitrogen fertilisation when coupled with physical soil disturbance, affected AMF community and to a smaller extent population composition. </div>
</front>
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<Title>Mycorrhiza</Title>
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<ArticleTitle>Arbuscular mycorrhizal fungal communities and Rhizophagus irregularis populations shift in response to short-term ploughing and fertilisation in a buffer strip.</ArticleTitle>
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<Abstract><AbstractText>Short-term effects of soil physical disturbance by ploughing and nitrogen and phosphate fertilisation on arbuscular mycorrhizal fungal (AMF) communities and on intraspecific populations of Rhizophagus irregularis in a buffer strip surrounded by arable fields were studied. Pre-grown Plantago lanceolata plantlets were transplanted into fertilised and/or ploughed experimental plots. After 3 months, the glomeromycotan communities in the roots of these trap plants were analysed using 454 pyrosequencing of a fragment of the RNA polymerase II gene (RPB1). Intraspecific populations of R. irregularis were studied by restriction fragment length polymorphism (RFLP) analysis of the mitochondrial large ribosomal subunit (mtLSU) gene. Soil disturbance significantly increased the diversity of species-level molecular taxa (MTs) and altered community structure, whilst fertilisation alone had no significant effect, unless coupled with ploughing. At the population level, the expected shift from genotypes of R. irregularis typically found in grasslands to those usually found in arable sites was only partially observed. In conclusion, in the short-term, physical soil disturbance, as well as nitrogen fertilisation when coupled with physical soil disturbance, affected AMF community and to a smaller extent population composition. </AbstractText>
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<AffiliationInfo><Affiliation>Université de Bourgogne, UMR 1347 Agroécologie, 17 Rue Sully, BP 86510, 21065, Dijon Cedex, France.</Affiliation>
</AffiliationInfo>
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<AffiliationInfo><Affiliation>Université de Bourgogne, UMR 1347 Agroécologie, 17 Rue Sully, BP 86510, 21065, Dijon Cedex, France. dirk.redecker@dijon.inra.fr.</Affiliation>
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Arbuscular mycorrhizal fungal communities and Rhizophagus irregularis populations shift in response to short-term ploughing and fertilisation in a buffer strip.

Arbuscular mycorrhizal fungal communities and Rhizophagus irregularis populations shift in response to short-term ploughing and fertilisation in a buffer strip.

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