Temperature niche position and breadth of ectomycorrhizal fungi: Reduced diversity under warming predicted by a nested community structure.
Identifieur interne : 000746 ( Main/Curation ); précédent : 000745; suivant : 000747Temperature niche position and breadth of ectomycorrhizal fungi: Reduced diversity under warming predicted by a nested community structure.
Auteurs : Yumiko Miyamoto [Japon] ; Yoshie Terashima [Japon] ; Kazuhide Nara [Japon]Source :
- Global change biology [ 1365-2486 ] ; 2018.
Descripteurs français
- KwdFr :
- MESH :
- physiologie : Mycorhizes.
- Arbres, Biodiversité, Forêts, Japon, Microbiologie du sol, Modèles biologiques, Réchauffement de la planète, Sol, Température.
- Wicri :
- geographic : Japon.
English descriptors
- KwdEn :
- MESH :
- chemical : Soil.
- geographic : Japan.
- physiology : Mycorrhizae.
- Biodiversity, Forests, Global Warming, Models, Biological, Soil Microbiology, Temperature, Trees.
Abstract
Species with narrow niche breadths are assumed to be more susceptible to environmental changes than those with wide niche breadths. Although information on niche properties is necessary for predicting biological responses to environmental changes, such information is largely missing for soil microbes. In this study, we present the temperature niche positions and breadths of a functionally important group of eukaryotic soil microbes, ectomycorrhizal (EM) fungi. We compiled high-quality EM fungal sequence data from 26 forested sites in Japan (with mean annual temperatures ranging from 1.6 to 23.6°C) to create temperature niche profiles for each individual fungal species. Nested theory and a newly developed weighted-randomization null model were applied to 75 fungal operational taxonomic units (OTUs) with high occurrence records to examine potential preferences for certain temperature positions and breadths. Our analyses revealed that (a) many EM fungal OTUs were restricted to habitats with low mean annual temperatures, (b) fungal OTUs observed at colder sites exhibited narrower temperature breadths than expected by chance, (c) the composition of EM fungal OTUs exhibited a nested pattern along the temperature gradient, and (d) EM fungal richness was highest at colder sites, where the greatest degree of overlap in OTU occurrence was observed. These findings imply that future warming may limit the distribution of many EM fungal species that are currently adapted to only cold climates. This could eventually reduce EM fungal biodiversity, which is linked to forest function through symbiotic associations with trees. This study demonstrates the distribution and environmental ranges of various EM fungal species and can contribute to develop species distribution models with the aim of conserving microbes in the face of climate change.
DOI: 10.1111/gcb.14446
PubMed: 30218546
Links toward previous steps (curation, corpus...)
- to stream Main, to step Corpus: Pour aller vers cette notice dans l'étape Curation :000746
Links to Exploration step
pubmed:30218546Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Temperature niche position and breadth of ectomycorrhizal fungi: Reduced diversity under warming predicted by a nested community structure.</title><author><name sortKey="Miyamoto, Yumiko" sort="Miyamoto, Yumiko" uniqKey="Miyamoto Y" first="Yumiko" last="Miyamoto">Yumiko Miyamoto</name><affiliation wicri:level="1"><nlm:affiliation>Arctic Research Center, Hokkaido University, Kita-ku, Sapporo, Hokkaido, Japan.</nlm:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Arctic Research Center, Hokkaido University, Kita-ku, Sapporo, Hokkaido</wicri:regionArea></affiliation></author><author><name sortKey="Terashima, Yoshie" sort="Terashima, Yoshie" uniqKey="Terashima Y" first="Yoshie" last="Terashima">Yoshie Terashima</name><affiliation wicri:level="1"><nlm:affiliation>Tropical Biosphere Research Center, University of the Ryukyus, Nishihara-cho, Nakagami-gun, Okinawa, Japan.</nlm:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Tropical Biosphere Research Center, University of the Ryukyus, Nishihara-cho, Nakagami-gun, Okinawa</wicri:regionArea></affiliation></author><author><name sortKey="Nara, Kazuhide" sort="Nara, Kazuhide" uniqKey="Nara K" first="Kazuhide" last="Nara">Kazuhide Nara</name><affiliation wicri:level="1"><nlm:affiliation>Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa-shi, Chiba, Japan.</nlm:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa-shi, Chiba</wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2018">2018</date><idno type="RBID">pubmed:30218546</idno><idno type="pmid">30218546</idno><idno type="doi">10.1111/gcb.14446</idno><idno type="wicri:Area/Main/Corpus">000746</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000746</idno><idno type="wicri:Area/Main/Curation">000746</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000746</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Temperature niche position and breadth of ectomycorrhizal fungi: Reduced diversity under warming predicted by a nested community structure.</title><author><name sortKey="Miyamoto, Yumiko" sort="Miyamoto, Yumiko" uniqKey="Miyamoto Y" first="Yumiko" last="Miyamoto">Yumiko Miyamoto</name><affiliation wicri:level="1"><nlm:affiliation>Arctic Research Center, Hokkaido University, Kita-ku, Sapporo, Hokkaido, Japan.</nlm:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Arctic Research Center, Hokkaido University, Kita-ku, Sapporo, Hokkaido</wicri:regionArea></affiliation></author><author><name sortKey="Terashima, Yoshie" sort="Terashima, Yoshie" uniqKey="Terashima Y" first="Yoshie" last="Terashima">Yoshie Terashima</name><affiliation wicri:level="1"><nlm:affiliation>Tropical Biosphere Research Center, University of the Ryukyus, Nishihara-cho, Nakagami-gun, Okinawa, Japan.</nlm:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Tropical Biosphere Research Center, University of the Ryukyus, Nishihara-cho, Nakagami-gun, Okinawa</wicri:regionArea></affiliation></author><author><name sortKey="Nara, Kazuhide" sort="Nara, Kazuhide" uniqKey="Nara K" first="Kazuhide" last="Nara">Kazuhide Nara</name><affiliation wicri:level="1"><nlm:affiliation>Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa-shi, Chiba, Japan.</nlm:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa-shi, Chiba</wicri:regionArea></affiliation></author></analytic><series><title level="j">Global change biology</title><idno type="eISSN">1365-2486</idno><imprint><date when="2018" type="published">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Biodiversity (MeSH)</term><term>Forests (MeSH)</term><term>Global Warming (MeSH)</term><term>Japan (MeSH)</term><term>Models, Biological (MeSH)</term><term>Mycorrhizae (physiology)</term><term>Soil (MeSH)</term><term>Soil Microbiology (MeSH)</term><term>Temperature (MeSH)</term><term>Trees (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Arbres (MeSH)</term><term>Biodiversité (MeSH)</term><term>Forêts (MeSH)</term><term>Japon (MeSH)</term><term>Microbiologie du sol (MeSH)</term><term>Modèles biologiques (MeSH)</term><term>Mycorhizes (physiologie)</term><term>Réchauffement de la planète (MeSH)</term><term>Sol (MeSH)</term><term>Température (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>Soil</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Japan</term></keywords><keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Mycorhizes</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Biodiversity</term><term>Forests</term><term>Global Warming</term><term>Models, Biological</term><term>Soil Microbiology</term><term>Temperature</term><term>Trees</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Arbres</term><term>Biodiversité</term><term>Forêts</term><term>Japon</term><term>Microbiologie du sol</term><term>Modèles biologiques</term><term>Réchauffement de la planète</term><term>Sol</term><term>Température</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Japon</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Species with narrow niche breadths are assumed to be more susceptible to environmental changes than those with wide niche breadths. Although information on niche properties is necessary for predicting biological responses to environmental changes, such information is largely missing for soil microbes. In this study, we present the temperature niche positions and breadths of a functionally important group of eukaryotic soil microbes, ectomycorrhizal (EM) fungi. We compiled high-quality EM fungal sequence data from 26 forested sites in Japan (with mean annual temperatures ranging from 1.6 to 23.6°C) to create temperature niche profiles for each individual fungal species. Nested theory and a newly developed weighted-randomization null model were applied to 75 fungal operational taxonomic units (OTUs) with high occurrence records to examine potential preferences for certain temperature positions and breadths. Our analyses revealed that (a) many EM fungal OTUs were restricted to habitats with low mean annual temperatures, (b) fungal OTUs observed at colder sites exhibited narrower temperature breadths than expected by chance, (c) the composition of EM fungal OTUs exhibited a nested pattern along the temperature gradient, and (d) EM fungal richness was highest at colder sites, where the greatest degree of overlap in OTU occurrence was observed. These findings imply that future warming may limit the distribution of many EM fungal species that are currently adapted to only cold climates. This could eventually reduce EM fungal biodiversity, which is linked to forest function through symbiotic associations with trees. This study demonstrates the distribution and environmental ranges of various EM fungal species and can contribute to develop species distribution models with the aim of conserving microbes in the face of climate change.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">30218546</PMID><DateCompleted><Year>2019</Year><Month>03</Month><Day>04</Day></DateCompleted><DateRevised><Year>2019</Year><Month>03</Month><Day>04</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1365-2486</ISSN><JournalIssue CitedMedium="Internet"><Volume>24</Volume><Issue>12</Issue><PubDate><Year>2018</Year><Month>12</Month></PubDate></JournalIssue><Title>Global change biology</Title><ISOAbbreviation>Glob Chang Biol</ISOAbbreviation></Journal><ArticleTitle>Temperature niche position and breadth of ectomycorrhizal fungi: Reduced diversity under warming predicted by a nested community structure.</ArticleTitle><Pagination><MedlinePgn>5724-5737</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/gcb.14446</ELocationID><Abstract><AbstractText>Species with narrow niche breadths are assumed to be more susceptible to environmental changes than those with wide niche breadths. Although information on niche properties is necessary for predicting biological responses to environmental changes, such information is largely missing for soil microbes. In this study, we present the temperature niche positions and breadths of a functionally important group of eukaryotic soil microbes, ectomycorrhizal (EM) fungi. We compiled high-quality EM fungal sequence data from 26 forested sites in Japan (with mean annual temperatures ranging from 1.6 to 23.6°C) to create temperature niche profiles for each individual fungal species. Nested theory and a newly developed weighted-randomization null model were applied to 75 fungal operational taxonomic units (OTUs) with high occurrence records to examine potential preferences for certain temperature positions and breadths. Our analyses revealed that (a) many EM fungal OTUs were restricted to habitats with low mean annual temperatures, (b) fungal OTUs observed at colder sites exhibited narrower temperature breadths than expected by chance, (c) the composition of EM fungal OTUs exhibited a nested pattern along the temperature gradient, and (d) EM fungal richness was highest at colder sites, where the greatest degree of overlap in OTU occurrence was observed. These findings imply that future warming may limit the distribution of many EM fungal species that are currently adapted to only cold climates. This could eventually reduce EM fungal biodiversity, which is linked to forest function through symbiotic associations with trees. This study demonstrates the distribution and environmental ranges of various EM fungal species and can contribute to develop species distribution models with the aim of conserving microbes in the face of climate change.</AbstractText><CopyrightInformation>© 2018 John Wiley & Sons Ltd.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Miyamoto</LastName><ForeName>Yumiko</ForeName><Initials>Y</Initials><Identifier Source="ORCID">0000-0002-3149-407X</Identifier><AffiliationInfo><Affiliation>Arctic Research Center, Hokkaido University, Kita-ku, Sapporo, Hokkaido, Japan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Terashima</LastName><ForeName>Yoshie</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Tropical Biosphere Research Center, University of the Ryukyus, Nishihara-cho, Nakagami-gun, Okinawa, Japan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Nara</LastName><ForeName>Kazuhide</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa-shi, Chiba, Japan.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2018</Year><Month>10</Month><Day>07</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Glob Chang Biol</MedlineTA><NlmUniqueID>9888746</NlmUniqueID><ISSNLinking>1354-1013</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012987">Soil</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D044822" MajorTopicYN="Y">Biodiversity</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D065928" MajorTopicYN="N">Forests</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D057232" MajorTopicYN="Y">Global Warming</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D007564" MajorTopicYN="N" Type="Geographic">Japan</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008954" MajorTopicYN="N">Models, Biological</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012987" MajorTopicYN="N">Soil</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012988" MajorTopicYN="N">Soil Microbiology</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013696" MajorTopicYN="N">Temperature</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014197" MajorTopicYN="N">Trees</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">biodiversity</Keyword><Keyword MajorTopicYN="Y">boreal</Keyword><Keyword MajorTopicYN="Y">climate change</Keyword><Keyword MajorTopicYN="Y">geographic range</Keyword><Keyword MajorTopicYN="Y">nestedness</Keyword><Keyword MajorTopicYN="Y">randomization</Keyword><Keyword MajorTopicYN="Y">species-specific</Keyword><Keyword MajorTopicYN="Y">subtropical</Keyword><Keyword MajorTopicYN="Y">symbiotic fungi</Keyword><Keyword MajorTopicYN="Y">temperate</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2018</Year><Month>02</Month><Day>16</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2018</Year><Month>08</Month><Day>23</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2018</Year><Month>09</Month><Day>07</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2018</Year><Month>9</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2019</Year><Month>3</Month><Day>5</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2018</Year><Month>9</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">30218546</ArticleId><ArticleId IdType="doi">10.1111/gcb.14446</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/MycorrhizaeV1/Data/Main/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000746 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Curation/biblio.hfd -nk 000746 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= MycorrhizaeV1
|flux= Main
|étape= Curation
|type= RBID
|clé= pubmed:30218546
|texte= Temperature niche position and breadth of ectomycorrhizal fungi: Reduced diversity under warming predicted by a nested community structure.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Curation/RBID.i -Sk "pubmed:30218546" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Curation/biblio.hfd \
| NlmPubMed2Wicri -a MycorrhizaeV1
| This area was generated with Dilib version V0.6.37. |  |