Homogenous stands of a wetland grass living in heavy metal polluted wetlands harbor diverse consortia of arbuscular mycorrhizal fungi.
Identifieur interne : 000D30 ( Main/Exploration ); précédent : 000D29; suivant : 000D31Homogenous stands of a wetland grass living in heavy metal polluted wetlands harbor diverse consortia of arbuscular mycorrhizal fungi.
Auteurs : Yihui Ban [République populaire de Chine] ; Yinghe Jiang [République populaire de Chine] ; Meng Li [République populaire de Chine] ; Xiangling Zhang [République populaire de Chine] ; Shiyang Zhang [République populaire de Chine] ; Yang Wu [République populaire de Chine] ; Zhouying Xu [République populaire de Chine]Source :
- Chemosphere [ 1879-1298 ] ; 2017.
Descripteurs français
- KwdFr :
- ADN fongique (MeSH), Analyse de séquence d'ADN (MeSH), Chine (MeSH), Classification (MeSH), Glomeromycota (classification), Glomeromycota (génétique), Mycorhizes (MeSH), Métaux lourds (MeSH), Poaceae (microbiologie), Pollution de l'environnement (MeSH), Racines de plante (microbiologie), Zones humides (MeSH), Écosystème (MeSH).
- MESH :
- génétique : Glomeromycota.
- microbiologie : Poaceae, Racines de plante.
- ADN fongique, Analyse de séquence d'ADN, Chine, Classification, Glomeromycota, Mycorhizes, Métaux lourds, Pollution de l'environnement, Zones humides, Écosystème.
English descriptors
- KwdEn :
- China (MeSH), Classification (MeSH), DNA, Fungal (MeSH), Ecosystem (MeSH), Environmental Pollution (MeSH), Glomeromycota (classification), Glomeromycota (genetics), Metals, Heavy (MeSH), Mycorrhizae (MeSH), Plant Roots (microbiology), Poaceae (microbiology), Sequence Analysis, DNA (MeSH), Wetlands (MeSH).
- MESH :
- chemical : DNA, Fungal, Metals, Heavy.
- classification : Glomeromycota.
- genetics : Glomeromycota.
- microbiology : Plant Roots, Poaceae.
- China, Classification, Ecosystem, Environmental Pollution, Mycorrhizae, Sequence Analysis, DNA, Wetlands.
Abstract
Over the last three decades, the presence of arbuscular mycorrhizal (AM) fungi in wetland habitats had received increased attention, however, their distribution and functions have not been studied intensively. Using Illumina sequencing technology, we examined the AM fungal communities in roots of Phragmites australis living in 3 heavy metals (HMs) polluted wetlands located in Hubei Province, China. A total of 258 operational taxonomic units (OTUs) from 235,213 sequences affiliated with 6 Glomeromycota families (Glomeraceae, Paraglomeraceae, Claroideoglomeraceae, Ambisporaceae, Archaeosporaceae, and Diversisporaceae) were obtained, with Glomeraceae and Paraglomeraceae being the most and second-most dominant family, respectively. P. australis living in the HMs polluted wetlands harbored diverse AM fungi, including many non-recorded species in upland habitats, and the OTU number which we obtained in this study was higher than most of the records of upland habitats. Dry and waterlogged samples had common OTUs, however, AM fungal communities at different levels in dry and corresponding waterlogged P. australis roots were significant different. In addition, results from this study suggested that a preemption (geometric model) species abundance distributions (SAD), which might due to the distinctive features, e.g. heavy overdominance and difference in the most dominant taxon of each sample, was observed across AM fugal taxa in P. australis roots of the 3 HMs polluted wetlands.
DOI: 10.1016/j.chemosphere.2017.04.135
PubMed: 28477526
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Electronic address: zhouyingxu@126.com.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, Hubei</wicri:regionArea><wicri:noRegion>Hubei</wicri:noRegion></affiliation></author></analytic><series><title level="j">Chemosphere</title><idno type="eISSN">1879-1298</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>China (MeSH)</term><term>Classification (MeSH)</term><term>DNA, Fungal (MeSH)</term><term>Ecosystem (MeSH)</term><term>Environmental Pollution (MeSH)</term><term>Glomeromycota (classification)</term><term>Glomeromycota (genetics)</term><term>Metals, Heavy (MeSH)</term><term>Mycorrhizae (MeSH)</term><term>Plant Roots (microbiology)</term><term>Poaceae (microbiology)</term><term>Sequence Analysis, DNA (MeSH)</term><term>Wetlands (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN fongique (MeSH)</term><term>Analyse de séquence d'ADN (MeSH)</term><term>Chine (MeSH)</term><term>Classification (MeSH)</term><term>Glomeromycota (classification)</term><term>Glomeromycota (génétique)</term><term>Mycorhizes (MeSH)</term><term>Métaux lourds (MeSH)</term><term>Poaceae (microbiologie)</term><term>Pollution de l'environnement (MeSH)</term><term>Racines de plante (microbiologie)</term><term>Zones humides (MeSH)</term><term>Écosystème (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>DNA, Fungal</term><term>Metals, Heavy</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Glomeromycota</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Glomeromycota</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Glomeromycota</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Poaceae</term><term>Racines de plante</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Roots</term><term>Poaceae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>China</term><term>Classification</term><term>Ecosystem</term><term>Environmental Pollution</term><term>Mycorrhizae</term><term>Sequence Analysis, DNA</term><term>Wetlands</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>ADN fongique</term><term>Analyse de séquence d'ADN</term><term>Chine</term><term>Classification</term><term>Glomeromycota</term><term>Mycorhizes</term><term>Métaux lourds</term><term>Pollution de l'environnement</term><term>Zones humides</term><term>Écosystème</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Over the last three decades, the presence of arbuscular mycorrhizal (AM) fungi in wetland habitats had received increased attention, however, their distribution and functions have not been studied intensively. Using Illumina sequencing technology, we examined the AM fungal communities in roots of Phragmites australis living in 3 heavy metals (HMs) polluted wetlands located in Hubei Province, China. A total of 258 operational taxonomic units (OTUs) from 235,213 sequences affiliated with 6 Glomeromycota families (Glomeraceae, Paraglomeraceae, Claroideoglomeraceae, Ambisporaceae, Archaeosporaceae, and Diversisporaceae) were obtained, with Glomeraceae and Paraglomeraceae being the most and second-most dominant family, respectively. P. australis living in the HMs polluted wetlands harbored diverse AM fungi, including many non-recorded species in upland habitats, and the OTU number which we obtained in this study was higher than most of the records of upland habitats. Dry and waterlogged samples had common OTUs, however, AM fungal communities at different levels in dry and corresponding waterlogged P. australis roots were significant different. In addition, results from this study suggested that a preemption (geometric model) species abundance distributions (SAD), which might due to the distinctive features, e.g. heavy overdominance and difference in the most dominant taxon of each sample, was observed across AM fugal taxa in P. australis roots of the 3 HMs polluted wetlands.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">28477526</PMID><DateCompleted><Year>2017</Year><Month>09</Month><Day>22</Day></DateCompleted><DateRevised><Year>2018</Year><Month>12</Month><Day>02</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1879-1298</ISSN><JournalIssue CitedMedium="Internet"><Volume>181</Volume><PubDate><Year>2017</Year><Month>Aug</Month></PubDate></JournalIssue><Title>Chemosphere</Title><ISOAbbreviation>Chemosphere</ISOAbbreviation></Journal><ArticleTitle>Homogenous stands of a wetland grass living in heavy metal polluted wetlands harbor diverse consortia of arbuscular mycorrhizal fungi.</ArticleTitle><Pagination><MedlinePgn>699-709</MedlinePgn></Pagination><ELocationID EIdType="pii" ValidYN="Y">S0045-6535(17)30677-X</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.chemosphere.2017.04.135</ELocationID><Abstract><AbstractText>Over the last three decades, the presence of arbuscular mycorrhizal (AM) fungi in wetland habitats had received increased attention, however, their distribution and functions have not been studied intensively. Using Illumina sequencing technology, we examined the AM fungal communities in roots of Phragmites australis living in 3 heavy metals (HMs) polluted wetlands located in Hubei Province, China. A total of 258 operational taxonomic units (OTUs) from 235,213 sequences affiliated with 6 Glomeromycota families (Glomeraceae, Paraglomeraceae, Claroideoglomeraceae, Ambisporaceae, Archaeosporaceae, and Diversisporaceae) were obtained, with Glomeraceae and Paraglomeraceae being the most and second-most dominant family, respectively. P. australis living in the HMs polluted wetlands harbored diverse AM fungi, including many non-recorded species in upland habitats, and the OTU number which we obtained in this study was higher than most of the records of upland habitats. Dry and waterlogged samples had common OTUs, however, AM fungal communities at different levels in dry and corresponding waterlogged P. australis roots were significant different. In addition, results from this study suggested that a preemption (geometric model) species abundance distributions (SAD), which might due to the distinctive features, e.g. heavy overdominance and difference in the most dominant taxon of each sample, was observed across AM fugal taxa in P. australis roots of the 3 HMs polluted wetlands.</AbstractText><CopyrightInformation>Copyright © 2017 Elsevier Ltd. All rights reserved.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Ban</LastName><ForeName>Yihui</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>School of Chemistry, Chemical Engineering and Life Sciences, Wuhan University of Technology, Wuhan, 430070, Hubei, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jiang</LastName><ForeName>Yinghe</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, Hubei, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Meng</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, Hubei, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Xiangling</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, Hubei, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Shiyang</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, Hubei, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wu</LastName><ForeName>Yang</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, Hubei, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xu</LastName><ForeName>Zhouying</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, Hubei, China. Electronic address: zhouyingxu@126.com.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>04</Month><Day>29</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Chemosphere</MedlineTA><NlmUniqueID>0320657</NlmUniqueID><ISSNLinking>0045-6535</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004271">DNA, Fungal</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D019216">Metals, Heavy</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D002681" MajorTopicYN="N">China</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002965" MajorTopicYN="N">Classification</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004271" MajorTopicYN="N">DNA, Fungal</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017753" MajorTopicYN="N">Ecosystem</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004787" MajorTopicYN="N">Environmental Pollution</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D055137" MajorTopicYN="N">Glomeromycota</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D019216" MajorTopicYN="N">Metals, Heavy</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="Y">Mycorrhizae</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D006109" MajorTopicYN="N">Poaceae</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D053833" MajorTopicYN="Y">Wetlands</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Arbuscular mycorrhizal fungi</Keyword><Keyword MajorTopicYN="N">Community structure</Keyword><Keyword MajorTopicYN="N">Heavy metals</Keyword><Keyword MajorTopicYN="N">Illumina sequencing</Keyword><Keyword MajorTopicYN="N">Species abundance distribution</Keyword><Keyword MajorTopicYN="N">Wetlands</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>10</Month><Day>08</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2017</Year><Month>04</Month><Day>08</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>04</Month><Day>26</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>5</Month><Day>10</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>9</Month><Day>25</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>5</Month><Day>7</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28477526</ArticleId><ArticleId IdType="pii">S0045-6535(17)30677-X</ArticleId><ArticleId IdType="doi">10.1016/j.chemosphere.2017.04.135</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Ban, Yihui" sort="Ban, Yihui" uniqKey="Ban Y" first="Yihui" last="Ban">Yihui Ban</name></noRegion><name sortKey="Jiang, Yinghe" sort="Jiang, Yinghe" uniqKey="Jiang Y" first="Yinghe" last="Jiang">Yinghe Jiang</name><name sortKey="Li, Meng" sort="Li, Meng" uniqKey="Li M" first="Meng" last="Li">Meng Li</name><name sortKey="Wu, Yang" sort="Wu, Yang" uniqKey="Wu Y" first="Yang" last="Wu">Yang Wu</name><name sortKey="Xu, Zhouying" sort="Xu, Zhouying" uniqKey="Xu Z" first="Zhouying" last="Xu">Zhouying Xu</name><name sortKey="Zhang, Shiyang" sort="Zhang, Shiyang" uniqKey="Zhang S" first="Shiyang" last="Zhang">Shiyang Zhang</name><name sortKey="Zhang, Xiangling" sort="Zhang, Xiangling" uniqKey="Zhang X" first="Xiangling" last="Zhang">Xiangling Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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