Dual RNA-seq reveals large-scale non-conserved genotype × genotype-specific genetic reprograming and molecular crosstalk in the mycorrhizal symbiosis.
Identifieur interne : 000586 ( Main/Exploration ); précédent : 000585; suivant : 000587Dual RNA-seq reveals large-scale non-conserved genotype × genotype-specific genetic reprograming and molecular crosstalk in the mycorrhizal symbiosis.
Auteurs : Ivan D. Mateus [Suisse] ; Frédéric G. Masclaux [Suisse] ; Consolée Aletti [Suisse] ; Edward C. Rojas [Suisse] ; Romain Savary [Suisse] ; Cindy Dupuis [Suisse] ; Ian R. Sanders [Suisse]Source :
- The ISME journal [ 1751-7370 ] ; 2019.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Glomeromycota, Manihot, Mycorhizes, Symbiose.
- microbiologie : Manihot.
- Analyse de séquence d'ARN, Génotype, Transcription génétique.
English descriptors
- KwdEn :
- MESH :
- genetics : Glomeromycota, Manihot, Mycorrhizae, Symbiosis.
- microbiology : Manihot.
- Genotype, Sequence Analysis, RNA, Transcription, Genetic.
Abstract
Arbuscular mycorrhizal fungi (AMF) impact plant growth and are a major driver of plant diversity and productivity. We quantified the contribution of intra-specific genetic variability in cassava (Manihot esculenta) and Rhizophagus irregularis to gene reprogramming in symbioses using dual RNA-sequencing. A large number of cassava genes exhibited altered transcriptional responses to the fungus but transcription of most of these plant genes (72%) responded in a different direction or magnitude depending on the plant genotype. Two AMF isolates displayed large differences in their transcription, but the direction and magnitude of the transcriptional responses for a large number of these genes was also strongly influenced by the genotype of the plant host. This indicates that unlike the highly conserved plant genes necessary for the symbiosis establishment, most of the plant and fungal gene transcriptional responses are not conserved and are greatly influenced by plant and fungal genetic differences, even at the within-species level. The transcriptional variability detected allowed us to identify an extensive gene network showing the interplay in plant-fungal reprogramming in the symbiosis. Key genes illustrated that the two organisms jointly program their cytoskeleton organization during growth of the fungus inside roots. Our study reveals that plant and fungal genetic variation has a strong role in shaping the genetic reprograming in response to symbiosis, indicating considerable genotype × genotype interactions in the mycorrhizal symbiosis. Such variation needs to be considered in order to understand the molecular mechanisms between AMF and their plant hosts in natural communities.
DOI: 10.1038/s41396-018-0342-3
PubMed: 30647457
PubMed Central: PMC6474227
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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<term>Glomeromycota (genetics)</term>
<term>Manihot (genetics)</term>
<term>Manihot (microbiology)</term>
<term>Mycorrhizae (genetics)</term>
<term>Sequence Analysis, RNA (MeSH)</term>
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<term>Manihot (microbiologie)</term>
<term>Mycorhizes (génétique)</term>
<term>Symbiose (génétique)</term>
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<front><div type="abstract" xml:lang="en">Arbuscular mycorrhizal fungi (AMF) impact plant growth and are a major driver of plant diversity and productivity. We quantified the contribution of intra-specific genetic variability in cassava (Manihot esculenta) and Rhizophagus irregularis to gene reprogramming in symbioses using dual RNA-sequencing. A large number of cassava genes exhibited altered transcriptional responses to the fungus but transcription of most of these plant genes (72%) responded in a different direction or magnitude depending on the plant genotype. Two AMF isolates displayed large differences in their transcription, but the direction and magnitude of the transcriptional responses for a large number of these genes was also strongly influenced by the genotype of the plant host. This indicates that unlike the highly conserved plant genes necessary for the symbiosis establishment, most of the plant and fungal gene transcriptional responses are not conserved and are greatly influenced by plant and fungal genetic differences, even at the within-species level. The transcriptional variability detected allowed us to identify an extensive gene network showing the interplay in plant-fungal reprogramming in the symbiosis. Key genes illustrated that the two organisms jointly program their cytoskeleton organization during growth of the fungus inside roots. Our study reveals that plant and fungal genetic variation has a strong role in shaping the genetic reprograming in response to symbiosis, indicating considerable genotype × genotype interactions in the mycorrhizal symbiosis. Such variation needs to be considered in order to understand the molecular mechanisms between AMF and their plant hosts in natural communities.</div>
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<Abstract><AbstractText>Arbuscular mycorrhizal fungi (AMF) impact plant growth and are a major driver of plant diversity and productivity. We quantified the contribution of intra-specific genetic variability in cassava (Manihot esculenta) and Rhizophagus irregularis to gene reprogramming in symbioses using dual RNA-sequencing. A large number of cassava genes exhibited altered transcriptional responses to the fungus but transcription of most of these plant genes (72%) responded in a different direction or magnitude depending on the plant genotype. Two AMF isolates displayed large differences in their transcription, but the direction and magnitude of the transcriptional responses for a large number of these genes was also strongly influenced by the genotype of the plant host. This indicates that unlike the highly conserved plant genes necessary for the symbiosis establishment, most of the plant and fungal gene transcriptional responses are not conserved and are greatly influenced by plant and fungal genetic differences, even at the within-species level. The transcriptional variability detected allowed us to identify an extensive gene network showing the interplay in plant-fungal reprogramming in the symbiosis. Key genes illustrated that the two organisms jointly program their cytoskeleton organization during growth of the fungus inside roots. Our study reveals that plant and fungal genetic variation has a strong role in shaping the genetic reprograming in response to symbiosis, indicating considerable genotype × genotype interactions in the mycorrhizal symbiosis. Such variation needs to be considered in order to understand the molecular mechanisms between AMF and their plant hosts in natural communities.</AbstractText>
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<ForeName>Ivan D</ForeName>
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<ForeName>Consolée</ForeName>
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<AffiliationInfo><Affiliation>Department of Ecology and Evolution, University of Lausanne, Biophore Building, 1015, Lausanne, Switzerland.</Affiliation>
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<MeshHeading><DescriptorName UI="D002365" MajorTopicYN="N">Manihot</DescriptorName>
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<ReferenceList><Reference><Citation>New Phytol. 2017 May;214(3):1330-1337</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28186629</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Curr Opin Plant Biol. 2007 Aug;10(4):393-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17658291</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Biotechnol. 2016 May;34(5):562-70</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27088722</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2016 Dec;10(12):2780-2786</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27128992</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ann Bot. 2009 Dec;104(7):1263-80</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19815570</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Negl Trop Dis. 2014 May 22;8(5):e2905</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24853112</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Planta. 2009 Apr;229(5):1023-34</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19169704</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ecol Lett. 2006 Feb;9(2):103-10</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16958874</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2012 Apr;194(2):536-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22269207</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Genet. 2014 Jul 17;10(7):e1004487</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25032823</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2012 Feb;193(3):755-69</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22092242</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Genomics. 2013 May 07;14:306</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23647797</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mycorrhiza. 2015 Oct;25(7):533-46</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25708401</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2005 Apr;137(4):1283-301</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15778460</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Curr Opin Plant Biol. 2009 Aug;12(4):421-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19608449</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2018 May;94(3):411-425</Citation>
<ArticleIdList><ArticleId IdType="pubmed">29570877</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2014 Sep;166(1):281-92</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25096975</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Microbiol. 2016 Mar 21;1(6):16033</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27572831</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Plant Microbe Interact. 2010 Jan;23(1):67-81</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19958140</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Brief Funct Genomics. 2018 Jul 1;17(4):240-245</Citation>
<ArticleIdList><ArticleId IdType="pubmed">29236955</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Plant Sci. 2013 Jun;18(6):298-304</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23462549</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Plant Physiol. 2005 Jun;162(6):634-49</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16008086</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2015 Mar 02;10(3):e0118731</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25730421</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Oecologia. 1993 May;94(2):229-234</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28314036</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Signal Behav. 2008 Oct;3(10):831-3</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19704513</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Rev Microbiol. 2012 Sep;10(9):618-30</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22890146</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2015 Nov 24;10(11):e0143128</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26599013</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Protoplasma. 2001;217(4):154-65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11732307</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2010 Feb;185(3):716-33</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20003073</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2016 Oct;10(10):2514-26</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26953600</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Front Microbiol. 2017 Jul 21;8:1403</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28785256</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Curr Biol. 2010 Jul 13;20(13):1216-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20541408</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2013 Dec 10;110(50):20117-22</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24277808</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Cell Dev Biol. 2013;29:593-617</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24099088</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 1995 May;108(1):7-15</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12228450</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Bioinformatics. 2008 Dec 29;9:559</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19114008</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2014 Feb;8(2):284-94</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24030596</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2009 Oct;184(2):412-23</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19674324</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2009 Oct;184(2):424-37</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19558424</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Eur J Histochem. 1999;43(2):105-11</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10439213</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2013 Aug 07;8(8):e70633</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23950975</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2015 Aug 28;349(6251):970-3</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26315436</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
<affiliations><list><country><li>Suisse</li>
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<region><li>Canton de Vaud</li>
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<tree><country name="Suisse"><region name="Canton de Vaud"><name sortKey="Mateus, Ivan D" sort="Mateus, Ivan D" uniqKey="Mateus I" first="Ivan D" last="Mateus">Ivan D. Mateus</name>
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<name sortKey="Aletti, Consolee" sort="Aletti, Consolee" uniqKey="Aletti C" first="Consolée" last="Aletti">Consolée Aletti</name>
<name sortKey="Dupuis, Cindy" sort="Dupuis, Cindy" uniqKey="Dupuis C" first="Cindy" last="Dupuis">Cindy Dupuis</name>
<name sortKey="Masclaux, Frederic G" sort="Masclaux, Frederic G" uniqKey="Masclaux F" first="Frédéric G" last="Masclaux">Frédéric G. Masclaux</name>
<name sortKey="Masclaux, Frederic G" sort="Masclaux, Frederic G" uniqKey="Masclaux F" first="Frédéric G" last="Masclaux">Frédéric G. Masclaux</name>
<name sortKey="Rojas, Edward C" sort="Rojas, Edward C" uniqKey="Rojas E" first="Edward C" last="Rojas">Edward C. Rojas</name>
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