Tuber magnatum Pico, a species of limited geographical distribution: its genetic diversity inside and outside a truffle ground.
Identifieur interne : 003633 ( Main/Curation ); précédent : 003632; suivant : 003634Tuber magnatum Pico, a species of limited geographical distribution: its genetic diversity inside and outside a truffle ground.
Auteurs : Antonietta Mello [Italie] ; Claude Murat ; Alfredo Vizzini ; Virgilio Gavazza ; Paola BonfanteSource :
- Environmental microbiology [ 1462-2912 ] ; 2005.
Descripteurs français
- KwdFr :
- ADN fongique (analyse), Analyse de séquence d'ADN (MeSH), Ascomycota (classification), Ascomycota (croissance et développement), Ascomycota (génétique), Données de séquences moléculaires (MeSH), Espaceur de l'ADN ribosomique (analyse), Microbiologie du sol (MeSH), Mycorhizes (MeSH), Populus (microbiologie), Quercus (microbiologie), Réaction de polymérisation en chaîne (MeSH), Techniques de typage mycologique (MeSH), Tubuline (génétique), Variation génétique (MeSH).
- MESH :
- analyse : ADN fongique, Espaceur de l'ADN ribosomique.
- croissance et développement : Ascomycota.
- génétique : Ascomycota, Tubuline.
- microbiologie : Populus, Quercus.
- classification : Analyse de séquence d'ADN, Ascomycota, Données de séquences moléculaires, Microbiologie du sol, Mycorhizes, Réaction de polymérisation en chaîne, Techniques de typage mycologique, Variation génétique.
English descriptors
- KwdEn :
- Ascomycota (classification), Ascomycota (genetics), Ascomycota (growth & development), DNA, Fungal (analysis), DNA, Ribosomal Spacer (analysis), Genetic Variation (MeSH), Molecular Sequence Data (MeSH), Mycological Typing Techniques (MeSH), Mycorrhizae (MeSH), Polymerase Chain Reaction (MeSH), Populus (microbiology), Quercus (microbiology), Sequence Analysis, DNA (MeSH), Soil Microbiology (MeSH), Tubulin (genetics).
- MESH :
- chemical , analysis : DNA, Fungal, DNA, Ribosomal Spacer.
- classification : Ascomycota.
- genetics : Ascomycota, Tubulin.
- growth & development : Ascomycota.
- microbiology : Populus, Quercus.
- Genetic Variation, Molecular Sequence Data, Mycological Typing Techniques, Mycorrhizae, Polymerase Chain Reaction, Sequence Analysis, DNA, Soil Microbiology.
Abstract
The aim of this work was to clarify the genetic structure of the ectomycorrhizal fungus, Tuber magnatum Pico, in a natural truffle ground located in north Italy. Ascomata of this population of T. magnatum were collected over a period of up to 5 years. For comparative analysis, T. magnatum fruit bodies of different geographical origin were also considered. We used single locus markers, such as the variable region of ribosomal genes (ITS), the beta-tubulin gene and sequence-characterized amplified regions (SCAR), as tools to identify single-nucleotide polymorphisms (SNPs). On the basis of the molecular results, which were indirectly supported by a karyological analysis, a self-fertilization mechanism is suggested. A SCAR region was polymorphic within the samples of the truffle ground, leading to the identification of two genotypes. In addition, both the SCAR and the ITS proved to be polymorphic among samples coming from different geographical regions, revealing a genetic differentiation in T. magnatum.
DOI: 10.1111/j.1462-2920.2004.00678.x
PubMed: 15643936
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Ascomata of this population of T. magnatum were collected over a period of up to 5 years. For comparative analysis, T. magnatum fruit bodies of different geographical origin were also considered. We used single locus markers, such as the variable region of ribosomal genes (ITS), the beta-tubulin gene and sequence-characterized amplified regions (SCAR), as tools to identify single-nucleotide polymorphisms (SNPs). On the basis of the molecular results, which were indirectly supported by a karyological analysis, a self-fertilization mechanism is suggested. A SCAR region was polymorphic within the samples of the truffle ground, leading to the identification of two genotypes. In addition, both the SCAR and the ITS proved to be polymorphic among samples coming from different geographical regions, revealing a genetic differentiation in T. magnatum.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">15643936</PMID><DateCompleted><Year>2005</Year><Month>03</Month><Day>15</Day></DateCompleted><DateRevised><Year>2008</Year><Month>11</Month><Day>21</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">1462-2912</ISSN><JournalIssue CitedMedium="Print"><Volume>7</Volume><Issue>1</Issue><PubDate><Year>2005</Year><Month>Jan</Month></PubDate></JournalIssue><Title>Environmental microbiology</Title><ISOAbbreviation>Environ Microbiol</ISOAbbreviation></Journal><ArticleTitle>Tuber magnatum Pico, a species of limited geographical distribution: its genetic diversity inside and outside a truffle ground.</ArticleTitle><Pagination><MedlinePgn>55-65</MedlinePgn></Pagination><Abstract><AbstractText>The aim of this work was to clarify the genetic structure of the ectomycorrhizal fungus, Tuber magnatum Pico, in a natural truffle ground located in north Italy. Ascomata of this population of T. magnatum were collected over a period of up to 5 years. For comparative analysis, T. magnatum fruit bodies of different geographical origin were also considered. We used single locus markers, such as the variable region of ribosomal genes (ITS), the beta-tubulin gene and sequence-characterized amplified regions (SCAR), as tools to identify single-nucleotide polymorphisms (SNPs). On the basis of the molecular results, which were indirectly supported by a karyological analysis, a self-fertilization mechanism is suggested. A SCAR region was polymorphic within the samples of the truffle ground, leading to the identification of two genotypes. 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